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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:741369..745786- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10996.1.p1 ID=MSTRG.10996.1.p1|Name=MSTRG.10996.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4418bp|location=Sequence derived from alignment at sc0000078_pilon:741369..745786- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCTTTCTACCCTCCGGAAACTTTGTAAACATTCGATTGAATAGCGAG
ACGAAATCATCTTGCTCCAAATCGGATTTTTGCTGGACAAGCTGCAGGAG
GTGTGTTTCATTTTTAAGAGGAGAGACTGCAAAAACTTGTACAACTTTCT
CTAAAATTTTATTATGGCACAAGTCAAGAGAAAAGTTCTTATCCCTGTCG
ATGGATCAGAAGATTCACAAGGGGCTTTCGATTGTAAGTTATAAATTTCT
TTCAAAATCTGCTATATACATTTGCATTTGGCTGCTTGAATGAAATCTAA
CAGGACCCTGCTGACGCACCGGACTGGCCGGTGTATTTGTATGATGGCAA
AAAGTATCCTTTCGCTACACCGGATGCAATAAGTCTGGTGTCAGTCCGGT
GTTGCATAGGTGAAGGCTTCTTCGTAAAGACGAAAGACATGCATCTATTT
TTCGGATCCGGCATGCGGGAATAGTGTCAGGACCTGCAGGCGACCTGGTA
GGGTTGGGTATGGGTGTGGTATGGGTGTGGTTACGTATCAGATTGGCTAG
GAATTTGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCGAAACAAGTAC
TCTTTTGAGATTTTCTCTAAATATAGTCTGGTCTGCAGTTTGTACAATAT
AAATAGCCGTCAGAAACACTCTCTCGGCATGAATCCGTAGCGCAGTGGAT
AAGGCATTGGGTTTCAAATCATCGGAACTTTGCATTTAGTGGGTTCGAAT
CCCACCGGTGGCGATCTGTCGGTAAGTCATTCAGTAAGTTAGAAAACATA
GAAAATAACTCACATAGAACCAGAAAGTCAGAAAAACTACGAACAAGAGA
CTGGAAAGTACGAAATAAGTCCAGATCTGTCTTTCATCTTTACGAAGAAG
CCACGACCTGTTGCATACAGGGAATTTTGAACGCCGGACATTTACGAAAC
AAAAAATTAAGAAACACTGGGCACACCGGACTGGTCATGTCTGGTGTTTT
GATTGTCCGATGGAAAAAAATATCCTTCTCCAACACCGGACATCCGACTT
CCTCAAGTCCGATGTAGAGATTGTCCGGTGTTAAAAAAAATTCTCATTTT
ACACCGGACTTTCGTGTGTCCGGTGTTCGTTAAGTCAGTCTGGGAAATCC
TCTCAATTGCACGCTTATCTTCCGAGGGCGTAAGCGCGCAATTGCACGGT
TATAATTTACGCCCGCTCCCGCCCCGGTTGAAATTGCTTAGGGATTTCAA
GGGGCTCAGAATTCTCTAATTCGGGCGAAGGCATGGTTTAACGGGCGTTC
CATTTTTACGGAATCTTCTTCTACGATAAATTTTGAGTAAAACTGCCCTA
GGCTTTTGAAATTCAACAGAGCTTTCGGAAGGAATTGCGTGTCAAAAATA
TAGGAAATTTTAAAGCGTGCAATTGCACGCTTACCGCAAAAGCCGTCACC
TAGCAAGCTTGCTTAACGCTTACCGCCCGTTTCAGAACAATTTCGATAAG
CGTTTATAAAAATTCTGCCATTTTGATAAAGCGTGCAATTGCGCGCTTAC
GGCGCGCTTTGATAAGCGTGTAATTGAGAGGATTTCCCAGACTGTAAGTC
CGGTGCGTCGGCAGGGTCCTAATCTAACTTTAAAGGCACACAGTCCTACA
GTAGAGCTGTGTTGTTTCGTGTCAGGGGCCCAAAAATTTGGATCAGTTAC
GACTCTCCCCCATGGTTTAGCTATAGAAATTTAGGAATTTATTGGGCTGT
AATGGACCATTCCATTTTTCTTTGCTTAGTGTCGATATTAGACCAACATA
TAAGGTAAGTGCGTGGTCGTTTGATTACTTTGATCATTATCGATTACTTC
GATAATTGAATTTATTAATTAGTATCGTCTGGTGTTTAGAATACGTGTCA
TGTTGAATAGTTTAAAACTCCAGCATTAAAACAATAGCATTAATGTAATA
ACTGTAACTTTGTGTAACATCATGCCATGTCTAATCCTGCCATAGCAACT
ATCTGGTCTGCAAAGAAGTTTGAGTGTTTTTTTTAACAGCTTTATACTCA
GGCAAAAGATCTATTGGGCCATTCTAGAAAATTTTGTTACTCCGGTCAGA
CGACGTGCATTTTTAATTTTTTTTTAGCTTCGGAAATGAATTTTGGTGAA
AACTTTTGCCCTTGAAAATTCTGTGTAGTCCGCCCCCCCCCCTTTTACAG
ACAAACCACTAAGACTGGGCTTAAAAAATCATTGGTTTGCTGTCACCCGA
CCCTAGATTTTAGAGGTGGGTTGGTCGGTCGGAATTTTTTTTATTTTGGC
GATTTATGATATTTTCGTCCATGGAAGGGTTAACAGTTTGTTTACATTTA
GGTAATTTTGAATAAAAAACAGAAGTGCTAGCAGGGAATTTACAATTCTT
ATGCTTGAGACAAACAAGATACGAGTTTTGATTTTTTATTGTTTGAAGTT
TTTGAAGGAAAAAAAATCTTCTTTAAAAATGGTAAAAAAAATTTTGGGTC
AGCAGCTTTTGAGATAGAGTCGGTCAGGTGAGGGCAAACCAAGTCTAGCC
TAAGCAAAGAAAAACTAAGACCACTAACTAAGCAAAGAAAAACAGTTTCA
ACCTTTCTATAAATTTTAGCTGCTAAAAAGGATGTCGGAATTAGAGGAGG
GGTGTCGATACTAGACCAACTTACGGTATGTGTTCCAAACCTCAATCAGC
TTATTTTCATCACTTTCTTTATTTCAGTTTATATTGACAATCTTATGAAG
AAGGATGATGAAGTTGAAATTTTACACATTCAACATACCCCTCATCTTTC
TGTCCTTAGCTTGCATGGTAGGTAAATTGAAAAACCGTTGTGACTGTAGT
ACAAGTTGACAAGACGACCCATAGTATGGCCCAAACATACCCCAAACAGT
ATCAGGGTCAAAATTGCCAAAGATTGTTTTCAGGCTTTAGATTTTCACCC
TCAAAAACCTGCCCCAACATGGGCTGACCATGTTCAGGTCATGTTTGGGA
CTTTCAAGTTCAAAATCGCCAAGTAAGCCTGAAAATGTTTGGACCATACT
GTGGGCTGTGAGCCGTCAAAGAGCCCATATTATATCTTAAAAGTGAGGTA
TAAAGTCTATTATTTTTCTGTTATAATTAACAAATTACAGAATTTCACAG
CTATGTTTTCATTTTTATTCAAATTTATTAAATTTTATTTTGTAGTTCCA
CATCAGCAATGCCTGCCCTTTTTTAACCTACATTATCAAATAAATGAAAA
ATAAGCTTTTGGCTTTTCACTAACGTTCTATATTTCTGTTTGATAGATCC
CATGAACATTCCTGTTGAAGAATGGAGTCACAAGCTTAAAGATGAAGTCA
AGAAATCACAAGCATTGATCGCCCACTATGAAATGTTGTGTGAACAAAAA
CACGTAAGAACATGTGTTTTTACTGTGAATTCATTTGCATTTTTAAGAAC
TATCTTCTTCCACTTTTGTTTGATTTCAATACTTTGACCATCTCTCTAAG
ATTTTTTGGAAGTCTATTGAGAAAACTGTTCTACTGTAATCACATTATTA
CAGTACAACAAGTTTTCAAATATTTTTAAAAAGTTCTTGTTTCTTGGAAA
ATTAAAAAAAGCTCTTTTTAAGGATGTGGATGATTCCAAAAGCTAATTTG
TTTTATTCTGATTTTCCAGCTGGCCAAAAAGAGTTTGTTGGGTTCCGGCA
AACCTGGAGAAGCTATCTGTGAAAAGGCTAAAGAATGTGGTGCAGATATG
ATTGTTATGGGTTCTCGTGGACAAAACGCTGTCCGCCGTACATTTGTTGG
AAGTGTCAGCGATTATGTTCTTCATCATGCTCATATCCCTATCACCATTG
TCCCTAGAAAATAGGTGACCAATTCTTTTTCATTGTTTATCAAAATATGA
TGACTAGATCAAGGTTATAATACAAAGATCACAATATAATGATTATGCAC
CAATAGAGTGGAACGGTATTATGCCATAAAATTGAGACAATATTATTATA
ATGCACATTATTAATGGGTACAATAACATTGGTACAATGGGTTTTGTATG
GATTACATTTGTTAGTTTTTAATGCACTTTATATTTTTTGAAGAGCACTT
CAGCTCCACACATTTCATATTTATGCATGTATGCTCATCTTTTAATTTTT
ATGTTATACATATGTTGTGCCTAAGTTTGAACTGTAATGTTTTTATATTT
TTTGTGATGCAAAGATTTGTGTTCTTTCACAGGTAACGTGATAGGAAATT
GCTTTAAGGTACATTTTATGTTTATTCAGACAAGACCTTGTTCATTTCTG
TGTTTTTTTTTACTTAAACACTTTGAACTTTGTATTATGATTTTTATTTC
TCTAGAAAATATTATATTTTATAACCAGTTTAATGCGGCATAGTAAAAGA
TAATAGAAGGACAATTTG Coding sequence (CDS) from alignment at sc0000078_pilon:741369..745786- >MSTRG.10996.1.p1 ID=MSTRG.10996.1.p1|Name=MSTRG.10996.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000078_pilon:741369..745786- (Clytia hemisphaerica_ch_hm2_pilon)
CTGGCCAAAAAGAGTTTGTTGGGTTCCGGCAAACCTGGAGAAGCTATCTG
TGAAAAGGCTAAAGAATGTGGTGCAGATATGATTGTTATGGGTTCTCGTG
GACAAAACGCTGTCCGCCGTACATTTGTTGGAAGTGTCAGCGATTATGTT
CTTCATCATGCTCATATCCCTATCACCATTGTCCCTAGAAAATAGATCCC
ATGAACATTCCTGTTGAAGAATGGAGTCACAAGCTTAAAGATGAAGTCAA
GAAATCACAAGCATTGATCGCCCACTATGAAATGTTGTGTGAACAAAAAC
ACTTTATATTGACAATCTTATGAAGAAGGATGATGAAGTTGAAATTTTAC
ACATTCAACATACCCCTCATCTTTCTGTCCTTAGCTTGCATGATGGCACA
AGTCAAGAGAAAAGTTCTTATCCCTGTCGATGGATCAGAAGATTCACAAG
GGGCTTTCGATTCTGGCCAAAAAGAGTTTGTTGGGTTCCGGCAAACCTGG
AGAAGCTATCTGTGAAAAGGCTAAAGAATGTGGTGCAGATATGATTGTTA
TGGGTTCTCGTGGACAAAACGCTGTCCGCCGTACATTTGTTGGAAGTGTC
AGCGATTATGTTCTTCATCATGCTCATATCCCTATCACCATTGTCCCTAG
AAAATAGATCCCATGAACATTCCTGTTGAAGAATGGAGTCACAAGCTTAA
AGATGAAGTCAAGAAATCACAAGCATTGATCGCCCACTATGAAATGTTGT
GTGAACAAAAACACTTTATATTGACAATCTTATGAAGAAGGATGATGAAG
TTGAAATTTTACACATTCAACATACCCCTCATCTTTCTGTCCTTAGCTTG
CATGATGGCACAAGTCAAGAGAAAAGTTCTTATCCCTGTCGATGGATCAG
AAGATTCACAAGGGGCTTTCGATTCTGGCCAAAAAGAGTTTGTTGGGTTC
CGGCAAACCTGGAGAAGCTATCTGTGAAAAGGCTAAAGAATGTGGTGCAG
ATATGATTGTTATGGGTTCTCGTGGACAAAACGCTGTCCGCCGTACATTT
GTTGGAAGTGTCAGCGATTATGTTCTTCATCATGCTCATATCCCTATCAC
CATTGTCCCTAGAAAATAGATCCCATGAACATTCCTGTTGAAGAATGGAG
TCACAAGCTTAAAGATGAAGTCAAGAAATCACAAGCATTGATCGCCCACT
ATGAAATGTTGTGTGAACAAAAACACTTTATATTGACAATCTTATGAAGA
AGGATGATGAAGTTGAAATTTTACACATTCAACATACCCCTCATCTTTCT
GTCCTTAGCTTGCATGATGGCACAAGTCAAGAGAAAAGTTCTTATCCCTG
TCGATGGATCAGAAGATTCACAAGGGGCTTTCGATTCTGGCCAAAAAGAG
TTTGTTGGGTTCCGGCAAACCTGGAGAAGCTATCTGTGAAAAGGCTAAAG
AATGTGGTGCAGATATGATTGTTATGGGTTCTCGTGGACAAAACGCTGTC
CGCCGTACATTTGTTGGAAGTGTCAGCGATTATGTTCTTCATCATGCTCA
TATCCCTATCACCATTGTCCCTAGAAAATAGATCCCATGAACATTCCTGT
TGAAGAATGGAGTCACAAGCTTAAAGATGAAGTCAAGAAATCACAAGCAT
TGATCGCCCACTATGAAATGTTGTGTGAACAAAAACACTTTATATTGACA
ATCTTATGAAGAAGGATGATGAAGTTGAAATTTTACACATTCAACATACC
CCTCATCTTTCTGTCCTTAGCTTGCATGATGGCACAAGTCAAGAGAAAAG
TTCTTATCCCTGTCGATGGATCAGAAGATTCACAAGGGGCTTTCGATT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:741369..745786 - |
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