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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:487321..489973+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10977.1.p1 ID=MSTRG.10977.1.p1|Name=MSTRG.10977.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2653bp|location=Sequence derived from alignment at sc0000078_pilon:487321..489973+ (Clytia hemisphaerica_ch_hm2_pilon)
gcattttcgtcactttggtcacatgttcaaaacaaaacagttcaaaacaa
aacaaaccaaacaaaaagaATAATGGCGATTTTGTAAGTGCAGTCTGCGT
GGTTTTATTTTTCTGTATACATTTGAAACGTTACCAAAACATAAGATAAG
AACAAAGTGATTGTCGGATTTCGACCTTTGAAGAATGATGAATAAATCAT
TTGATCGTAAACGCGCAAGAAAAACAAAGCAAGGTAAACATTGGAGAGTC
attttggtttgtttagattttttgctcaaacttttggtctcatattttat
tttctcagatttAACTGATTAAGTTGGTATGGTACCCGTGGAGGAGGGTA
CTGGTGTTGCAAGCTGACGGGGTGTGCCGCCCGACTTGCGACCCTTATGG
ACCCTtagcaaaggaaaattttgtgaattttactaCCCTTATCCACCTTT
ATTGGGActatttgaccaaattttgatctttctctcggagcaaaaagttg
aaattctcTTACTTTTCTGACCCTTcatgggactgaagtttgatttttgg
atttttcttatttttacagCCAGACTCTCCCACTCGTCTAAAATCTTGAG
TATGGATTGATAATcggttatttttttcattgaatggCTACCGATTGTGA
TCTATCTATCATTTTAGAGTCAATCGATGACTAATGAAACAATCGATAGG
CGATCGAGTCTCCCATAAAATCCTGATTATCGATTCATTATCGATTATTG
GAATCAATCAATATTCAATCAATCGATTGGTTATCGATTAGCCGATTAGT
CAtcgattggaaaaagttatAAATTGTATTGAGTCGGAGAGTCTGGTTAC
AGGGACTGCCAGGTCCCaaaaaaagcacccttaagggcggcataTACCCG
TACCCTCATTTTGTCTAAGTACAAccccccttccccggttcccctggttc
cccAGGCCCAACATCCGGGCTACGGTTCACAAAGTTGTGgattcaacccc
cagccgggtcataccaaagattcttaaaatggtacttgatgcctctctgc
ttgatgctcagcaattaagagtaggatcaagggtaagtggagcaatccag
ggagaaagagtggcgccctcccctaccttcgggtagatagctatcgaaag
aggagccttcgggtcgcctccgactgcggttgcAGACTTACTTACTTCCT
AGGTTAAAAGCGTTGCCTAATAAAAGGCTTGTCGGGGACTATCAAAAAGT
CCCCACCGGTCATTGAGAGGGCGTGCGTTACCCTTGCTGGCCAGCGGGAT
TGTTCTGCTGAGGTTCGAAAAATCGACCCTACATGAGAATCGTTTTTTGA
AAAAATTTGGCCAAAAGTTGAGAAAAAAAGAACTCGGGAATTCCAGACTA
CGGTGTGATGGAAATATGAGAAAATATTACCGAATGGTAGAATTGGGTCT
CCTGCTACCTGTACCACAACCCCTTACGTCAAACGTAACATTCAGGGTCC
CTGTTATTCAAATATTAATTACCAGCACAGGGCTCAATTTTGAGCTTAAA
CTTCATTGTGCTCATTATTATCTTTGTGGACGAAATCACATCCATGCGGT
GAAAGCATTGCTTGGCTTCCGAGCTATGTGACTAACTAGTTCAACTGTAC
GTGTCTTGTCTTGTACTATTTTAAGTTgatacaattttttatttgcacAC
ATTCACATTGACTTTCTATTTAGAATTGGTTATCGAGAAGAAATTAAAGT
TCTTCGTTATGTCTGTTGCTTTCAACGGATCTGATGGTCATAAACTTCCA
AGTTTGAATGATTTATATGAAGATAGCGTGATAAGAAAAGAGGATCCGTG
CAATTTATTGGATAAAAAAGCCCGCTATCCTTGTGAGCCCACCCCGCTTC
GTGTAAGCGCTTGCTTAATGAGATCAATGACAAAACAAAACGATACACCT
CCCCCAAAGTCATACAGGACCCTTTCAAGTCGTCGACGAAACACGCAGCG
ACGCAATAACACCAGTGTCGTTGTTACAGGGCGCCATTCGAAGGAAAATT
CAACCACTACAGTTAAAGCACCGGGTAAAGTTGAACCACATGTTTTAAAA
CAGGACCATTCGCAAATTCTtgatgaaataaataaactctTTCAAAATAA
TTCAGCTCAAAAGAACGTCAGCGTTTTGAAACAGTTGTTATTACGTAGCG
CTTCTGAGCAACAGACGACTGCTTATAATCAGGCGAATCAAAAGAGACTG
CCAAGCGTgattaaagaagaaaataagaatgTTGGAATAGGTAATGACGA
GGTTAAGAAAACTGAAAGTTTACGAGAAACAGTATGGAATAACTCTAAAG
ATCAAGAAAGTGACAAGTTGATAGAAACAGAGGAAGAATCGGTTGAAATG
AAAGTCGTTAGTGAGGAAGAGGTCAAAAATCAAATCGAAacacctgaaaa
tgaaaatcaagaagATGAATTATCAGAGGAAAATGCCCGAATGCaagatt
gaaaaaatttctgtcaGCATAAAACTTATTGTTTTCATGTGCTTTATTAT
CGTACTTTGTTGATTTGAACCATTGGTCTTCATTttatacattaaaggaa
gaaattttggcggatggccaaaaaagttttttcagaagGAATCTAATTTG
GCG Coding sequence (CDS) from alignment at sc0000078_pilon:487321..489973+ >MSTRG.10977.1.p1 ID=MSTRG.10977.1.p1|Name=MSTRG.10977.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000078_pilon:487321..489973+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAATAAATCATTTGATCGTAAACGCGCAAGAAAAACAAAGCAAGA
ATTGGTTATCGAGAAGAAATTAAAGTTCTTCGTTATGTCTGTTGCTTTCA
ACGGATCTGATGGTCATAAACTTCCAAGTTTGAATGATTTATATGAAGAT
AGCGTGATAAGAAAAGAGGATCCGTGCAATTTATTGGATAAAAAAGCCCG
CTATCCTTGTGAGCCCACCCCGCTTCGTGTAAGCGCTTGCTTAATGAGAT
CAATGACAAAACAAAACGATACACCTCCCCCAAAGTCATACAGGACCCTT
TCAAGTCGTCGACGAAACACGCAGCGACGCAATAACACCAGTGTCGTTGT
TACAGGGCGCCATTCGAAGGAAAATTCAACCACTACAGTTAAAGCACCGG
GTAAAGTTGAACCACATGTTTTAAAACAGGACCATTCGCAAATTCTtgat
gaaataaataaactctTTCAAAATAATTCAGCTCAAAAGAACGTCAGCGT
TTTGAAACAGTTGTTATTACGTAGCGCTTCTGAGCAACAGACGACTGCTT
ATAATCAGGCGAATCAAAAGAGACTGCCAAGCGTgattaaagaagaaaat
aagaatgTTGGAATAGGTAATGACGAGGTTAAGAAAACTGAAAGTTTACG
AGAAACAGTATGGAATAACTCTAAAGATCAAGAAAGTGACAAGTTGATAG
AAACAGAGGAAGAATCGGTTGAAATGAAAGTCGTTAGTGAGGAAGAGGTC
AAAAATCAAATCGAAacacctgaaaatgaaaatcaagaagATGAATTATC
AGAGGAAAATGCCCGAATGCaagattgaATGATGAATAAATCATTTGATC
GTAAACGCGCAAGAAAAACAAAGCAAGAATTGGTTATCGAGAAGAAATTA
AAGTTCTTCGTTATGTCTGTTGCTTTCAACGGATCTGATGGTCATAAACT
TCCAAGTTTGAATGATTTATATGAAGATAGCGTGATAAGAAAAGAGGATC
CGTGCAATTTATTGGATAAAAAAGCCCGCTATCCTTGTGAGCCCACCCCG
CTTCGTGTAAGCGCTTGCTTAATGAGATCAATGACAAAACAAAACGATAC
ACCTCCCCCAAAGTCATACAGGACCCTTTCAAGTCGTCGACGAAACACGC
AGCGACGCAATAACACCAGTGTCGTTGTTACAGGGCGCCATTCGAAGGAA
AATTCAACCACTACAGTTAAAGCACCGGGTAAAGTTGAACCACATGTTTT
AAAACAGGACCATTCGCAAATTCTtgatgaaataaataaactctTTCAAA
ATAATTCAGCTCAAAAGAACGTCAGCGTTTTGAAACAGTTGTTATTACGT
AGCGCTTCTGAGCAACAGACGACTGCTTATAATCAGGCGAATCAAAAGAG
ACTGCCAAGCGTgattaaagaagaaaataagaatgTTGGAATAGGTAATG
ACGAGGTTAAGAAAACTGAAAGTTTACGAGAAACAGTATGGAATAACTCT
AAAGATCAAGAAAGTGACAAGTTGATAGAAACAGAGGAAGAATCGGTTGA
AATGAAAGTCGTTAGTGAGGAAGAGGTCAAAAATCAAATCGAAacacctg
aaaatgaaaatcaagaagATGAATTATCAGAGGAAAATGCCCGAATGCaa
gattga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:487321..489973 + |
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