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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:1130474..1135193+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11022.3.p1 ID=MSTRG.11022.3.p1|Name=MSTRG.11022.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4720bp|location=Sequence derived from alignment at sc0000078_pilon:1130474..1135193+ (Clytia hemisphaerica_ch_hm2_pilon)
taaataaacaaaatgtaACTGAGGCTgaagaaatgaatgaatgataCAGG
TAGAAAACTAGATTTGTCCATTGTTTTTTGCTTTTGTTGCGCAAGGTCAA
CAGACCCAAAGCCTTTTCAAATTCAGGAGCAACTAAAATCACTCCCTAGT
CAAGGTACCCTTAAATAAactaagtttttttcaaaacctgaaTAAAGGAG
AACAAAGCTGGCAAAAAAGGTTAGGTGCTTAGCCTGTATAAAGATAAAAG
AATAAAGTGAATTTTTAAATGCCATTTTGTCACTTCGAATTTTCGAATAT
TATTTAATTTCAACTAAGGAAAGGTtgttattctcatttttttaaacagG
ATAGCACTGGACTTGGCAGCCCTAGGTCCTAACTTACCAGTACAGAACTG
TAACAAAATCTCGCGTGGTACCACTTTAGACTCTATTTCTTTTAACCAGG
AAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaaccagaaaag
caaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAAGAAGAT
ACATTAGGTATGGGgctgtccacatagtacgtacgcactaaagggggagg
ggggtcttctcaaaagtgTATGAAAAGCGagttaaagaaaaatgtatgta
cgcattgtaaagaaaaatttttgtttttttgtcgacttttacacTTCTTA
TCTgttcttatacgcatcaaggaatagaaaaagtttcttaataaacaaca
agtttcatgtatgaaatgaAGATCcaaaccaaacgatttgaatttaaaat
gttcttcaaccgaGgggggcggggggggggggggggagttatGAAAAAGT
ACGTTTTTTACcaggggtatagccatttgcgtacaaGGGGTACCCCctgt
actcgattttcgacattttagtgcgtacatACAATGTGGAAGGCCCCTAT
GCAATATTTAATAAGATCCTTATCCAAAGAATCTGACTGTAACTATTTTC
TGTTGTATGGCTGGCAACGGATCAAGTTAACACCTGCCAAGTAAAATTCA
AAACTGCGTAAGGCCTACCCTCTGcgtttgtctgttaccagctttttttt
ggtattggttctttgttagtttttttgcacaaagatatgGAAAAATTGGT
AATAACTGAgctccattttcaaaaaaaagttttttgcttgccaaaaaatg
tcaaaatatgcGGAAGTTcgttattttagattttcaaagatttttttttt
aatcaattctACCATCCTAGAAATTGGAGGGAGCAGCCAATTGTCGCCAC
TATAATGATTTTTCTTGATATTCTCTGTACTCATTGAATTTACCGATTTT
TTCTTCCTTAATCTTCATTTAGCATGgtttaattttcataaaaaaattat
tttcaatcactTGATGTACAGCCAGTAAAATTTATTTGAGCCTTCTTTCT
CCTTTTTCTCTTCGTCTTTTTGACATCAGGTcttcatcaggtaggtccaa
tcaaCATCCAtccattattattattttcagaagaaaagtcaccagtgaaa
aaaggcaagaaaggaagaaaaacaaaagagaaatcACTTGAGTTTGTTGA
AGATGACAAACCAGACGAACATACAGGTATAAGCATGACATATTGTGCAC
TGAAAAAGCAGCAATTATAATAGCATGCCATATTTCGGAAAGGATTAAAT
TAGGACTgtcattttttcttctgttattttattCTGTTGTCAactcagcg
ttttgattggtcgagagcatcgagatatttgtgATATTTAATATTTCACA
TGTGCAAGATATGACTACGTTGACTTTCGGGGGCTGTGTGAGCGgtggga
gaaaaatcaaaacaaaacagccgaaaagaactgactaaagaaaaaataaa
gatcagcaaaaagaTTATTTGCAGATTAATTTTTTACTTTGGATTTCTTC
CATTAGAGACactaaaatggggggggggtttgtaggggttcgaaataccg
ttttcccgtcaaaatttttgctgaatcccggaatcccgaaaattgaaaaa
ataataacaccgtcacaccagCTTGTACAGGgaaaaaatgtacctaaata
ccgtcagcttctgattttaaaataccgttttcccgtctcttttttcgtca
aatcccgtataataccgtactaaaaaagggccaatcccgtcacaccgtaa
aagtacaaacccccctctaaaatcaaatctaatgaaatgtatcagtaaaa
aattaaataaaagtagaatttcatctaaaaaatctcctaaaaagacagca
aaaatttagatttttgaaatttcagggtcggtcgggcccataaaacaaac
taattaaattggtcttgccTAATAATACTTTCATTTAATATTATTTAAGA
GCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAACAAtaaaa
acagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACATAGCAGGT
AAAGCACTGTTCTTTGTAATACTTCTTTATAATGGCTTTGTTGTCAGTCA
ACATAGATTCGACATGGAAGTGTGAGGGTATGCAGTCTAATATCAAAGAA
ACGAAAATGGAACATAATCTACATACAAAAGATTTTCTACTAAACTATAG
GTTATCTGTTACGCTCCTCTTGACATACCAAAAATTATGTTCACAATTTA
AATCTTTTTAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaaga
agaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACT
GAGGATGATGCCAATGACAAAGAAataggttttgtttttttatatttata
aaaggGTTTAGGTTTAGTTTCAATATCGGAATCAGAAGACGACCTATGAT
GGTCTCATCTTCTTAAATTCCTCCTTAAGATAGAGGGGACTTGAACGATG
TTGATTAGAATTACCCTATAAGAATAGATGTCAAAGATGGGTTAAAGGGa
aattaaagtagtaaaatgtaaacattgcgcgaaccacgtgtcattaaaga
gaacaattgaaatcacgtgtccaaaacaaacttgtaaaacaattgaacaa
tcaaaataattagccatatttggtttgattttgtatccgctgcatacagt
ttgtttacaaatttcgcaagtactgttatgtccctttaatatgGTGAAGG
TTTTGCCAGTGATATGGTGTCTTTTTCAATCTCCGATTGGGTCATTAAAT
CATCaagtttcgatatttttataagaaaggttATTCACTCGCAAGGGGAC
GGGTGTAGTTTAAAATTTATTGTACAAAAAAGTTAATCCTACCATGGTCT
TTTTTGATTCGATCGATATTGATCAAAACGAACCAGGGagaaagagtaaa
aaaaactttcaaaaaacctAAAGAAACATCGCCTGGAATTTATGAAGCTG
AACAATCAAATGGTATtgaatttgattgattgatatgaATATTAATTTTT
AGCTTCAGTTGAACTATATAAGGGAACAAAATTATGCGGAATGAAAATTT
GGTGGAAATAccaccaaaattaaattcccgccaaatttaaaatatttttt
tcccgaATGAGTATTATTtcagtctttaaaaaaaacgttctttctcattt
aaaaaaaaagcgccaaaaatatccttcatCTGCCAAAGGAAATTCCCAAC
GAAAATAATGTTTTCGGCCATccaacaaattaaattcctgctcAAATTTC
TTCCTTGAGTTAGAATCTAAAAGTGACAGTTTCTAATGACTAATATGGTT
TGCCATTACATTATTCTTTAACTCTTTCAGAGGATGAACCAATAGAAACT
AAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCC
CGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAAC
AAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtg
gtccaagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAA
GAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAG
TACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATA
GATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACA
acctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTG
ATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTA
CAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGG
CATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAA
GACTCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttggg
tcgaaaaagtctaaacaaattggtaaaaggaaaaagATTATATGATgtag
ttttttttgtaaatgtttttatagttttataacattgattattttatttt
actaactttatacatttataACCTAAATGTGCAATTGATTTTATAAGAGG
CTAAATATATCACAAAAGTTTGCTCCGGGATCgtgtcaaaattaaaaagt
atttaaagtaagatctgagaaaattttttccctaTTGTATTATGGGAGAA
TTGGAAAAGTTTGTACATCT Coding sequence (CDS) from alignment at sc0000078_pilon:1130474..1135193+ >MSTRG.11022.3.p1 ID=MSTRG.11022.3.p1|Name=MSTRG.11022.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6588bp|location=Sequence derived from alignment at sc0000078_pilon:1130474..1135193+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatgataCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcag
gaaaaccagaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATG
ATATTCAAGAAGATACATTAGaagaaaagtcaccagtgaaaaaaggcaag
aaaggaagaaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAA
ACCAGACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAA
AGAGCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACA
AGTGAAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaa
gaagaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGA
TCACTGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAA
ACTAAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGC
TCCCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTC
AACAAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaa
gtggtccaagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAA
GAAGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAAT
TAGTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGAT
ATAGATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAAC
ACAacctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTT
TTGATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGT
TTACAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAA
AGGCATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTA
AAAGACTCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagtt
gggtcgaaaaagtctaaacaaattggtaaaaggaaaaagATTATATGAat
gaatgataCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcagga
aaaccagaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGAT
ATTCAAGAAGATACATTAGaagaaaagtcaccagtgaaaaaaggcaagaa
aggaagaaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAAC
CAGACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAG
AGCCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAG
TGAAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaaga
agaagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATC
ACTGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAAC
TAAAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTC
CCGAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAA
CAAGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagt
ggtccaagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGA
AGAAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTA
GTACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATAT
AGATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACAC
AacctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTT
GATGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTT
ACAAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAG
GCATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAA
AGACTCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgg
gtcgaaaaagtctaaacaaattggtaaaaggaaaaagATTATATGAatga
atgataCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaa
accagaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATAT
TCAAGAAGATACATTAGaagaaaagtcaccagtgaaaaaaggcaagaaag
gaagaaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACCA
GACGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAG
CCGGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTG
AAGACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaag
aagaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCAC
TGAGGATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACTA
AAGTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCC
GAGGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACA
AGACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtgg
tccaagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAG
AAAAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGT
ACAGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAG
ATGAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAa
cctaaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGA
TGAACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTAC
AAGCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGC
ATTGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAG
ACTCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggt
cgaaaaagtctaaacaaattggtaaaaggaaaaagATTATATGAatgaat
gataCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaac
cagaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTC
AAGAAGATACATTAGaagaaaagtcaccagtgaaaaaaggcaagaaagga
agaaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACCAGA
CGAACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCC
GGAACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTGAA
GACATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaa
gaaaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTG
AGGATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACTAAA
GTTGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCCGA
GGGGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACAAG
ACATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtggtc
caagatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAGAA
AAGCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGTAC
AGCAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAGAT
GAACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAacc
taaaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGATG
AACAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTACAA
GCACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGCAT
TGGTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGAC
TCAAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggtcg
aaaaagtctaaacaaattggtaaaaggaaaaagATTATATGAatgaatga
taCAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaacca
gaaaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAA
GAAGATACATTAGaagaaaagtcaccagtgaaaaaaggcaagaaaggaag
aaaaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACCAGACG
AACATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGG
AACAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGA
CATAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaaga
aaaggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTGAG
GATGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACTAAAGT
TGAATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCCGAGG
GGATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACAAGAC
ATCTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtggtcca
agatcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAGAAAA
GCCATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGTACAG
CAAGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAGATGA
ACTGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAaccta
aaaatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGATGAA
CAATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGC
ACCAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGCATTG
GTACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTC
AAACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggtcgaa
aaagtctaaacaaattggtaaaaggaaaaagATTATATGAatgaatgata
CAGGAAAGAATATCAATGAATCACCAGTgaaaaagagcaggaaaaccaga
aaagcaaaagaaaaatcacCGGAGTTTGTTCAAGATGATGATATTCAAGA
AGATACATTAGaagaaaagtcaccagtgaaaaaaggcaagaaaggaagaa
aaacaaaagagaaatcACTTGAGTTTGTTGAAGATGACAAACCAGACGAA
CATACAGAGCCACAAATTACAGAAGAATCGTCAGTGAAAAAGAGCCGGAA
CAAtaaaaacagtaaagaaaaaaaatcagatgCTGTAACAAGTGAAGACA
TAGCAGAAGAAGAGCTACAAATAAAGGAATCCCctgtgaagaagaagaaa
aggaaatcACCTAGACAGGACAAAGAACAAATATCAGAGATCACTGAGGA
TGATGCCAATGACAAAGAAatagAGGATGAACCAATAGAAACTAAAGTTG
AATTGAATAATTCACCACCAACAGACTCTGAAGATGAAGCTCCCGAGGGG
ATTTCTTTAAAAGACAGTCGTAAGAAAGCTATACAAATTCAACAAGACAT
CTCTGAtgctaaaaaattgaaaaaatcacatcaaaaacaagtggtccaag
atcgccaaaagaaaaatcGTCAACAGCAAGAAAAGTCTAAGAAGAAAAGC
CATCAGTTACCGGATAAGATTTCAGAGGATGTTTTGAAATTAGTACAGCA
AGAGGCTGAAGAGGAGCAAAATTCAGATTCTGAAATGGATATAGATGAAC
TGTTAAACCAAATAGGTCAAGAGAAACCTGCATTTAAAACACAacctaaa
aatcagaaaattactTTTGAAGATGACGATGATCCTGGTTTTGATGAACA
ATTTCTTGATGAAGAGAGTGAGGATGACTTAGAATCAGGTTTACAAGCAC
CAATAACAGCACAGCATTTGTATTCCGTAGATAAGGTCAAAGGCATTGGT
ACTGATGCAAGAGAGTTTCTACAGCAACACTTTTTCGGTAAAAGACTCAA
ACGAGAAAAGAGATTaaaatccaatttcaaacaaaaagttgggtcgaaaa
agtctaaacaaattggtaaaaggaaaaagATTATATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:1130474..1135193 + |
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