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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1130475..1135193+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11022.4.p1 ID=MSTRG.11022.4.p1|Name=MSTRG.11022.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4719bp|location=Sequence derived from alignment at sc0000078_pilon:1130475..1135193+ (Clytia hemisphaerica_ch_hm2_pilon)
aaataaacaaaatgtaACTGAGGCTgaagaaatgaatgaatgataCAGGT
AGAAAACTAGATTTGTCCATTGTTTTTTGCTTTTGTTGCGCAAGGTCAAC
AGACCCAAAGCCTTTTCAAATTCAGGAGCAACTAAAATCACTCCCTAGTC
AAGGTACCCTTAAATAAactaagtttttttcaaaacctgaaTAAAGGAGA
ACAAAGCTGGCAAAAAAGGTTAGGTGCTTAGCCTGTATAAAGATAAAAGA
ATAAAGTGAATTTTTAAATGCCATTTTGTCACTTCGAATTTTCGAATATT
ATTTAATTTCAACTAAGGAAAGGTtgttattctcatttttttaaacagGA
TAGCACTGGACTTGGCAGCCCTAGGTCCTAACTTACCAGTACAGAACTGT
AACAAAATCTCGCGTGGTACCACTTTAGACTCTATTTCTTTTAACCAGGA
AAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaaccagaaaagc
aaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATA
CATTAGGTATGGGgctgtccacatagtacgtacgcactaaagggggaggg
gggtcttctcaaaagtgTATGAAAAGCGagttaaagaaaaatgtatgtac
gcattgtaaagaaaaatttttgtttttttgtcgacttttacacTTCTTAT
CTgttcttatacgcatcaaggaatagaaaaagtttcttaataaacaacaa
gtttcatgtatgaaatgaAGATCcaaaccaaacgatttgaatttaaaatg
ttcttcaaccgaGgggggcggggggggggggggggagttatGAAAAAGTA
CGTTTTTTACcaggggtatagccatttgcgtacaaGGGGTACCCCctgta
ctcgattttcgacattttagtgcgtacatACAATGTGGAAGGCCCCTATG
CAATATTTAATAAGATCCTTATCCAAAGAATCTGACTGTAACTATTTTCT
GTTGTATGGCTGGCAACGGATCAAGTTAACACCTGCCAAGTAAAATTCAA
AACTGCGTAAGGCCTACCCTCTGcgtttgtctgttaccagcttttttttg
gtattggttctttgttagtttttttgcacaaagatatgGAAAAATTGGTA
ATAACTGAgctccattttcaaaaaaaagttttttgcttgccaaaaaatgt
caaaatatgcGGAAGTTcgttattttagattttcaaagatttttttttta
atcaattctACCATCCTAGAAATTGGAGGGAGCAGCCAATTGTCGCCACT
ATAATGATTTTTCTTGATATTCTCTGTACTCATTGAATTTACCGATTTTT
TCTTCCTTAATCTTCATTTAGCATGgtttaattttcataaaaaaattatt
ttcaatcactTGATGTACAGCCAGTAAAATTTATTTGAGCCTTCTTTCTC
CTTTTTCTCTTCGTCTTTTTGACATCAGGTcttcatcaggtaggtccaat
caaCATCCAtccattattattattttcagaagaaaagtcaccagtgaaaa
aaggcaagaaaggaagaaaaacaaaagagaaatcACTTGAGTTTGTTGAA
GATGACAAACCAGACGAACATACAGGTATAAGCATGACATATTGTGCACT
GAAAAAGCAGCAATTATAATAGCATGCCATATTTCGGAAAGGATTAAATT
AGGACTgtcattttttcttctgttattttattCTGTTGTCAactcagcgt
tttgattggtcgagagcatcgagatatttgtgATATTTAATATTTCACAT
GTGCAAGATATGACTACGTTGACTTTCGGGGGCTGTGTGAGCGgtgggag
aaaaatcaaaacaaaacagccgaaaagaactgactaaagaaaaaataaag
atcagcaaaaagaTTATTTGCAGATTAATTTTTTACTTTGGATTTCTTCC
ATTAGAGACactaaaatggggggggggtttgtaggggttcgaaataccgt
tttcccgtcaaaatttttgctgaatcccggaatcccgaaaattgaaaaaa
taataacaccgtcacaccagCTTGTACAGGgaaaaaatgtacctaaatac
cgtcagcttctgattttaaaataccgttttcccgtctcttttttcgtcaa
atcccgtataataccgtactaaaaaagggccaatcccgtcacaccgtaaa
agtacaaacccccctctaaaatcaaatctaatgaaatgtatcagtaaaaa
attaaataaaagtagaatttcatctaaaaaatctcctaaaaagacagcaa
aaatttagatttttgaaatttcagggtcggtcgggcccataaaacaaact
aattaaattggtcttgccTAATAATACTTTCATTTAATATTATTTAAGAG
CCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaa
cagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGGTA
AAGCACTGTTCTTTGTAATACTTCTTTATAATGGCTTTGTTGTCAGTCAA
CATAGATTCGACATGGAAGTGTGAGGGTATGCAGTCTAATATCAAAGAAA
CGAAAATGGAACATAATCTACATACAAAAGATTTTCTACTAAACTATAGG
TTATCTGTTACGCTCCTCTTGACATACCAAAAATTATGTTCACAATTTAA
ATCTTTTTAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaa
gaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTG
AGGATGATGCCAATGACAAAGAAataggttttgtttttttatatttataa
aaggGTTTAGGTTTAGTTTCAATATCGGAATCAGAAGACGACCTATGATG
GTCTCATCTTCTTAAATTCCTCCTTAAGATAGAGGGGACTTGAACGATGT
TGATTAGAATTACCCTATAAGAATAGATGTCAAAGATGGGTTAAAGGGaa
attaaagtagtaaaatgtaaacattgcgcgaaccacgtgtcattaaagag
aacaattgaaatcacgtgtccaaaacaaacttgtaaaacaattgaacaat
caaaataattagccatatttggtttgattttgtatccgctgcatacagtt
tgtttacaaatttcgcaagtactgttatgtccctttaatatgGTGAAGGT
TTTGCCAGTGATATGGTGTCTTTTTCAATCTCCGATTGGGTCATTAAATC
ATCaagtttcgatatttttataagaaaggttATTCACTCGCAAGGGGACG
GGTGTAGTTTAAAATTTATTGTACAAAAAAGTTAATCCTACCATGGTCTT
TTTTGATTCGATCGATATTGATCAAAACGAACCAGGGagaaagagtaaaa
aaaactttcaaaaaacctAAAGAAACATCGCCTGGAATTTATGAAGCTGA
ACAATCAAATGGTATtgaatttgattgattgatatgaATATTAATTTTTA
GCTTCAGTTGAACTATATAAGGGAACAAAATTATGCGGAATGAAAATTTG
GTGGAAATAccaccaaaattaaattcccgccaaatttaaaatattttttt
cccgaATGAGTATTATTtcagtctttaaaaaaaacgttctttctcattta
aaaaaaaagcgccaaaaatatccttcatCTGCCAAAGGAAATTCCCAACG
AAAATAATGTTTTCGGCCATccaacaaattaaattcctgctcAAATTTCT
TCCTTGAGTTAGAATCTAAAAGTGACAGTTTCTAATGACTAATATGGTTT
GCCATTACATTATTCTTTAACTCTTTCAGAGGATGAACCAATAGAAACTA
AAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCC
GAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACA
AGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtgg
tccaagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAG
AAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGT
ACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAG
ATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAa
cctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGA
TGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTAC
AAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGC
ATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAG
ACTCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggt
cgaaaaagtctaaacaaattggtaaaaggaaaaagATTATATGATgtagt
tttttttgtaaatgtttttatagttttataacattgattattttatttta
ctaactttatacatttataACCTAAATGTGCAATTGATTTTATAAGAGGC
TAAATATATCACAAAAGTTTGCTCCGGGATCgtgtcaaaattaaaaagta
tttaaagtaagatctgagaaaattttttccctaTTGTATTATGGGAGAAT
TGGAAAAGTTTGTACATCT Coding sequence (CDS) from alignment at sc0000078_pilon:1130475..1135193+ >MSTRG.11022.4.p1 ID=MSTRG.11022.4.p1|Name=MSTRG.11022.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6570bp|location=Sequence derived from alignment at sc0000078_pilon:1130475..1135193+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatgataCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcag
gaaaaccagaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATG
ATATTCAAGAAGATACATTAGaaaagtcaccagtgaaaaaaggcaagaaa
ggaagaaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACC
AGACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGA
GCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGT
GAAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaa
gaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCA
CTGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACT
AAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCC
CGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAAC
AAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtg
gtccaagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAA
GAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAG
TACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATA
GATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACA
acctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTG
ATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTA
CAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGG
CATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAA
GACTCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttggg
tcgaaaaagtctaaacaaattggtaaaaggaaaaagATTATATGAatgaa
tgataCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaa
ccagaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATT
CAAGAAGATACATTAGaaaagtcaccagtgaaaaaaggcaagaaaggaag
aaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACCAGACG
AACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGG
AACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGA
CATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaaga
aaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTGAG
GATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACTAAAGT
TGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCCGAGG
GGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACAAGAC
ATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtggtcca
agatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAGAAAA
GCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGTACAG
CAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAGATGA
ACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAaccta
aaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGATGAA
CAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGC
ACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGCATTG
GTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTC
AAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggtcgaa
aaagtctaaacaaattggtaaaaggaaaaagATTATATGAatgaatgata
CAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaaccaga
aaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAAGA
AGATACATTAGaaaagtcaccagtgaaaaaaggcaagaaaggaagaaaaa
caaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACCAGACGAACAT
ACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAA
taaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAG
CAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaagaaaagg
aaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTGAGGATGA
TGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACTAAAGTTGAAT
TGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCCGAGGGGATT
TCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACAAGACATCTC
TGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtggtccaagatc
gccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCAT
CAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGA
GGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAGATGAACTGT
TAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAacctaaaaat
cagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGATGAACAATT
TCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGCACCAA
TAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGCATTGGTACT
GATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACG
AGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggtcgaaaaagt
ctaaacaaattggtaaaaggaaaaagATTATATGAatgaatgataCAGGA
AAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaaccagaaaagc
aaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATA
CATTAGaaaagtcaccagtgaaaaaaggcaagaaaggaagaaaaacaaaa
gagaaatcACTTGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGA
GCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaa
acagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGAA
GAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatc
ACCTAGACAGGACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCA
ATGACAAAGAAatagAGGATGAACCAATAGAAACTAAAGTTGAATTGAAT
AATTCACCACCAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTT
AAAAGACAGTCGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtg
ctaaaaaattgaaaaaatcacatcaaaaacaagtggtccaagatcgccaa
aagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTT
ACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTG
AAGAGGAGCAAAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAAC
CAAATAGGTCAAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaa
aattactTTTGAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTG
ATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACA
GCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGCATTGGTACTGATGC
AAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAA
AGAGATTaaaatccaatttcaaacaaaaagttgggtcgaaaaagtctaaa
caaattggtaaaaggaaaaagATTATATGAatgaatgataCAGGAAAGAA
TATCAATGAATCACCAGTgaaaaagagcaggaaaaccagaaaagcaaaag
aaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATTA
Gaaaagtcaccagtgaaaaaaggcaagaaaggaagaaaaacaaaagagaa
atcACTTGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGAGCCAC
AAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaacagt
aaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGAAGAAGA
GCTACAAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatcACCTA
GACAGGACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCAATGAC
AAAGAAatagAGGATGAACCAATAGAAACTAAAGTTGAATTGAATAATTC
ACCACCAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAAG
ACAGTCGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtgctaaa
aaattgaaaaaatcacatcaaaaacaagtggtccaagatcgccaaaagaa
aaatcGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCGG
ATAAGATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGAG
GAGCAAAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAACCAAAT
AGGTCAAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaaaatta
ctTTTGAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTGATGAA
GAGAGTGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACA
GCATTTGTATTCCGTAGATAAGGTCAAAGGCATTGGTACTGATGCAAGAG
AGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGA
TTaaaatccaatttcaaacaaaaagttgggtcgaaaaagtctaaacaaat
tggtaaaaggaaaaagATTATATGAatgaatgataCAGGAAAGAATATCA
ATGAATCACCAGTgaaaaagagcaggaaaaccagaaaagcaaaagaaaaa
tcacCGGAGTTTGTTCAAGATGATGATATTCAAGAAGATACATTAGaaaa
gtcaccagtgaaaaaaggcaagaaaggaagaaaaacaaaagagaaatcAC
TTGAGTTTGTTGAAGATGACAAACCAGACGAACATACAGAGCCACAAATT
ACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaaacagtaaaga
aaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGAAGAAGAGCTAC
AAATAAAGGAATCCCctgtgaagaagaagaaaaggaaatcACCTAGACAG
GACAAAGAACAAATATCAGAGATCACTGAGGATGATGCCAATGACAAAGA
AatagAGGATGAACCAATAGAAACTAAAGTTGAATTGAATAATTCACCAC
CAACAGACTCTGAAGATGAAGCTCCCGAGGGGATTTCTTTAAAAGACAGT
CGTAAGAAAGCTATACAAATTCAACAAGACATCTCTGAtgctaaaaaatt
gaaaaaatcacatcaaaaacaagtggtccaagatcgccaaaagaaaaatc
GTCAACAGCAAGAAAAGTCTAAGAAGAAAAGCCATCAGTTACCGGATAAG
ATTTCAGAGGATGTTTTGAAATTAGTACAGCAAGAGGCTGAAGAGGAGCA
AAATTCAGATTCTGAAATGGATATAGATGAACTGTTAAACCAAATAGGTC
AAGAGAAACCTGCATTTAAAACACAacctaaaaatcagaaaattactTTT
GAAGATGACGATGATCCTGGTTTTGATGAACAATTTCTTGATGAAGAGAG
TGAGGATGACTTAGAATCAGGTTTACAAGCACCAATAACAGCACAGCATT
TGTATTCCGTAGATAAGGTCAAAGGCATTGGTACTGATGCAAGAGAGTTT
CTACAGCAACACTTTTTCGGTAAAAGACTCAAACGAGAAAAGAGATTaaa
atccaatttcaaacaaaaagttgggtcgaaaaagtctaaacaaattggta
aaaggaaaaagATTATATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1130475..1135193 + |
|
