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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1292932..1301035- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11029.2.p1 ID=MSTRG.11029.2.p1|Name=MSTRG.11029.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8104bp|location=Sequence derived from alignment at sc0000078_pilon:1292932..1301035- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCGATGTCGTTCACATTCTACCTTAATCATATCGAGAATAGGATAGGA
TTAAAAAACAGATTGTAAAAAGCGAGGAAGAAGAAGAAATCAGAAAGTTT
TAAAAAAGGAAAAGAGGATACAGTGGTATTATCACACTTTTCAATGTTGG
AAGAACATATATCAATTCTAAGCTCAGCCATCAGAGGAAAGATACAATTG
TAAACATCGAAATTACAACATCACATAACATTCCATAAAAAGAAGAGTTA
AGGACTGTTACCGACGCTGTCAGAAAATTTAAAACTATAAAACTGTCAAC
TACAAAAGTTTACTGTTTTGAAGTAAATGGTACAATAATCTTCGATTGTC
GGTGATTTGTTAGAAGTTTGAATAGAGGGACTTAAATTATTCTGAATAAG
AGCTTTCTGCAAGATGAACACAATGGTTGTATCTTCGGAGAGCTGTCCAA
AATCAATGATTTCGATCATCGTCAAACGTACAAACACAGATAAATATTGG
TCCAAAGATTTTAAGAAACAAAAGGGTAAGGAGAGTTATTTAAAGTGTTT
TCAATGATGATTTACCAAGGAAAAGGAAAAATTTTGTAAGCATGGGTTCT
TCCAGAAAATGTTCGTATATGGGGGGTGGAGGATATAGTGTAGTAAAATA
ATCTACAAAATCTTTCTTGCCCGGGGGTAAACCTGCTACTGTTTGGGGGT
AATTTTGCTCTGTTTGAGGGTAATTTTGAGTGTCCAGGGGGTCGATTAAT
GCTTGTCCAGGGGATTAGACCTGCTGTCCGGGGGTCAAAAGTCATAATGT
CCGGGAGGTAAATTTCCAAAAAAATGTTATATCCTCCATCCCCCATATTC
AATTTTTTCTGGAAAAGCCCCATTGAGTTCTAGTGAGAGCTTTTGGCCTT
TAGAGATTTTAGGGTTTAAATGTAACTATAGGTATTCAAAATATCTTGCT
CTCGTTTTCCTTTGGGAATAAATAGATAGATATAGCCGATATCGATATTT
TACATAGATAGCCCAGTACTATAGAATTTTGAAGCAGTCGATCGCTTTCA
CGTGGTCCACGATCAGCCAGGGATAGAACATGGGAATGAACACTAACGCC
TTGACCACTTGGTCATTGCTCCTTGGGATTTCAAATTCACATTACAATTT
GACAACAGAGATGTTATAAATATCGTTAGTGGAAGGTCTTCCACTTAAGA
AAAGACTTATGGTTTTTTCTTCCAATTAAACCCTCTTCTCACAGACCCGT
TGGAATTTTATCAGCCAGTGATGGCGATTGATATTCTCATGTTTTTTATG
GCTGGGGATTTAAATTCCATTGTTTTCTAGCCAGAAAATTCAGCGACGAT
GGAAAAAATAGCACAATATTTGGCAGTGGAGATTTGCTTATCTGATTATT
CTCAGCGGGGACTAAGTTTAGAGTATAATTTTCCACTGGGGACGATATTT
TGGCCAATTTTTACAGTGAGTCTGTGAAAAGGGGGTGTCCAATGGTTTCC
TATTGGAGATCAGTTACTTTGATATCTTCACTTACGGTTCAAGTTTAAAT
GTTCTGAGACTGTTCTTATTATTGTTCTAAGAATATTCTTAGATTTTTAA
AATTAATAGAAATAAGTCAATAGCACCATAAATTTTGAGGAGGCTCGATT
GTTTTCAATTTTTTCTCAGTCTCATTTTTTTGGGGACTTCTTTGAGATTT
TCAACTTGAAATTGTTCTTACTCTGTTCTTATTTTCTAGGCTTATTAACC
AAAATTTACTATTTTGAGCCTTAAATTGCTTAAAATTCAGCAACAAAAGG
TTCGACTTAATTGTCATTCTTTGCCTTTTTGAGCCTCATTGTTCTTATAA
AAAAGACTCTTTGTCACACATACATAGAGAGACTTGATCTTGTGGTAGGA
TAATTTTCAATTTTTTAGAAAGAAAAAGATAAAAAAACAAGCTTGATTTC
AATGAAATCAAATTTTCTCGAAAAGCTGCGGAAAATGGCCTAGAGAGGCT
TTGAAAATGATATGCGTTAATCGATATACCATAAGGCGAAAAATATTTCC
AAGGAATTGCAAAAAAGATAGTATACATAAAAACTGATGAACCGTGGGAT
ATTTTTTATGAGCATACACCTTTTTATAAGAACAAACTGTTTAAGAAAAT
AAGGCTTTGATGGCCGAGAACAAGTAAAGAACATTTTAAGACTTTGCGAA
CTCTAAAAAGCCCAATACTTAAAGAATATTGCATAAAATGGGAAAAATAA
GAACATGTTAAGAACAATTATAGGCTTAAAACTCAGAAAGATAAGAACAC
CTAGTGGTTTTAAAAATTTTGGATGTTCCTGTAAAACAATATGTTGCTTT
GAAATTGATGAGAATGATGATTAGAAAATGAAAATAAAAATGAAGATGAT
CATGATCATCTTGAGGAAAAGGTGTGAAATTAAAATTGAAAAATTCACCG
AAACGTTTTTTTATAAGCACATCCAAAATTTATAAAGCCATTAGATGTTC
TAAAGATGTTCTTAATATCACCATCTGGTTAGTATTCTTGTGCAATTTTC
TAAAGAAAATTGGATGTTATAAAAGTCCTTAAAGCTCTTAAAGTTTATAA
TGTTCTTAGCTTGTTCTTAAGATTTTGGCCACCGAAGCCTTATGTATGTT
CCTTATAAAGTTTAATCTTATAAGAAAAGGTGTATGGCGCAATCCTTTAT
ACAATAGCAACCAATATTTTAGTTAGTTATTGTTTGAATTTTAAAATTAC
AATCCAACGCCAATCTCTTGTAAAAAGAGACGTTCACATCGTACTCATAT
TATATCGGAAGCATGCAATCTTGCACAAGATTTTCGGGAAGTTTTAACTT
AAAAAAAGCCGAAAACGCGAACAGAAGTAAAATTTAAATGCTCTAATGAA
GGCCTTTATCTCGAATTTCATATACACTTTGATGACTAGAATTGTAAAAA
ACCATCGGGTATCTCAAATTTCAAATCTTTTTAAGAGAAGAAATCTTAGC
TAAAAATTAGTCCATTTCGTGAGATCTACGTGAAATTCACTTCGGCAGTG
AAAAAAGTGTGTTTTCAAATTTTGTCGAAATACCAGAATATTCGGCGAAT
TGGACAAACACATAAAATGAGTAAAATATTTCGTGACAATTTGAAAAGCC
TATTTATCACAAAAGAAACAACAGATCTTAATCAGATAGAACAGACTCCG
AAGGAAGATATTCTCTACCACGACGCGTCGGAAAAAGTTTTCCAAAACAA
AATTTTTTTATCATTTTGCGGGAATCAGTCAAGATGGATTACGGAAAACA
TCAATCATCACCCGAGATATAGAACATCAAGGGTAAACAAAAAAGATTAT
TACTCTCCCTTGTTCCCAGTCCGCAAATTAAATAAAAAGGGCGCTTCCGA
GAAATTGGTGTACTCTGGTATTTAAGGAAAAAATTACCAATGCTCCGAAA
TTTTGTACCCTCGGAAGCCCAAACTAAAAAATGTGTCACAAAAGCACGAA
ATTCTATACACCTTTTCGACCGTAGTCGGTCAGTGCGGTCAGACGCGTGT
CCCTTGATTATTTAATTACCCCCCACCCCCTAAACTCGATCCAATCCTTT
TTTGACTCATTTTTCTATTGGTCTATAGGTGCGAAAGAAGGACTGAGACG
GTTTAAGTGGGATAAAGCGGACAAAAAATGCTTGCGCGGCAATTGGCGGC
TACGGTCGTAAAGGTGTATTTAGAGATTGACGTAATTTATGAAAAGGTCT
ATTGTATTTAGGTTCAATGAAAATTGAATTAGAGTTTGTTATTTTTGTGC
ACAATTTAATCTACATTGCTTGCGGTAACCTCGCGAAATGCATGATCGTT
ATCCTCAATCAAGCATGCTATATTAAATAAATTAGGTAGCCCTTAGCAAC
CAGATTAACCCTTTGTGTGCGCTGTTATTTTAGAAAAAGTCGAAATTTTT
CTAATTTTTTATTTGAAACTCAAAACTTTAAAGTGCCATAAAAGCTTGTA
GCCTTTGATTTAGAAGATGGTTTTGGTACTATTGGAAAGCTATTTTTATA
TTCAAAGAATTTGGTTTAATCCCTTTTGAATCAAGTGGTCAGGAGCTATG
GCCTCAAGTCTGAGACTTAGTATTTTGGCTTGTTTTGGACACATATACGC
GTCCCTCGTGGTCTAAGGGTTAACGACATTGTCCAACTTTTTAGAATCGA
AAAAGGCACCTCCATTTCTTGTAGTCGTAATCATTGTATGACTACTTATA
GCCTTTTTTCCCTGAATATGTAATTCGGCCAATGACGAAATTGTTAAAAG
TCACCGGACTCGTCAAACGTCATTCCAGTCAAAATTGATCCACATGATAA
AAATGTAGAGTAGATTTCTAAGGCTGACGGGCCAATAATTTTGACAGCCT
TTAAGTTTTATACTTTCAAAGTGTTTTCATGATCAGCGACGCAAATTCTT
TTTCTGTAAGCAATCAAAGACCTCCAAAACTTTTTTAGCGCAAAATCTAG
TAGCCCGGTACCTGATTGAGCTATTTTGTCTTGGATACTTAAATCAGGTC
TTGGATAGCTAGATTTTGCGCTTTTGAGCTTTATTTAATATTCCGATATT
CAGATATCAGATAGTAAGGGCTGGGGTTCAGGCCTCCCAATACAAAATAT
TTGACACGGTCTGCCAAACCTTCCAGATGTTAAAAATCTCCCAACCTTCA
GAACTTTAGCATGTCGGAAAAAATTTCTACATCGAGTGCCAGTAATCTAC
ACGTTTTTTTTTTTAAGAAACTTGTTTTACCAAGCAGGCTCAATGTTTCT
TAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAACT
TTGTCAAGCTTAAAGGACGTATGTCGATAATACAATAGTCTAATAGACTA
ATCTACGGTACTTTCCCATCTTCTATATTGATTTTCTGACTTTCTCAAGT
GTTTCTAACTGTTATATAAGTATTTTTCTGGAACTTTGCCTTGATTGGAA
GGTTCTTTAAAAAAAAAGAATTAAAAAATGTTATTTCTCATTCTCAGCCT
CAGCATGTTTCTTAGACGTTTCTTAGTTTTTAGGCATTCTGAGCCTCGTG
TTTCTTAAAAGTGTGTTTCTTAAAAAAAAACGTGTATCAGCTGAACGGAA
AATTAAAAAGGGCGAAGGGTTTGAACCTATAGATTTATAAAGCCCAAATG
GCTAGATGTCGTGCTTTAAGCCATCGCAGGCAAAGAAAAGTTAATATCGG
AAAAAATATTGTTGCTATTGGTTTCAAAAACTCGTGAAACTTCTGATTGG
TCGAGCGTTGCAATTCTATTGTAATATCACGTGACTTACCACGGCACACT
TTTCAGCAAAGTACGCTATCTAGCCTTTCGGGCTTTATAAATCTATGTTT
GAACCGGGAACCCTGGCAGCTGACACCATAAGCCACTCAAACGACGCTCC
TGAGTAAATGAATTTTCGTCAACCTGACATTTTCTTCTTTTGTTTTTGTT
TACAGAATATTTCAACGATAGTGCATCAGAAGAGAATTCAGTCGGTAAAT
CAAAACTCGATGTCATGGTTGAGACGAAAAAAGACGAATATGTTAGCTCA
TTCACTGTCCACGGCCTCACGCGAATCTTCAAAGGTTCAAAGTCAGAATC
TATGTTCTGGATGATGATGCTTTTAGTAGGTGTGACCCTTTCTACGTATG
TGATCCATGGCCTAATCAAGAAATACTTTGAATACAACATATATACCGAG
GTTCGATCCACCGTATCGATAAAGAATATATTCCCAGGAATCACTGTTTG
TGAATTTAACGGGATGTTATCAAATTACTTCGCATATTGTGGTCAACAAA
GAGGACACGCTACCATTTACGAAGCTGACAATGTTTGTAGTGTGGATGCC
AGAGCTGGAAAAGAGGAGATTAAAGATCGTTTAGATCATCCATTTCAATG
GAGTAATAGTGTCTTCAATGTGACACAATGTCATACCTGGGGTGGCAAAT
ATTGTGCTAAGGACACTTATATCAAATCACTGGCCGACCATAACCACAGA
TGTTTCACGTTCAATTATAATGGAGATTTCTATGACACATACTCGCACGC
GTATATGGAATTCACCATAAATGACAAGTATGCAAGAGGTGCTCCATTTA
TTATTGCCATAGTTCATGATCCAAGAATCGCCGAACTGGATATGACAAAC
AGAGTGGTTTTGGAAGCATCTAAGATATACGAGTTGAAGATTGAGAAAAC
AGTCATCAAACGCTTACCATCGCCATTCCCTTCAAATTGCACTATTGGTA
AAATGAATGACTTTTTTTCCCTGGTAAATATACCAGGAGGAATTGTCTTG
AATCCATTACATATTCTCGTATGTTTAAAGAGTGTGGTGATGTCTTAGAT
TATCATCAAAAATACATTCCCAAAGAGTTGAAAGACAAGTATAAGACCAA
CAAAACAATACGAGAGGTCGTCCAATGTATTGAAAAATTCAGTCAAGAAG
AAGTCACAGATATTAAAGAATGTCCGTTCCCGTGTGAAGAAATCGAATAT
ACGACAATGCCGACATTCCATAGTCGTGTGCCTAAAGACCCCATTCCAAC
CTATAGGCTACATATACAATACCATAGAGTAGACTCTTACAAATCAATTG
AAGAAAAACAGTTGGTGACTTGGGATCAAGTGGCTGGCGAAGTTGGTGGA
TTGGTTGGATTGGTGATAGGAGCATCGTTCATATCCATAATCGAGATTGT
GTTTTATGTCTTTCTGTGCTCCTTTCATAAAGTGAAAAGGGCATGTTACA
CGTCTGGATGACAAACCAACACGAGACATATTTCGCTGATGAAACAAATC
ATATAACAACATATAAAACGAAAAACGAAAATGTTCAAGTAACAGAGTAG
CCAGATCGGTCTGCCAGGAACGGAGCGTCTGACTGTGGCTGGAGACGCGT
CCCAAGGAAGATACGTACTTTCGAATCAATTTGACTCGTTTTCAGCAAGA
GGTTTATAAAACAACATTAAAACGTATACAATTTAAGCGAAATCAAGTCC
TACACTTGACGCGTCTTGTGGAACACAACTCTAGGAGCCAGTCAAGTAAT
GTCTCATATACAGGGCCCACGCCACTGGGAGGAGCAGGGGTGCCATTATT
CTTCAATTATCATAATTCAAACTTTCAATAACCCATTGTTAGACAAAATA
AGTCTAAAGATATGACATTTTAAGGCATATTAGGGGAGTGAAATCAAAAT
TTTCTCCTGCCTCATCACCTTCTTAGTCATTATCTTTTTAGACTCTGTAT
TTTCCAGACCATGGCGTGGGCCGTGGTATAAGAGCCTGTAAAAAGTTGGG
ATTGGTTATATTTGAATTGAAAATAATAACCCGCCCCCCATTCATGGTGA
ATATTAAAAGACAATATACAAAAACAACAAAGACTGAATAAGATTTTTTT
TTTTTAAATAGTTTATTTTCTCATGGTATATGACAGAAGTTAGCCTATCT
CTATCCCAACACACGATTTTTTGATCACTCTGTTGGAACGGTGTCGAGGA
AAAAGCCGTGGTCGTCTGGTACAGGCTAGACAGAAGTTTGTTTGCTTCGC
AAAATTACCTTATCCGTGTAGCTTTACGATATTGCTGTTTTTTTAAATTT
ACAACATGGTTCCCTGCGTATATATCTAGATTTTGATGCTTACTGATAGC
GCCAGATAATATTCTCTGGCGTCCATACGTAAATAAAGCCTGGGATACAC
GGGGACGAGGTTGATAGAACCATAGAGGCGAAAAGTTGTAAAATTTCAGC
AAAATTTAATTACATCAATTAAGCTTACGCATATGAGCAGCAATGATAGT
AAACGCCCATCGATGCTAGTCTAACCAGGGACTGGGTTTGAGGTTTAATA
GGGTAGAATAATGGCAGCTGTTAGAGTAGGCATTTCACTGCAATTTCATT
TGACATCAGTCAGCCCTGTTAAACTAGTACCCAATCCTTTTTCATCGTGC
AGCTTCTGGCGCAAGAGATGACAGGTGTACTGTGACAGTATTGTAAAAAA
ATATTTCCAATATATTATATAATTTTATTCAAGAAAAATAAAAGGGTACA
GCTG Coding sequence (CDS) from alignment at sc0000078_pilon:1292932..1301035- >MSTRG.11029.2.p1 ID=MSTRG.11029.2.p1|Name=MSTRG.11029.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2010bp|location=Sequence derived from alignment at sc0000078_pilon:1292932..1301035- (Clytia hemisphaerica_ch_hm2_pilon)
AATATTTCAACGATAGTGCATCAGAAGAGAATTCAGTCGGTAAATCAAAA
CTCGATGTCATGGTTGAGACGAAAAAAGACGAATATGTTAGCTCATTCAC
TGTCCACGGCCTCACGCGAATCTTCAAAGGTTCAAAGTCAGAATCTATGT
TCTGGATGATGATGCTTTTAGTAGGTGTGACCCTTTCTACGTATGTGATC
CATGGCCTAATCAAGAAATACTTTGAATACAACATATATACCGAGGTTCG
ATCCACCGTATCGATAAAGAATATATTCCCAGGAATCACTGTTTGTGAAT
TTAACGGGATGTTATCAAATTACTTCGCATATTGTGGTCAACAAAGAGGA
CACGCTACCATTTACGAAGCTGACAATGTTTGTAGTGTGGATGCCAGAGC
TGGAAAAGAGGAGATTAAAGATCGTTTAGATCATCCATTTCAATGGAGTA
ATAGTGTCTTCAATGTGACACAATGTCATACCTGGGGTGGCAAATATTGT
GCTAAGGACACTTATATCAAATCACTGGCCGACCATAACCACAGATGTTT
CACGTTCAATTATAATGGAGATTTCTATGACACATACTCGCACGCGTATA
TGGAATTCACCATAAATGACAAGTATGCAAGAGGTGCTCCATTTATTATT
GCCATAGTTCATGATCCAAGAATCGCCGAACTGGATATGACAAACAGAGT
GGTTTTGGAAGCATCTAAGATATACGAGTTGAAGATTGAGAAAACAGTCA
TCAAACGCTTACCATCGCCATTCCCTTCAAATTGCACTATTGGTAAAATG
AATGACTTTTTTTCCCTGGTAAATATACCAGGAGGAATTGTCTTGAATCC
ATTACATATTCTCGTATGTTTAAAGAGTGTGGTGATGTCTTAGATGAACA
CAATGGTTGTATCTTCGGAGAGCTGTCCAAAATCAATGATTTCGATCATC
GTCAAACGTACAAACACAGATAAATATTGGTCCAAAGATTTTAAGAAACA
AAAGGAATATTTCAACGATAGTGCATCAGAAGAGAATTCAGTCGGTAAAT
CAAAACTCGATGTCATGGTTGAGACGAAAAAAGACGAATATGTTAGCTCA
TTCACTGTCCACGGCCTCACGCGAATCTTCAAAGGTTCAAAGTCAGAATC
TATGTTCTGGATGATGATGCTTTTAGTAGGTGTGACCCTTTCTACGTATG
TGATCCATGGCCTAATCAAGAAATACTTTGAATACAACATATATACCGAG
GTTCGATCCACCGTATCGATAAAGAATATATTCCCAGGAATCACTGTTTG
TGAATTTAACGGGATGTTATCAAATTACTTCGCATATTGTGGTCAACAAA
GAGGACACGCTACCATTTACGAAGCTGACAATGTTTGTAGTGTGGATGCC
AGAGCTGGAAAAGAGGAGATTAAAGATCGTTTAGATCATCCATTTCAATG
GAGTAATAGTGTCTTCAATGTGACACAATGTCATACCTGGGGTGGCAAAT
ATTGTGCTAAGGACACTTATATCAAATCACTGGCCGACCATAACCACAGA
TGTTTCACGTTCAATTATAATGGAGATTTCTATGACACATACTCGCACGC
GTATATGGAATTCACCATAAATGACAAGTATGCAAGAGGTGCTCCATTTA
TTATTGCCATAGTTCATGATCCAAGAATCGCCGAACTGGATATGACAAAC
AGAGTGGTTTTGGAAGCATCTAAGATATACGAGTTGAAGATTGAGAAAAC
AGTCATCAAACGCTTACCATCGCCATTCCCTTCAAATTGCACTATTGGTA
AAATGAATGACTTTTTTTCCCTGGTAAATATACCAGGAGGAATTGTCTTG
AATCCATTACATATTCTCGTATGTTTAAAGAGTGTGGTGATGTCTTAGAT
GAACACAATGGTTGTATCTTCGGAGAGCTGTCCAAAATCAATGATTTCGA
TCATCGTCAAACGTACAAACACAGATAAATATTGGTCCAAAGATTTTAAG
AAACAAAAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1292932..1301035 - |
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