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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000079_pilon:43447..46301+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11041.4.p1 ID=MSTRG.11041.4.p1|Name=MSTRG.11041.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2855bp|location=Sequence derived from alignment at sc0000079_pilon:43447..46301+ (Clytia hemisphaerica_ch_hm2_pilon)
gtaaaatagaaaaaattaaataaacaaacaaataaagaaTGCTACCTTGG
ATCCAGCCTTTTTTAAAGCGACCACAGTCAATCATGAACATGTGCAGAGC
TTGTTATTCATCAACAAACTTTCCAACAACATGCCCTGGTGCAAATTATT
TCAAAGAAGGCGAAGAAACCCAGTTAAAACCCGATTCGGAATACCCGGAT
TGGTTGTGGACCCTGGGTGGCCCTAAACGTGAATTCAAAGACATGTCACC
CGAGGTTGATGggaaagcatttttcaaaagagaacgaaaaatgaaaattc
gagagcAGAATATGATtcgtaaacaaagaagattttaatgtgtttgaaaa
ttctttttttgtggatgttgtatatttttcatatttttagatcctttttt
tataatttccatGTAACTACAAGAGCTATTACATTAAAAGTTTTGCCTCA
AAGATTGCTTGCATTTTTACGGCTAGTATTGCATAAGTGTCTTCGATTTC
AAAGAAGTTGCCTTTGGATAATTTTTTCATCGCTTATGAAATGTGGTTTA
AATTGTTGAAGTTCTATGGCTCTTATAATTATAGTGGTTCAACTCTCTGC
ACTCTGTAGGGAAACTCAACATCATTTTCTTCGCCAATTACTGATCATAA
ATTCAAACCTTTTTTATTGGGTTATTTATTTTCAGTTAAATAAAAATGGA
AGTCAAGATTGAAGATGAGATACAGAATGACCCATCACGTTTCAAAAAAG
TCACAACCAAAAGGCTTGTCTTTATCGAATACCCTGGGTTCATAAAGAAT
GTAGACAAAATGCTGGCAACCCTGGGTggtgaagaaaaaatttctgaaac
ttATCGGAGCGGTAAACAACGTCTTCAAATGACGTATCGACCTGAAGATT
TAAATGCTCATAACGCATGCGCCGATTTGCTACCATTTACTGGTTTATTA
TTAAAAGTACGGCGCCGAAGAAAGAAAGGAACTGATGAATTCGAATACGA
ACAAGACATTGTAGGTATATCACGTGATCGTTATCGGTTTCAGACTCTCA
TGGACTATCAATATTTGACACCTGAACCGCTATGGAATTATTTTAAATCA
ATTCATACTAGTGAGCTAGGGAACACTGACTTTCCACCTTATTTTGCACC
GCCTGTCTTCGCGAGACTCGATTCCGCTGGAGTTTACCAATACAAACCGG
ATCTAGTTACCGGGATTAAAACAGTTGCTAAAGCGCCGGAAATCGGTATT
GATTCTATACGGAAGCGTCGTCATACAGAGTCTATGGCTGCCCTTTATTC
AAGTGCAGATGTGCCAAGTAAACCTACAGAAAAAGCTTGTAccattattg
aaaatttgaataaaggtCCAGATGCGGATGCAATAAAACAACTCGAACTT
ATGTTTAACGAGAGACCGTTATGGTCCAAGCTTGCAATATCATGTTTGGT
GGATGTCACTCCTGAGCGATTGAAGAAAGTCTTACAGTATTTTGCTTATT
ACTGGTTAAGTGGACCTTGGAGGACCCTTTGGTGTCGCATGGGCTACGAC
CCGAGAAAAGATCCGAAAGCTAAACGTTATCAAATGGTTGAGTTTCGTTT
GAGACGATCAAAAGAGAATAAGAAATGCTATAAGATGATGGTACCCGCTC
GAAGATCCAATAAAGATTACTTAcctcgtaatttgagaaatattgTGTCC
AGGGCACCGGCCTCAAAGTCAGTCCTCGCCGCCTGTAATGAGCCAGAGAA
CAAAGAAGAAGGTGATAAAGAACCGTATATTTTTCATCCAAATAAAATGA
TTCATTCGCGGAGTATGATGTTACAATTGTGTGATATTCACGATCCAGCT
GTTCAGAAAATCATCGTTGAGAATGACGGTATGGAAACCAGGTGCGATGA
GAGAGAGGGATGGTTTCCACAAGGTACAATGGGACGGATCCGTAACGAGA
TGACGAAAACGGTTGACGCCTATTTTGAGAGGCAATACGAgaaacaaaaa
tctgaaaatctcaGCAGTGATAAAACTGGTGGCGGTGAAGCAGGCGTTCA
TTCTGATGTACAGGGTGAAGGAGGCGGTGTCAAAGAGGAAGAGAGGTTCC
GTGAAGGAGCGCTTTACGACGAAGACATGTACGAACGAGACACGGAACCG
CCCTCCTCCACACAGATGTTAAGCTACACACAAATGTTACAAGGTGATGA
TGATTATAGTATGGATACTGGCCAATTCTATGATGAAGAAGAATTTAATG
TTTATGCTTGAGAATTGAAAATCATAAATTCTCTTCGGATTTGATCACAC
CTTTTTTGCGCTAGATAAGGGCCCTAAGTTTTATTAAGAGGATTAAGAGA
ATTTGGTTCGAATTTActgtggagtctccataactcgaacacgcatgggg
aaacacaaatttgttcgagttaaggatatttcaaattatggagtaagatt
tataagcattgttaactaaagggaccAAAACCtgtttcgagttaaagagg
ctCCACTGTATCTAATAGTTCTATATATGATCTTTTCAACGCGATGACTT
TAGACATATGATGCTTTGTCTCTTGTTAAGTCGAACCCAAACTGTGTGTA
GCTAGCATGTGACCATGAAATGTGACGCCCTCAGCAATCTTGTATTTTCA
TTAACTTTGTAAGTCACTATTATTGCTAGGATTTGAACCTAATTGTACAC
ATATACAAAATACTCTATTGTACACGGTTTGATGGTAGTCTGTTCCTTTC
TTATCCTATTTTACAGTCTGTTCCTGTAAAGAATCCTGCAtaattgtaac
acgcatgcgttcTGTCTCTTTTAACCATATgtagttattctttgtattat
taaac Coding sequence (CDS) from alignment at sc0000079_pilon:43447..46301+ >MSTRG.11041.4.p1 ID=MSTRG.11041.4.p1|Name=MSTRG.11041.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1566bp|location=Sequence derived from alignment at sc0000079_pilon:43447..46301+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTCAAGATTGAAGATGAGATACAGAATGACCCATCACGTTTCAA
AAAAGTCACAACCAAAAGGCTTGTCTTTATCGAATACCCTGGGTTCATAA
AGAATGTAGACAAAATGCTGGCAACCCTGGGTggtgaagaaaaaatttct
gaaacttATCGGAGCGGTAAACAACGTCTTCAAATGACGTATCGACCTGA
AGATTTAAATGCTCATAACGCATGCGCCGATTTGCTACCATTTACTGGTT
TATTATTAAAAGTACGGCGCCGAAGAAAGAAAGGAACTGATGAATTCGAA
TACGAACAAGACATTGTAGGTATATCACGTGATCGTTATCGGTTTCAGAC
TCTCATGGACTATCAATATTTGACACCTGAACCGCTATGGAATTATTTTA
AATCAATTCATACTAGTGAGCTAGGGAACACTGACTTTCCACCTTATTTT
GCACCGCCTGTCTTCGCGAGACTCGATTCCGCTGGAGTTTACCAATACAA
ACCGGATCTAGTTACCGGGATTAAAACAGTTGCTAAAGCGCCGGAAATCG
GTATTGATTCTATACGGAAGCGTCGTCATACAGAGTCTATGGCTGCCCTT
TATTCAAGTGCAGATGTGCCAAGTAAACCTACAGAAAAAGCTTGTAccat
tattgaaaatttgaataaaggtCCAGATGCGGATGCAATAAAACAACTCG
AACTTATGTTTAACGAGAGACCGTTATGGTCCAAGCTTGCAATATCATGT
TTGGTGGATGTCACTCCTGAGCGATTGAAGAAAGTCTTACAGTATTTTGC
TTATTACTGGTTAAGTGGACCTTGGAGGACCCTTTGGTGTCGCATGGGCT
ACGACCCGAGAAAAGATCCGAAAGCTAAACGTTATCAAATGGTTGAGTTT
CGTTTGAGACGATCAAAAGAGAATAAGAAATGCTATAAGATGATGGTACC
CGCTCGAAGATCCAATAAAGATTACTTAcctcgtaatttgagaaatattg
TGTCCAGGGCACCGGCCTCAAAGTCAGTCCTCGCCGCCTGTAATGAGCCA
GAGAACAAAGAAGAAGGTGATAAAGAACCGTATATTTTTCATCCAAATAA
AATGATTCATTCGCGGAGTATGATGTTACAATTGTGTGATATTCACGATC
CAGCTGTTCAGAAAATCATCGTTGAGAATGACGGTATGGAAACCAGGTGC
GATGAGAGAGAGGGATGGTTTCCACAAGGTACAATGGGACGGATCCGTAA
CGAGATGACGAAAACGGTTGACGCCTATTTTGAGAGGCAATACGAgaaac
aaaaatctgaaaatctcaGCAGTGATAAAACTGGTGGCGGTGAAGCAGGC
GTTCATTCTGATGTACAGGGTGAAGGAGGCGGTGTCAAAGAGGAAGAGAG
GTTCCGTGAAGGAGCGCTTTACGACGAAGACATGTACGAACGAGACACGG
AACCGCCCTCCTCCACACAGATGTTAAGCTACACACAAATGTTACAAGGT
GATGATGATTATAGTATGGATACTGGCCAATTCTATGATGAAGAAGAATT
TAATGTTTATGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079_pilon | genome | sc0000079_pilon:43447..46301 + |
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