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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:870204..875313+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.11006.1.p1 ID=MSTRG.11006.1.p1|Name=MSTRG.11006.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5110bp|location=Sequence derived from alignment at sc0000078_pilon:870204..875313+ (Clytia hemisphaerica_ch_hm2_pilon)
taaaaatagacaaaaaataaatgagaattaaaataataaacgacgatttc
atcaaagataaaattgaagaaaaaataataaagattgagtaagaaagtta
gaaagagagagagaCCGCTTCAATCAGATATCTCTAAGCGCAAAAATATA
TTCTTCTGTTCATTCATAATATGTCATCTCATATATGGTCTACATGGTAA
CtaagataaataaattttttcgaaataaattttttcattttgtatgtTCT
TTAGAGAGTGATAAAATGTCAATTATTCACAGTTAATATTTTGTTTTCGC
CGAACCATTAATCAGACATTACTCAAGACAAAAATCTATCGTTTAACTTG
GTAAGTATACTTTTTAActaatttcaaattaattattATCCCTATCCCTA
TCAATTAtccctaaaaatgtttttcatattttctaaaGATCAAAAAGGTT
TACCATGTGAAAGCTTGGCTAAACAACTCATAACTTACAAGGTACAACTT
TCCGTTGTCTATACGTGTttgttcaatttcaaaacagacaTTGGAATCAA
CAAGATAAATTATCcccaaattttcaatgttttttgctgaattttgctAA
ATTAAGACGGAaaagtagactggagtcgtttataatgcgtgtaatacagt
agtataggcgttatatgataatacaattattgttacgggatttacttttt
gctttatttctactagtcgtctagcttgctagactagcgGAAAAATCTCT
TTGGACTTCAcagagacggaaatccgtccgAGACCGAGAGCAGCGACAAC
CGTTATAATAAGAAATTAAGGCTAAAATGGGTTGTTAAATTCTTCTTTGG
AAATGGAGAAATAGAtttaattttcacaaaaagtctTGCATTTCTGACCA
TGTCGAAATTGATAAAGCGGCGATaacgaaaaaaaagttaaggTTTTACG
GTGTCAAACATTCGTTACGGTGACAAAATATGGATTTTTTAACACTATTT
TGCTATCGTTGTTGGGGGTGGTCTAAGAAAAACGTGTCGGTATCTCACAC
ATAACCACGTATACCCTTTAAAGAGTGGTTATATCTTATAATGGTACTTG
CAAGGTACAAATCTTAGGTGTTCGTTTTCAAGTTTCGATATTTTAGTCTC
TATgtcaaatattcttaaaaaacaCTATACAACTTCTTTATTTCTAGATC
TCCGTAGTTGGGAAAGTAACAGGATGGAGAAAAACTTACGGCAGACGACA
TACGATGACGATTTCGACATGTTTGGAGAGGTTGTGAACGACGTGgctca
aagaaaacaaaacgaAGAAAACTTCTTCAATGTTGAAACTAAACCAAACA
CTCCTCCAACAACAAATCTACTTATGGAAGTTAATTCAAGCGAAAGCCCA
GCTGTATCAAGGCAAAGCGTATATCTTGACGGCACTTTGACGCCAAGTGC
CGCCAGAGCTCGAACAGGGTCCTCAAGATCCGCCTCGAACTTATCCATGG
ACGGCTTTGAAGGAATAGAGACAGAACGAGAACACAATTTTTCGTATGAT
ATCAGAGACTCGTTTGATGATATTGAAGTTCAAAGCAGACTAAGTCGTCG
AACAGATTCGGATCCTGTAGTTGAGCGGTTTTATAACGATTCGATTATTG
AAGAAACAGTAGGAGAAAAATCCATGGAAAAGAGGCTATCAACACCAGAT
GCAGTTATAAGCCGGCGGAATACTCCAAGTAATGAGACAATCGAGCATAC
AGAAAATAACCACGACAGAGAAATTGCAACTccaacttctgaatacagtc
cAAGGAATAATTTCGACGAACCCCATAACAAAGATACGCTCGCCATCAAC
AAAGGAGATTATATTTCAGTGGAAATAAAGAAGAGTGAAACACCATCATT
ACAAGAGAAATCTGATAGCCCCAGAAATGATTATGACAACATTGAGAATA
ATGAAAAAGACAATAAATTGAATCGGTCTTCATCAGTTGAAAGCCCGAGA
GAAAATGTAGATAAAGCCGAGGACACTACGAGCGACAATAATGATGATAA
CGACCATGAAACCGAAAAAGAGTCCGAGAGTCACGAGCAAACCTATGAAA
GCCCGAGAGAAAATGTAGATAAAGGCGAAGAAACTATGAGCGACAATAAT
GATAACGACGATGAAACCGAAAACAAGTCCGAGAGCCACGAGCAATCTTA
TGATAAAACAGACCAGAGTGATTTCAAAAGCATACTCCATTACAAAGATT
CTCTCGaagctgaaaatgaaaaatcaactgAGAAGAAGACCGAGAATTCC
ACCGATAAGGACTATGAACAAAACGATAATCAAACTGAGGAGCGAGAAAT
ATTGGAGGATGAAAACGAGAGTTTGACCGAAAACGAGGGTGCAGACGAAG
ACGAAAATATCGAATCAGAAACCACTCCTAGAGATGAGGACTCTCGGGAA
AAGGAAGACGATAATACCGAACGAGGAGAAATTTATCGAAACATCAAGGA
AGTAAACAATGATTTTAACGAAgtcaaaaaagggaaaattaaattatcta
gtggaaaagaaatcaacgaaaaatTCGAAGAGGGAGATTCAGGGAACGAG
TCTAATGCTTCAAAAGAGAGTTCCATTGCTATGACGACCgaagaaaacaa
attaataaaaaatgaagatggtgaaaatgagcagtcgaaaagtgaaaaCT
TAGTGAATGGTATACCCCaggagaaaaaagagaaaaataatgatGATTTG
GATGAAGATAAGGAGGGTTCAGAAGGGAAACCCGAAAAATTGACTCTGTT
GGAAGATATGATgagagatttacagagagaaattgatgaggaaaaagaag
agcctcaaaagaaaaagaaaactgtGATTTTCAAGAGGGACGGTGATACG
TATGATGAAAAAGGAGATCGAAGATATGATATGAGTGCCCTGGAGATGGT
CAGTGAGGATGAAAATGAATTCGTTAATCTTCAGGAAGTACAACAAGCTC
GGATCGAGTTAAATGATTATGCAAAGGACCTTGATAATTTCAATCATATC
ATCAATGAGTTAGAGAAAACACCTGAAGAGAAAAGAATGGAATCAAATCG
AAGTTTGACATTCGATTTGGGTGACTTGGGAATCGATGATTTTGAAGATG
AGGAAAGAGAAGGTAGTACTAATCGgaaaacaccgaaaaaagcgaaaaag
ataaagaaaaagaagaagaaaactgATGTTGTTTACAGCAAAGTCTGCCA
AAAATGTCGAAATCCAATCTTCAAGAAAGATTCGTATTTAGAactgaatg
aaattttcagtgaCAGTGTTTTATGTAAAAAATGTTTGGCTGGTAAATCG
AATAATAAAGGAAAAGAGAAGAAGATTGAGAAGTCACCGAAACATGATAT
TGGGCGGATTAAAGCCGAAGTTAAGCCAGCTTTAGATTCTCGACTGGAGA
AAAGTGAAAATACTGCATTACAGAAATGGTTGGAGAAAAAGAGTAAAGAG
GAACGAGTGAGAAAAAGGCAAGAGCGGAGAgaacggaaagctaaagctaa
agaaataaaacagaagaaacgcgaagagtcggaaaagcagaaaatggtga
aacaaaaagtcgatgattgggaggaaaaaaagaagaaagaagctaaagaa
aacaaaaagagggagaaaaTTTCTTTGCTACTCAACAGTGATAAATCGAG
ACCTATTTTACATTCACAGAATAGAGGATCGAACAGCTCTTATATGAGTA
CGTCGGCTACGGACAGTCCAAGAAGTAATGCAACGTTTGAAGTCACCGAG
GAGAATTCGTTTGAAAAGTTTCGTGAAGACTTTTTGCAGCATTCTGAAGC
AACTCCACCATCGGAATTGACCTATGGGTCTGTCAAAGATTTCGTTCAAT
CCGTCATTCTCAGTGCTCTCTTAGAGATCGAAAAAGAACAATCGCATCCA
AAACCACTAACCATCAAGCGACCAAAATCGCACGCACCTGCGCTCCGAAA
CCAACAACGTCACCTGCAACCCAGACCACCTCCTCCCAAAAGTGCGCACG
CGCGGAAATCACAAAATTTACCATTAAGAAGAATTAAAACTAAAGAACAT
ACTCAATCCAACAAAAACGTCACTCCAAAAGGGTTAATGCGAGCGAAAAC
CTATGACGAGTGgatgtttgataaaaaagttcaGCGCGGCGTGaaagaaa
aggagaaagaaatcAACGAACATTACGATTTACTGCAACAAAAGTTAATC
GAACTGGAGAAAGACCGTAGGAATGCTTTATATCATCTACGAGAGTCTTC
CATGATAGAATATCATCATAAACAGTTACCATTACTTTCCAAACGACTGG
AGCCACAAGGAAGTGAATCGTCGTCTATAAAGTCGTACCTTTCCAATTTA
TGATATGTTATGATACATTGGAATTGGAAGGATCTGTAGGGTTGCTTCAT
GTTGCTGTATATACTACGGCCTACTATAAAACTACATAATATGGACGAAT
CGTCtaaaataattaatttgaatttttttaatatctaGATTTAATTTTAT
CAATATGTGTTATAACGTCGTTCTCCGTTAGGCAAACCTTTTTAACAAAC
ACTTCAAAGACTTCTTTTTGGGTACCACTTTAAAGTTGTGCTCACTGGAT
GCGAAACAGAACATTGTCAAATTCCAGACTGATATCACAGATGTAATGat
tatttccatttttataaatttgcaataaagGAGAGGTTTTCTGATGCCAG
AACAGATAACAAGATTGCATTTAATTGAGCCTAATCTAACCATGTTCAAT
AAGGAAAGTATGGACATTTTAAGAATCccgtaaAttttttattgcttcAA
TCGTAAACGCGAACATTAAAACCTTCCTAAAATTTGTTTGGTAGTAAATA
TTGAAAGTCAATCTTACCTTTTGATCTGATTTCTCATTACGTTTTTGTCC
ACATTTCCACCAATAGCATTCAATCTTGTTAGCTCCAGCACCTTTTgtta
atcatttttttattctgTTAATCTTATTATTTaactaaaaaggaaaatat
aattttcaaaacatttTATAGCAATACCTTGCACAGTTTATCGGTTATtt
gtatgaaaaa Coding sequence (CDS) from alignment at sc0000078_pilon:870204..875313+ >MSTRG.11006.1.p1 ID=MSTRG.11006.1.p1|Name=MSTRG.11006.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3180bp|location=Sequence derived from alignment at sc0000078_pilon:870204..875313+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAAACTTACGGCAGACGACATACGATGACGATTTCGACATGTT
TGGAGAGGTTGTGAACGACGTGgctcaaagaaaacaaaacgaAGAAAACT
TCTTCAATGTTGAAACTAAACCAAACACTCCTCCAACAACAAATCTACTT
ATGGAAGTTAATTCAAGCGAAAGCCCAGCTGTATCAAGGCAAAGCGTATA
TCTTGACGGCACTTTGACGCCAAGTGCCGCCAGAGCTCGAACAGGGTCCT
CAAGATCCGCCTCGAACTTATCCATGGACGGCTTTGAAGGAATAGAGACA
GAACGAGAACACAATTTTTCGTATGATATCAGAGACTCGTTTGATGATAT
TGAAGTTCAAAGCAGACTAAGTCGTCGAACAGATTCGGATCCTGTAGTTG
AGCGGTTTTATAACGATTCGATTATTGAAGAAACAGTAGGAGAAAAATCC
ATGGAAAAGAGGCTATCAACACCAGATGCAGTTATAAGCCGGCGGAATAC
TCCAAGTAATGAGACAATCGAGCATACAGAAAATAACCACGACAGAGAAA
TTGCAACTccaacttctgaatacagtccAAGGAATAATTTCGACGAACCC
CATAACAAAGATACGCTCGCCATCAACAAAGGAGATTATATTTCAGTGGA
AATAAAGAAGAGTGAAACACCATCATTACAAGAGAAATCTGATAGCCCCA
GAAATGATTATGACAACATTGAGAATAATGAAAAAGACAATAAATTGAAT
CGGTCTTCATCAGTTGAAAGCCCGAGAGAAAATGTAGATAAAGCCGAGGA
CACTACGAGCGACAATAATGATGATAACGACCATGAAACCGAAAAAGAGT
CCGAGAGTCACGAGCAAACCTATGAAAGCCCGAGAGAAAATGTAGATAAA
GGCGAAGAAACTATGAGCGACAATAATGATAACGACGATGAAACCGAAAA
CAAGTCCGAGAGCCACGAGCAATCTTATGATAAAACAGACCAGAGTGATT
TCAAAAGCATACTCCATTACAAAGATTCTCTCGaagctgaaaatgaaaaa
tcaactgAGAAGAAGACCGAGAATTCCACCGATAAGGACTATGAACAAAA
CGATAATCAAACTGAGGAGCGAGAAATATTGGAGGATGAAAACGAGAGTT
TGACCGAAAACGAGGGTGCAGACGAAGACGAAAATATCGAATCAGAAACC
ACTCCTAGAGATGAGGACTCTCGGGAAAAGGAAGACGATAATACCGAACG
AGGAGAAATTTATCGAAACATCAAGGAAGTAAACAATGATTTTAACGAAg
tcaaaaaagggaaaattaaattatctagtggaaaagaaatcaacgaaaaa
tTCGAAGAGGGAGATTCAGGGAACGAGTCTAATGCTTCAAAAGAGAGTTC
CATTGCTATGACGACCgaagaaaacaaattaataaaaaatgaagatggtg
aaaatgagcagtcgaaaagtgaaaaCTTAGTGAATGGTATACCCCaggag
aaaaaagagaaaaataatgatGATTTGGATGAAGATAAGGAGGGTTCAGA
AGGGAAACCCGAAAAATTGACTCTGTTGGAAGATATGATgagagatttac
agagagaaattgatgaggaaaaagaagagcctcaaaagaaaaagaaaact
gtGATTTTCAAGAGGGACGGTGATACGTATGATGAAAAAGGAGATCGAAG
ATATGATATGAGTGCCCTGGAGATGGTCAGTGAGGATGAAAATGAATTCG
TTAATCTTCAGGAAGTACAACAAGCTCGGATCGAGTTAAATGATTATGCA
AAGGACCTTGATAATTTCAATCATATCATCAATGAGTTAGAGAAAACACC
TGAAGAGAAAAGAATGGAATCAAATCGAAGTTTGACATTCGATTTGGGTG
ACTTGGGAATCGATGATTTTGAAGATGAGGAAAGAGAAGGTAGTACTAAT
CGgaaaacaccgaaaaaagcgaaaaagataaagaaaaagaagaagaaaac
tgATGTTGTTTACAGCAAAGTCTGCCAAAAATGTCGAAATCCAATCTTCA
AGAAAGATTCGTATTTAGAactgaatgaaattttcagtgaCAGTGTTTTA
TGTAAAAAATGTTTGGCTGGTAAATCGAATAATAAAGGAAAAGAGAAGAA
GATTGAGAAGTCACCGAAACATGATATTGGGCGGATTAAAGCCGAAGTTA
AGCCAGCTTTAGATTCTCGACTGGAGAAAAGTGAAAATACTGCATTACAG
AAATGGTTGGAGAAAAAGAGTAAAGAGGAACGAGTGAGAAAAAGGCAAGA
GCGGAGAgaacggaaagctaaagctaaagaaataaaacagaagaaacgcg
aagagtcggaaaagcagaaaatggtgaaacaaaaagtcgatgattgggag
gaaaaaaagaagaaagaagctaaagaaaacaaaaagagggagaaaaTTTC
TTTGCTACTCAACAGTGATAAATCGAGACCTATTTTACATTCACAGAATA
GAGGATCGAACAGCTCTTATATGAGTACGTCGGCTACGGACAGTCCAAGA
AGTAATGCAACGTTTGAAGTCACCGAGGAGAATTCGTTTGAAAAGTTTCG
TGAAGACTTTTTGCAGCATTCTGAAGCAACTCCACCATCGGAATTGACCT
ATGGGTCTGTCAAAGATTTCGTTCAATCCGTCATTCTCAGTGCTCTCTTA
GAGATCGAAAAAGAACAATCGCATCCAAAACCACTAACCATCAAGCGACC
AAAATCGCACGCACCTGCGCTCCGAAACCAACAACGTCACCTGCAACCCA
GACCACCTCCTCCCAAAAGTGCGCACGCGCGGAAATCACAAAATTTACCA
TTAAGAAGAATTAAAACTAAAGAACATACTCAATCCAACAAAAACGTCAC
TCCAAAAGGGTTAATGCGAGCGAAAACCTATGACGAGTGgatgtttgata
aaaaagttcaGCGCGGCGTGaaagaaaaggagaaagaaatcAACGAACAT
TACGATTTACTGCAACAAAAGTTAATCGAACTGGAGAAAGACCGTAGGAA
TGCTTTATATCATCTACGAGAGTCTTCCATGATAGAATATCATCATAAAC
AGTTACCATTACTTTCCAAACGACTGGAGCCACAAGGAAGTGAATCGTCG
TCTATAAAGTCGTACCTTTCCAATTTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000078_pilon | genome | sc0000078_pilon:870204..875313 + |
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