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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:639078..642715+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10987.1.p1 ID=MSTRG.10987.1.p1|Name=MSTRG.10987.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3638bp|location=Sequence derived from alignment at sc0000078_pilon:639078..642715+ (Clytia hemisphaerica_ch_hm2_pilon)
TAAATTTGTCGTTTTAATAAAACATAAATCAGTCTCTAACACGAGTGTTG
CAAAGCGGGCGATAGCTGACGAACATTGAAGTATTTCTACCGAGTATTGG
AACCGAGAATATATCgtttatttgctttttttttgacttgttgACGAGTT
TATATAAAACTAAGGTAGGCGCTTTATGTGACTTTTATGTGTGTTGATGA
CAGACAAGTTAAAACGTGTATGCGTTTCCTAtcgaaatatgtcatatttc
CTTTTACCCGGAAATTATAATATTTCCTAGTTTCTATTCCGGAAATAACT
TGCCATTTCTCACGCAATCTCTATCATTACTGAATAATATTATGCAAAAT
GCTACTTTTAAAGGCAGCCAGCATGAAGATGACCTTAGTACCTGATTTTC
ATAGCGCTGTTGATCTCCTTATTGCGCCAAATTACTTTTGGTGCAACACT
ATAATTTAATTTGCTGCCACCCGGTAACAAAGAAAAAGTATCCAAAAACC
TTTTCGGaatctgatatttttttatttgagattCTTCACACAACGTTGTC
TCGATGTCCatttaacgttcataacgtccataatatgaacgttgaaacaa
agtTATGTGTCTATTAAAGAGTTagcccccttctcacagacccagtagga
tttcttcagccagtgggggtaaaaataacggactgaagcTTGATAGGGAT
ATTCCAATATTCTTTGTGGCTAGGGATTTAAATTCTAatgttttcaagtc
ataaaattcagtggggatggaaaaattaGCATTTAGGATATTTCAGTTAG
GATAGGTTTATTTGACAAAACTTGGAGTATAATtatccactggggacgat
attgtGGTCAATTTTCCCATAGTGGGAAGAGGCTCTAGTGGGAGAAGGGG
GTATAAGAATGCTTGCAGCTGTTTTGTAGATGAACCTGTGCATCGAAACA
TCGAAATTCAAATAGAGTGAGCGGATTAATCGATCAAGAAAATAATGACA
GTCATTTATGGTCATTTGATAAATCATTAAGTTAAGTTACATCATGCAAG
tttcatggaaaatattttctatgtGGGTTACGCGATGAATAAACCTGCAA
AAACAAGCAACACATTACTTTAACACTAACATTTCTCTCTCGCTACACCT
TTTGTTTAAATAGTTTTCTGACTCCCACGAGTATGGTATCCACTTATCCA
GGCCTTTATAAGTCTCTGAAACTGACATCGGCACGATACAGAAAAGCAAA
TATGACTTATCAAAACATATATATTTTCAACTCAAAGTTCCTAGTTTTCG
GGCCCCACTGCGTCTTGTTAATATTTTCCCGCCTCCACAATTTTCGTTTC
GGTTTCAATGACCTATAGTGGTATATATTAAAATTTTCCCTATTTCATTA
TTAGATCTGTGTTTAAAACCTTAAATCCatcatttttgatattatttacT
TTGACAAAATAAACCTTTCTCAgaataatattttttagaaacGAAAATTT
TTCCGCTTTTCATTTTCGAAATATACTTATGACAGTATGAATTAAATGAT
ATAAATTCAATTGTTTTTAGCTTCTGAAATGGCATTTCCAGATTTTCCAC
TGACGAATGAAGACAACACAGCAACTGCAGATCAGTACACACTCAGCCAC
CATAAAGATTTGAATAACAACTCAACGGAACACGTATCGGCCACCACACA
AGAACATATCAGAAACATTTCAAATCTTAACATTTCGAATAAAAGtatct
tggaaaaattcgaagcGATGAACAAATgtattgattattttcaacaacAG
CTGCAAGAACATAAAGGCTCTATCAACGAACTTGAATTTAGCTTAACCTC
GCATAAACGAACTCAAGGTAAGCCCATGATAAAATTCTATAATCACATCT
TACTGATTCTTACGGCTAGAAGAGGATAGAAGAGCAGACCTTAATTCAAA
CAGGGTGGAAAATATCTCTCCTTTACAGTTAAAAAATATCTCCAAACTTT
ATTGACTTCACAGCTTTCAGGAGTAATTTTTCCATAGGGCTATTACCACG
GGGTGTAGCTTTAAAATTGaaactatttgaaattttatgtaTGACCTGTA
GATTTTTTGGTAAAGAGTTCTTCCGCAATATCAAGGATAATCcaaattaa
tttttctcaaattgtttCATTCAGGACCCAAAGAGGATACTGATGACGAC
TTACATTACGAGTCTGGTTGCGGTTTATTCCCTTTTATCCAAAAATGTCT
GTTAAACGAGACCAAATACTACGATACAATTCGCTGGGTAAACAAGGCCG
AACAAGAATTCAAAATCGTGGACCCTGATAATTTAGCGACACTTTGGGGC
CAAGAAAAACGTAAAGAGGGAATGACAAAGCGTAAACTGACCAGAAGTTT
GGCGTATCTCGTAAACGCGAAAAAGAAGTTACGCCGCTCATCTTCACGCA
CATTCATCTATCAAATTATCAATAAATTTGGCAGAAGTATGTGTCCCTCA
CCTGAATCTAATTGGGAAGAATCGCCAACCACCCTTGAGAAATCTCAACC
AACGCCCACCATggaacaaatgaaacaaatattACGACAAAATCCTAAAT
ATTTACAAGTCTTGATAGAcgttcaaaaacaacaaaaagaatcAATTGGG
AGTAAGAATATCCTAAAAGCTGGTTCCAAACGATCTTCAAATACACAAGA
CCAACAGGTTCCAGAGAAATCAGTCAAATTGAACCAGGAATCTATCTTCA
AGACTCCCCAGCAGCAATCACAAAACAACTTCATTGATACAGCTTCATCT
TTTAACTGGTCCCAATCATATAATAACAATAACTATTCACCATCACCGGC
TAATGACAGTTATGTCAGTTTTAGCCCTCTCTCAACCTCATCAGATGGCA
GCTCAAACTTTAGTCAAGTTTGCGATGGTAACAATAATTTCATGTCAACA
ACTACTTCAAACTTTGTCTCTTTGTCTGACTCatcaaattcaatcttttc
tGGCGATTCACTTTTCAATTCTGGTAACTCTTCATCTACTCTTTTCAACA
ATAATTCCACGTCAAATTTCATGCAGCAAATGTCCACGACAGTATCTACG
GTGAATTTCACACCAGAAAATTCAACCTCAAGTATTTTTACTACTCCTGT
TAGTGACACCAACAGCTATAGTCAACAAGTCACATCAGTACCTACAAACT
TTACAAATCCAATCGCTCATTCGTTGGTCAGCGATGTTTCCGATATTGGA
TCTATTATTCCGACATTCTGTTTGAATCGGAATTCAGGATTGAATAATGA
CATTTTTGCTTATCTTCAATAATTTTGTAAGAAGAGCTACTTAGgaatca
tattttttataaagttttcttCATGTACATATTCTTTTATAATTTTAGTG
AGAATATAATTTCACTTGAAAAATCAGATAGATGGGAGAAATTTATTATT
AGACGCTACTATAGATGTAGTTTAGTAAAGTACTACTTCGTAATCCTTCA
TAATCTCAATTTGTATTTAGTTGACAGGTAATCTTTCTCTTATGCCTATT
AAAagtttgtaaatatttctttaccGTAAAAAAGATTGTACATATATACT
TTTTGCATAGATTCAAAAATGCTCATaacattttgaaa Coding sequence (CDS) from alignment at sc0000078_pilon:639078..642715+ >MSTRG.10987.1.p1 ID=MSTRG.10987.1.p1|Name=MSTRG.10987.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2874bp|location=Sequence derived from alignment at sc0000078_pilon:639078..642715+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTCCAGATTTTCCACTGACGAATGAAGACAACACAGCAACTGC
AGATCAGTACACACTCAGCCACCATAAAGATTTGAATAACAACTCAACGG
AACACGTATCGGCCACCACACAAGAACATATCAGAAACATTTCAAATCTT
AACATTTCGAATAAAAGtatcttggaaaaattcgaagcGATGAACAAATg
tattgattattttcaacaacAGCTGCAAGAACATAAAGGCTCTATCAACG
AACTTGAATTTAGCTTAACCTCGCATAAACGAACTCAAGGACCCAAAGAG
GATACTGATGACGACTTACATTACGAGTCTGGTTGCGGTTTATTCCCTTT
TATCCAAAAATGTCTGTTAAACGAGACCAAATACTACGATACAATTCGCT
GGGTAAACAAGGCCGAACAAGAATTCAAAATCGTGGACCCTGATAATTTA
GCGACACTTTGGGGCCAAGAAAAACGTAAAGAGGGAATGACAAAGCGTAA
ACTGACCAGAAGTTTGGCGTATCTCGTAAACGCGAAAAAGAAGTTACGCC
GCTCATCTTCACGCACATTCATCTATCAAATTATCAATAAATTTGGCAGA
AGTATGTGTCCCTCACCTGAATCTAATTGGGAAGAATCGCCAACCACCCT
TGAGAAATCTCAACCAACGCCCACCATggaacaaatgaaacaaatattAC
GACAAAATCCTAAATATTTACAAGTCTTGATAGAcgttcaaaaacaacaa
aaagaatcAATTGGGAGTAAGAATATCCTAAAAGCTGGTTCCAAACGATC
TTCAAATACACAAGACCAACAGGTTCCAGAGAAATCAGTCAAATTGAACC
AGGAATCTATCTTCAAGACTCCCCAGCAGCAATCACAAAACAACTTCATT
GATACAGCTTCATCTTTTAACTGGTCCCAATCATATAATAACAATAACTA
TTCACCATCACCGGCTAATGACAGTTATGTCAGTTTTAGCCCTCTCTCAA
CCTCATCAGATGGCAGCTCAAACTTTAGTCAAGTTTGCGATGGTAACAAT
AATTTCATGTCAACAACTACTTCAAACTTTGTCTCTTTGTCTGACTCatc
aaattcaatcttttctGGCGATTCACTTTTCAATTCTGGTAACTCTTCAT
CTACTCTTTTCAACAATAATTCCACGTCAAATTTCATGCAGCAAATGTCC
ACGACAGTATCTACGGTGAATTTCACACCAGAAAATTCAACCTCAAGTAT
TTTTACTACTCCTGTTAGTGACACCAACAGCTATAGTCAACAAGTCACAT
CAGTACCTACAAACTTTACAAATCCAATCGCTCATTCGTTGGTCAGCGAT
GTTTCCGATATTGGATCTATTATTCCGACATTCTGTTTGAATCGGAATTC
AGGATTGAATAATGACATTTTTGCTTATCTTCAATAAATGGCATTTCCAG
ATTTTCCACTGACGAATGAAGACAACACAGCAACTGCAGATCAGTACACA
CTCAGCCACCATAAAGATTTGAATAACAACTCAACGGAACACGTATCGGC
CACCACACAAGAACATATCAGAAACATTTCAAATCTTAACATTTCGAATA
AAAGtatcttggaaaaattcgaagcGATGAACAAATgtattgattatttt
caacaacAGCTGCAAGAACATAAAGGCTCTATCAACGAACTTGAATTTAG
CTTAACCTCGCATAAACGAACTCAAGGACCCAAAGAGGATACTGATGACG
ACTTACATTACGAGTCTGGTTGCGGTTTATTCCCTTTTATCCAAAAATGT
CTGTTAAACGAGACCAAATACTACGATACAATTCGCTGGGTAAACAAGGC
CGAACAAGAATTCAAAATCGTGGACCCTGATAATTTAGCGACACTTTGGG
GCCAAGAAAAACGTAAAGAGGGAATGACAAAGCGTAAACTGACCAGAAGT
TTGGCGTATCTCGTAAACGCGAAAAAGAAGTTACGCCGCTCATCTTCACG
CACATTCATCTATCAAATTATCAATAAATTTGGCAGAAGTATGTGTCCCT
CACCTGAATCTAATTGGGAAGAATCGCCAACCACCCTTGAGAAATCTCAA
CCAACGCCCACCATggaacaaatgaaacaaatattACGACAAAATCCTAA
ATATTTACAAGTCTTGATAGAcgttcaaaaacaacaaaaagaatcAATTG
GGAGTAAGAATATCCTAAAAGCTGGTTCCAAACGATCTTCAAATACACAA
GACCAACAGGTTCCAGAGAAATCAGTCAAATTGAACCAGGAATCTATCTT
CAAGACTCCCCAGCAGCAATCACAAAACAACTTCATTGATACAGCTTCAT
CTTTTAACTGGTCCCAATCATATAATAACAATAACTATTCACCATCACCG
GCTAATGACAGTTATGTCAGTTTTAGCCCTCTCTCAACCTCATCAGATGG
CAGCTCAAACTTTAGTCAAGTTTGCGATGGTAACAATAATTTCATGTCAA
CAACTACTTCAAACTTTGTCTCTTTGTCTGACTCatcaaattcaatcttt
tctGGCGATTCACTTTTCAATTCTGGTAACTCTTCATCTACTCTTTTCAA
CAATAATTCCACGTCAAATTTCATGCAGCAAATGTCCACGACAGTATCTA
CGGTGAATTTCACACCAGAAAATTCAACCTCAAGTATTTTTACTACTCCT
GTTAGTGACACCAACAGCTATAGTCAACAAGTCACATCAGTACCTACAAA
CTTTACAAATCCAATCGCTCATTCGTTGGTCAGCGATGTTTCCGATATTG
GATCTATTATTCCGACATTCTGTTTGAATCGGAATTCAGGATTGAATAAT
GACATTTTTGCTTATCTTCAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:639078..642715 + |
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