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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1179365..1184154- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11024.1.p1 ID=MSTRG.11024.1.p1|Name=MSTRG.11024.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4790bp|location=Sequence derived from alignment at sc0000078_pilon:1179365..1184154- (Clytia hemisphaerica_ch_hm2_pilon)
AATGGACCCCTCTTTTGTTCTAAATGATAAAGAAAGCTTTTTAAATAATT
GTTAGACCGATTTGTATAGAGCGAGTAAGAGAGAGAAAAAAAAGCTATAT
AGTTGGAGTTTTTAATTGAGCTCTATTATAAAGAGTTTACTCGAGAAGAA
AAAAAATTAATCAGTCTTTTAGGAAAAAGGCCGTATATAACTGAAGGGAA
TTTTAGAGAGAGTGCATTAGTTGAACAGGACACTTTCATGAGGTAACATC
TCAATTTAAAATATTTTTTTTTTGGAATTTTTTTTCTTAATCTTTTTTAT
ATAGGATATTCTTATAAAAAGATGACCTTAAATTTTTTATAAGATGATGA
TTTTTTTCTCATTCTTTCAATCCCTTGTGCAAACTGTTTTGGGACAAGGG
CTTGATAGAACATCACAGGGGGACCTGAAAGGGGAGGAGATGTCCATGCA
GTGTTTTTGACATTCAGGGAAAAAACAAAAAGATTGAAGATGAAAAAGGT
CACTTAAAAATTAATGATTTTTCTACACTTTTGAAGCTATAATAAGCTAT
TTTCTAACTTTTTACGGTGATAAAAATTTGATGGACCATTCATTTGCATT
TGGGAAAGTGATTTTTAATGATTGACAAAAAAATGGGACAATTTGCTTTT
TTTTCTTAATTTTCAACTTCATTATTCTTAATTTACTTTTCTTTTTGATG
GTACCTGCCAATTTAATTACTCTTGATAATTATTGGTACTGCTAACAAAG
AGAGAAGACAAAAAGCGGAGAATAGGTGGTAGAACAATAGAATTGTAATT
AAGAAGACTCGATCGGAAATCAAATGACCAATTTAAATTTATGATCAATA
GCATCCGTTAAAAATATTTTCCTTTCTTTTCAATACTATTGTTCTACTTT
CATCCGCTTATAAACGACTCTTTATTCTTCTCTAATTAATAAAAGTCGAT
GAAGAGAATTAATTTAGTTACATTTCAAGCATTGTCGTCTAAGCATCAAG
GTCTAAAAAGCAAACATCAATTCAAACAACACATTAATTATAGACTGAAT
ATTTATCTTATCTATTAATGATAAATTTCAGTATTATTTTTAATTGATCG
TGTTCATGTATTGATAGCTATACCTTATACTTAGTACATTCGAAGTGATT
ACTGTATTTGGTTTTATATTGGTGTGGTTGTATAATTGGTTTCAATATTT
TATCAACTCAATAGAACGACAAGAGAAGCTACGAAACGATTTAACATTTG
CACACACACAAATATCGACACAACAACAAAACAACAAGATGTTTGCGGGA
TCAGATCTCTCCAATAACGTTGTTCCTGACCCAACTGCATACGCACAGGT
AAGGATAGAGAATTCTTAGTAATTAGCTATCTATTTTAGAAAATAATAGG
ATATTTTTAATTGACTTGAAAATGTTTTTTCTACAGTAGGGTATCGATTT
TAATATGTTGTTTTGATCAGTGAGACGCATGATCAATGAGACAAAAAACG
TCTTTTTTATTAAATTTTTCTATTCACTTTTAAACTCAATTACTGTTAGC
TGGGAGTCTATCACGGGACGAAAAAATAAGGAAATTAAATCAACGCCTAC
TATAGAAGTTGAAAATGTTTTCAAAAATTCTCCCGTTTGCTTTTTTTATA
ATTTTGGCAGTTTCGGACATATCACGAAAAATAACCTCTCGAAAGTCATG
CTTCAACTTGTAATAACCCAATTCAAAATATGATTACGTAAAGCACTTAT
TATGTTGAAATTGTTTTGTTTATTATATTATTCATGAATCGTTAACAAAA
TAATAAAAATTGAATAGAAAGAATAAAAGAAAATGATAGAGAAAAAAAAA
TTTTCGAAAAGATAATTACTGTATTGAAACTATTATTAATTTTCTCTTTA
GTATTTTTGCGAAATAGTTAATGACGCTTGAAATCAAGAGGTTCTTTAAT
TTTGAAATCAATTATATAGTGCATTAGGAGATCGAAAGACCGAAATTTTG
TGCAAAATAACAAAATTGTTTAAATAATTTTCATTTCTCTTTTGTAGGAA
GCACTATCAATGGGCAGTATGGATGAACAAAGTCTTTTCGATTCTTACGA
AAACCAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGACAGTGACC
CATGGTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGATTTTCATATA
CCACCAAAACGAGCTAATATGTTTGAAAATGAAACTAAACCTGAAATTCA
ACCTGAAGATGACAAGCGTGTTATCGTACCTGCCGACCCCATGTGCTGGA
CCAACGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAAAGAATTCAGC
TTAAAAGATGTTGACGTTAACACCTTTACAATGACGGGACAAGAATTATG
TAAACTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCATACAACGGCG
ATATATTGATGGCGCATTTATGCGTCTTACGCAAAGGTATTGATGTGTTC
ATTTTGTGTTTTTCTCATTTTTAAAATTGCCACTTTTTTTCATTGTCAAG
TGCTTTTTATTTGAATGGGTTTTTTTCAGTTGATTGTTTTTTTAAAGAGA
GTCGTTAGTGGTCTTCAAGTTAATTACAAATCATTATAAGAAAATAGCTT
CAAAGCACAAAATAACATTTTGAATGATAGAGAGCGGTCACATCAAATAA
ATGGTATTAAAAACGGTCGAAAGTCTGATTTAATTGTCTATGTGGCGATG
ACATAAATTTATCTTGTTAAAAAATAAGTGTTGCACAAATAAATAATATT
ATTTTTTTTGTATCATTTCATTTATAGCACCTTTACCAAATCTCACAACT
GAAGATATCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAA
CGGCGCTAAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTG
CGTCGCCACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCC
GATGGTTCGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTC
TTCATCCTCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCC
CTTCAAAATCATTCGAATCACCCCCAACATCTCACAGTGGTAAGGACATT
TTCCTCCATACTATAATTTTGTATAAGGTGGCGTTGATTTTTCCTTGAGG
CTAAATTCTCACGTAGTTCTATTTTTTTTTTGCCTAATACTTCAAGCTTC
AAGTACTCATACTTCTAAAAAACTTCTGACTGTTTCTTAATGTTGACGTC
AGCAAAAAAAATCTTGAAAAATTTGTTATGATAACACAAGTATCTAATTG
CCCGCCTTCTATTTTGTCATTTAAAAAATTTCAACAAAAAAAATGTTTTC
CTTACTGAAGCTTCTTAAGTCCAACTAAGAATGATAACAAGCAAACTTAA
GTGTGGAAATCTACTCTTAAAACTCATAACACATCACATCAAAAATTACA
AAAATTTATAACAGAATTTCTCTTTTTTTTTTCAACAGAGTACAACCCGT
CATGTCCCTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGC
GGAAGCGGACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGA
CCCATCACACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCA
AACTTACCGATCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAAC
AAACCCAACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTA
CGATAAAAACATCATGACCAAAATTCACGGCAAACGATATGCATATAAAT
TCGACTTTCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCC
CAATTACACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCC
ATTCTACTCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTT
ACCCATCGTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGC
AACCAATACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTA
CAGCCGACAATCATCGGCACCGTACTTTTAGAATGGATTGATTGACATGT
TCTATAATCTTTAATAATATATATTTCTATATATTCTTTTGACTGTTCTT
TGTAACGTACGCGTAACTGCCCTTCAACGTGCTCGTAATTTTGTTGTGTT
ACGAAATTACGAGTTTTTTTAGAGAATTTATTTTATTTATATTGGTTTTT
TACCAATGCTTACGTATTTTTCCTCTTAATTTTCCAGCGCAGTTTCTATC
TGTCATTATGCCTTGAGAATTTTGATTTTCAGTATTTGTGACAAAGGACC
TCGAAATTTCGAAAGTTTTTTTTGCGACCAAGTCGAAAACTTTGATATTT
TACGAGATAATCTAAAATTTTACAGTTTGTTTCTGGTTTTGCGGTCCACA
TCAATTATAGCATTTATTATATTATTATATATTGTTATTATTATTGTTTG
ACGCGACTTTTTGTTTCAAGGTAAAAAGTCGATGGACCAAAAAAGCTAAA
AATTCTATTGGTGTATGAAAGGTTTATATTTTTATTCTTTTATCCTAAGT
ATTAAGAAGATGCATGTGTTTTTTGGAGATGTTTAATAAAAAACGAAAGA
TTTATTATTTGTGACTTATAATTGATATTATTACATATAAAAAAACATTT
AAAAAATAAATAAAAGTTGAAAACTTTGTGTAAAATTAAA Coding sequence (CDS) from alignment at sc0000078_pilon:1179365..1184154- >MSTRG.11024.1.p1 ID=MSTRG.11024.1.p1|Name=MSTRG.11024.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5616bp|location=Sequence derived from alignment at sc0000078_pilon:1179365..1184154- (Clytia hemisphaerica_ch_hm2_pilon)
AGTACAACCCGTCATGTCCCTCACCTAAACCAGCATCTCTCCCACCGACG
ACATCACACGGCGGAAGCGGACAAATCCAATTATGGCAATTCTTACTCGA
ACTCTTATCCGACCCATCACACGCGAGTTTCATCGCATGGGAAGGTAACA
ACGGCGAATTCAAACTTACCGATCCCGACGAAGTTGCCCGACGATGGGGT
GAACGTAAAAACAAACCCAACATGAACTACGACAAGTTATCGCGTGCTTT
ACGATATTATTACGATAAAAACATCATGACCAAAATTCACGGCAAACGAT
ATGCATATAAATTCGACTTTCAAGGACTTGCACAATTAAACCAACCAATT
ACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCAGCGGCTGCCTACAG
AGGTGAATACCCATTCTACTCACCCTATGGACCACCACCCGCCCCAGGAT
CACCATACGGTTACCCATCGTCCTCGTACCCACAATGCTATTCGTCAGTA
CAGTCGCCTAGCAACCAATACGGATATCCATGGGGACGCTCATCATACCC
AACAAGTATGTACAGCCGACAATCATCGGCACCGTACTTTTAGCACCTTT
ACCAAATCTCACAACTGAAGATATCGATAAAGCCCTGGCCCCACCATTGA
GTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTTATCCACGCACAGAA
GCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGTTATTCCCGATCCGT
GCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAACGAGCTGTGCTTACA
ACCAATCATCTTCGTCTTCATCCTCATCGACTCCATCTTCATCGACAAAC
CGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCACCCCCAACATCTCA
CAGTGGAAGCACTATCAATGGGCAGTATGGATGAACAAAGTCTTTTCGAT
TCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGA
CAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGATT
TTCATATACCACCAAAACGAGCTAATATGTTTGAAAATGAAACTAAACCT
GAAATTCAACCTGAAGATGACAAGCGTGTTATCGTACCTGCCGACCCCAT
GTGCTGGACCAACGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAAAG
AATTCAGCTTAAAAGATGTTGACGTTAACACCTTTACAATGACGGGACAA
GAATTATGTAAACTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCATA
CAACGGCGATATATTGATGGCGCATTTATGCGTCTTACGCAAAGATGTTT
GCGGGATCAGATCTCTCCAATAACGTTGTTCCTGACCCAACTGCATACGC
ACAGAGTACAACCCGTCATGTCCCTCACCTAAACCAGCATCTCTCCCACC
GACGACATCACACGGCGGAAGCGGACAAATCCAATTATGGCAATTCTTAC
TCGAACTCTTATCCGACCCATCACACGCGAGTTTCATCGCATGGGAAGGT
AACAACGGCGAATTCAAACTTACCGATCCCGACGAAGTTGCCCGACGATG
GGGTGAACGTAAAAACAAACCCAACATGAACTACGACAAGTTATCGCGTG
CTTTACGATATTATTACGATAAAAACATCATGACCAAAATTCACGGCAAA
CGATATGCATATAAATTCGACTTTCAAGGACTTGCACAATTAAACCAACC
AATTACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCAGCGGCTGCCT
ACAGAGGTGAATACCCATTCTACTCACCCTATGGACCACCACCCGCCCCA
GGATCACCATACGGTTACCCATCGTCCTCGTACCCACAATGCTATTCGTC
AGTACAGTCGCCTAGCAACCAATACGGATATCCATGGGGACGCTCATCAT
ACCCAACAAGTATGTACAGCCGACAATCATCGGCACCGTACTTTTAGCAC
CTTTACCAAATCTCACAACTGAAGATATCGATAAAGCCCTGGCCCCACCA
TTGAGTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTTATCCACGCAC
AGAAGCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGTTATTCCCGAT
CCGTGCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAACGAGCTGTGCT
TACAACCAATCATCTTCGTCTTCATCCTCATCGACTCCATCTTCATCGAC
AAACCGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCACCCCCAACAT
CTCACAGTGGAAGCACTATCAATGGGCAGTATGGATGAACAAAGTCTTTT
CGATTCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAA
CAGACAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAGCGATTTTGAT
GATTTTCATATACCACCAAAACGAGCTAATATGTTTGAAAATGAAACTAA
ACCTGAAATTCAACCTGAAGATGACAAGCGTGTTATCGTACCTGCCGACC
CCATGTGCTGGACCAACGAGCACGTCCGACAATGGGTCCAGTGGGCCATT
AAAGAATTCAGCTTAAAAGATGTTGACGTTAACACCTTTACAATGACGGG
ACAAGAATTATGTAAACTAACACGTGAAGAATTCTTACGTCTAGCTCCCG
CATACAACGGCGATATATTGATGGCGCATTTATGCGTCTTACGCAAAGAT
GTTTGCGGGATCAGATCTCTCCAATAACGTTGTTCCTGACCCAACTGCAT
ACGCACAGAGTACAACCCGTCATGTCCCTCACCTAAACCAGCATCTCTCC
CACCGACGACATCACACGGCGGAAGCGGACAAATCCAATTATGGCAATTC
TTACTCGAACTCTTATCCGACCCATCACACGCGAGTTTCATCGCATGGGA
AGGTAACAACGGCGAATTCAAACTTACCGATCCCGACGAAGTTGCCCGAC
GATGGGGTGAACGTAAAAACAAACCCAACATGAACTACGACAAGTTATCG
CGTGCTTTACGATATTATTACGATAAAAACATCATGACCAAAATTCACGG
CAAACGATATGCATATAAATTCGACTTTCAAGGACTTGCACAATTAAACC
AACCAATTACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCAGCGGCT
GCCTACAGAGGTGAATACCCATTCTACTCACCCTATGGACCACCACCCGC
CCCAGGATCACCATACGGTTACCCATCGTCCTCGTACCCACAATGCTATT
CGTCAGTACAGTCGCCTAGCAACCAATACGGATATCCATGGGGACGCTCA
TCATACCCAACAAGTATGTACAGCCGACAATCATCGGCACCGTACTTTTA
GCACCTTTACCAAATCTCACAACTGAAGATATCGATAAAGCCCTGGCCCC
ACCATTGAGTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTTATCCAC
GCACAGAAGCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGTTATTCC
CGATCCGTGCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAACGAGCTG
TGCTTACAACCAATCATCTTCGTCTTCATCCTCATCGACTCCATCTTCAT
CGACAAACCGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCACCCCCA
ACATCTCACAGTGGAAGCACTATCAATGGGCAGTATGGATGAACAAAGTC
TTTTCGATTCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCACCAAAG
CTAACAGACAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAGCGATTT
TGATGATTTTCATATACCACCAAAACGAGCTAATATGTTTGAAAATGAAA
CTAAACCTGAAATTCAACCTGAAGATGACAAGCGTGTTATCGTACCTGCC
GACCCCATGTGCTGGACCAACGAGCACGTCCGACAATGGGTCCAGTGGGC
CATTAAAGAATTCAGCTTAAAAGATGTTGACGTTAACACCTTTACAATGA
CGGGACAAGAATTATGTAAACTAACACGTGAAGAATTCTTACGTCTAGCT
CCCGCATACAACGGCGATATATTGATGGCGCATTTATGCGTCTTACGCAA
AGATGTTTGCGGGATCAGATCTCTCCAATAACGTTGTTCCTGACCCAACT
GCATACGCACAGAGTACAACCCGTCATGTCCCTCACCTAAACCAGCATCT
CTCCCACCGACGACATCACACGGCGGAAGCGGACAAATCCAATTATGGCA
ATTCTTACTCGAACTCTTATCCGACCCATCACACGCGAGTTTCATCGCAT
GGGAAGGTAACAACGGCGAATTCAAACTTACCGATCCCGACGAAGTTGCC
CGACGATGGGGTGAACGTAAAAACAAACCCAACATGAACTACGACAAGTT
ATCGCGTGCTTTACGATATTATTACGATAAAAACATCATGACCAAAATTC
ACGGCAAACGATATGCATATAAATTCGACTTTCAAGGACTTGCACAATTA
AACCAACCAATTACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCAGC
GGCTGCCTACAGAGGTGAATACCCATTCTACTCACCCTATGGACCACCAC
CCGCCCCAGGATCACCATACGGTTACCCATCGTCCTCGTACCCACAATGC
TATTCGTCAGTACAGTCGCCTAGCAACCAATACGGATATCCATGGGGACG
CTCATCATACCCAACAAGTATGTACAGCCGACAATCATCGGCACCGTACT
TTTAGCACCTTTACCAAATCTCACAACTGAAGATATCGATAAAGCCCTGG
CCCCACCATTGAGTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTTAT
CCACGCACAGAAGCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGTTA
TTCCCGATCCGTGCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAACGA
GCTGTGCTTACAACCAATCATCTTCGTCTTCATCCTCATCGACTCCATCT
TCATCGACAAACCGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCACC
CCCAACATCTCACAGTGGAAGCACTATCAATGGGCAGTATGGATGAACAA
AGTCTTTTCGATTCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCACC
AAAGCTAACAGACAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAGCG
ATTTTGATGATTTTCATATACCACCAAAACGAGCTAATATGTTTGAAAAT
GAAACTAAACCTGAAATTCAACCTGAAGATGACAAGCGTGTTATCGTACC
TGCCGACCCCATGTGCTGGACCAACGAGCACGTCCGACAATGGGTCCAGT
GGGCCATTAAAGAATTCAGCTTAAAAGATGTTGACGTTAACACCTTTACA
ATGACGGGACAAGAATTATGTAAACTAACACGTGAAGAATTCTTACGTCT
AGCTCCCGCATACAACGGCGATATATTGATGGCGCATTTATGCGTCTTAC
GCAAAGATGTTTGCGGGATCAGATCTCTCCAATAACGTTGTTCCTGACCC
AACTGCATACGCACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1179365..1184154 - |
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