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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000077_pilon:288366..290999+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10859.1.p1 ID=MSTRG.10859.1.p1|Name=MSTRG.10859.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2634bp|location=Sequence derived from alignment at sc0000077_pilon:288366..290999+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTTTTTTATGCCTTTCTTTTTAACTGTGTTTGCTTTGACTATTTAAAGT
TTCAACTATGTTATAATTGGTCTGTAATTATTTGTTCTTAATGAGTTATA
ATTAAGCTTGTTTTTATTACATGTCTTTCATTATCTCTGCTTTGAGGTCA
GGAAGTCTGCAAAGCTTTGTTTGCATGTTAAAACTATTATCTAAAGATTA
TAAAACTCAAGATTTGATATCttagatttttcattttaaacagTAAGAAA
GGTGAAGTAAAactaaatataaaaagaaaatgggTACTGATTTTTCAAAT
GCActgaaaaaattcaaactggtttttttAGGTGAACAGAGTGGTAAGTc
ttttgttttgcccttttctttattttaattcttgctttttgACTGGCGAA
AGACCTATCCACTCACATTGTTTaaacaacattttcaaataGTTTGGACT
AAATGGATAAAACAGGGATAAAACAATACTTTGTTGTTTTGgctattgaa
atttgatttttagatGAAGACACAGATCAATTTGGGTTTGAACATTCTGT
CATAAATGTTTGAGCCCTGATTTAtgaatttgcaatttttcttgctttag
tTGGGAAGACATCACTCATCACACGATTTATGTATGATAGTTTTGACAGT
ACATACCAGGTATAATAAATGTAAATTTATCCCTTTTACAATTATTCGAA
GATATTATTTTTCATGGTGAAcaaatgcaaatttttgctcgcaCAATGCT
GAGAGGAggcagtgaaagttattgtttcttttatttagaAATATTGTGTA
AGCAAATGATAGTTGATGTCCTTTTTTAGATCATCTTTCAATCTTTATTT
TGTTCCCTCCACTTCattacaatatttttattttctaggcAACCATAGGC
ATAGATTTCCTTTCAAAGACCATGTACTTGGAGGATCGAACGGTAAGTTC
TCTATCAACGATTTGTATCAGCTTCAAGCATCTGGCATTTGTTATTAACT
GAGTAGTTTTGTAATCCTAAACATATACTACACAATACTTTGTGTGTTTC
TACTACTTTCAAAGAGATAATAATTGTTTTCCTTTGCTCAGGTTCGCTTG
CAAATTTGGGACACAGCAGGGCAAGAGAGATTTAGAAGTTTGATTCCAAG
TTATATCAGAGATTCTTCTGCTGCAGTTGTTGTCTATGATATTTCAAGTA
AGTTTTATTGCAATTTGATATTCTTTTTGCAGATGTGGTAACGATAGCTG
GTGATGATGATACATATTTTCAATCGTCAAATTTGTATGAAATGCTTTAG
ActgatattgatatttttaatcgATTAGGTACAAATTCCTTTGCTCAAGT
AGATCGTTGGATAGAAGATGTCCGTGCAGAGAGAGGCCAAGATGTTGTTA
TAATGTTGGTTGGTAACAAAACAGATTTAACAGATAAAAGACGCGTTTCC
ATGGAGCAAGGGGAAAGAAGAGCTAAAGAATTAGGAGTTTTATTTATTGA
GAGTAGTGCAAAGACAGGTCATAACGTGAAACAGGTTTGTATTTGGGATC
AAACTCATCCATTGTCTTATTTTagctcaaaaagtttttgataattATAC
AACGTTAATCTTTTTCATATTCTTCtattgaaatatctttcaaagCTTCT
TGGGCTTCTACCATAAATTTGTTAAATCGGAATGAATAAAATCTAAACAA
TGAGTTTGTATCATTTTTAGCTATTCAGACGGGTTGCAGCAGCTTTACCA
GGCATTGACAgtaaagaagatgaaaaaccAAACAACATTAACCAAGTCAT
TCACCCAAAGATTGATGATGAGCCGCAAAGCTCATGTGGTTGCTGATCAA
TGTGATATATAGATTTTAGGCTTagaaattaatcaaattaatACCAATTA
TTAACAACAGTCGATAGTTTGGTCTTATTTGGAAGAAAGACACATTCTGG
AAAGAAAAAGAGATCTTGCTTGAAATGAAATGCCTTTTCAGTCAAATTGT
TATTCTGGCATTTTGCTTAAGGAAAGCACATGCCATTAATATGAAGGCTG
CTTTAATATTAGAGTTTGATACTTTGAATATAAAATAGGCCAACAGAACT
ATTATATCAAACTATCAAGCTGCCAGGATAACGCACATAGTGCGTAACAT
TGTCTTACCGTAATGATATCTTTTTAaggaagaaattgattttttgtgaG
AAGACcttcttttttatattatgaaaagTATTAATTTTCTTACCTTGTAC
agcataatatttttattttaaaagaaaacaaaaataaatatatattacag
agccaaatagttattttttaatatatagaaaaaGAAGTATACTAGGAGTA
TATTATACTTGCCCACCAGCATTTTAGcagtaaaacttttttatttcaat
aagTTATGTTATTATGATAAAAACAAGAGTACAAGTTAGATAAAAAACTC
AAGTCATAAAAGACATGATCTTAAATAAAAAGATTGAGTTTAAATCTGCt
ttgttttgtaaaattaaattttatttcattttttccttttttgattattt
atcatttttctttttgactatttatccaccagaatatagaaaaattttta
cttttcactCTTCAACATTTTCACTTGCTTGTCC Coding sequence (CDS) from alignment at sc0000077_pilon:288366..290999+ >MSTRG.10859.1.p1 ID=MSTRG.10859.1.p1|Name=MSTRG.10859.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3690bp|location=Sequence derived from alignment at sc0000077_pilon:288366..290999+ (Clytia hemisphaerica_ch_hm2_pilon)
atgggTACTGATTTTTCAAATGCActgaaaaaattcaaactggttttttt
AGGTGAACAGAGTGtTGGGAAGACATCACTCATCACACGATTTATGTATG
ATAGTTTTGACAGTACATACCAGgcAACCATAGGCATAGATTTCCTTTCA
AAGACCATGTACTTGGAGGATCGAACGGTTCGCTTGCAAATTTGGGACAC
AGCAGGGCAAGAGAGATTTAGAAGTTTGATTCCAAGTTATATCAGAGATT
CTTCTGCTGCAGTTGTTGTCTATGATATTTCAAGTACAAATTCCTTTGCT
CAAGTAGATCGTTGGATAGAAGATGTCCGTGCAGAGAGAGGCCAAGATGT
TGTTATAATGTTGGTTGGTAACAAAACAGATTTAACAGATAAAAGACGCG
TTTCCATGGAGCAAGGGGAAAGAAGAGCTAAAGAATTAGGAGTTTTATTT
ATTGAGAGTAGTGCAAAGACAGGTCATAACGTGAAACAGCTATTCAGACG
GGTTGCAGCAGCTTTACCAGGCATTGACAgtaaagaagatgaaaaaccAA
ACAACATTAACCAAGTCATTCACCCAAAGATTGATGATGAGCCGCAAAGC
TCATGTGGTTGCTGAatgggTACTGATTTTTCAAATGCActgaaaaaatt
caaactggtttttttAGGTGAACAGAGTGtTGGGAAGACATCACTCATCA
CACGATTTATGTATGATAGTTTTGACAGTACATACCAGgcAACCATAGGC
ATAGATTTCCTTTCAAAGACCATGTACTTGGAGGATCGAACGGTTCGCTT
GCAAATTTGGGACACAGCAGGGCAAGAGAGATTTAGAAGTTTGATTCCAA
GTTATATCAGAGATTCTTCTGCTGCAGTTGTTGTCTATGATATTTCAAGT
ACAAATTCCTTTGCTCAAGTAGATCGTTGGATAGAAGATGTCCGTGCAGA
GAGAGGCCAAGATGTTGTTATAATGTTGGTTGGTAACAAAACAGATTTAA
CAGATAAAAGACGCGTTTCCATGGAGCAAGGGGAAAGAAGAGCTAAAGAA
TTAGGAGTTTTATTTATTGAGAGTAGTGCAAAGACAGGTCATAACGTGAA
ACAGCTATTCAGACGGGTTGCAGCAGCTTTACCAGGCATTGACAgtaaag
aagatgaaaaaccAAACAACATTAACCAAGTCATTCACCCAAAGATTGAT
GATGAGCCGCAAAGCTCATGTGGTTGCTGAatgggTACTGATTTTTCAAA
TGCActgaaaaaattcaaactggtttttttAGGTGAACAGAGTGtTGGGA
AGACATCACTCATCACACGATTTATGTATGATAGTTTTGACAGTACATAC
CAGgcAACCATAGGCATAGATTTCCTTTCAAAGACCATGTACTTGGAGGA
TCGAACGGTTCGCTTGCAAATTTGGGACACAGCAGGGCAAGAGAGATTTA
GAAGTTTGATTCCAAGTTATATCAGAGATTCTTCTGCTGCAGTTGTTGTC
TATGATATTTCAAGTACAAATTCCTTTGCTCAAGTAGATCGTTGGATAGA
AGATGTCCGTGCAGAGAGAGGCCAAGATGTTGTTATAATGTTGGTTGGTA
ACAAAACAGATTTAACAGATAAAAGACGCGTTTCCATGGAGCAAGGGGAA
AGAAGAGCTAAAGAATTAGGAGTTTTATTTATTGAGAGTAGTGCAAAGAC
AGGTCATAACGTGAAACAGCTATTCAGACGGGTTGCAGCAGCTTTACCAG
GCATTGACAgtaaagaagatgaaaaaccAAACAACATTAACCAAGTCATT
CACCCAAAGATTGATGATGAGCCGCAAAGCTCATGTGGTTGCTGAatggg
TACTGATTTTTCAAATGCActgaaaaaattcaaactggtttttttAGGTG
AACAGAGTGtTGGGAAGACATCACTCATCACACGATTTATGTATGATAGT
TTTGACAGTACATACCAGgcAACCATAGGCATAGATTTCCTTTCAAAGAC
CATGTACTTGGAGGATCGAACGGTTCGCTTGCAAATTTGGGACACAGCAG
GGCAAGAGAGATTTAGAAGTTTGATTCCAAGTTATATCAGAGATTCTTCT
GCTGCAGTTGTTGTCTATGATATTTCAAGTACAAATTCCTTTGCTCAAGT
AGATCGTTGGATAGAAGATGTCCGTGCAGAGAGAGGCCAAGATGTTGTTA
TAATGTTGGTTGGTAACAAAACAGATTTAACAGATAAAAGACGCGTTTCC
ATGGAGCAAGGGGAAAGAAGAGCTAAAGAATTAGGAGTTTTATTTATTGA
GAGTAGTGCAAAGACAGGTCATAACGTGAAACAGCTATTCAGACGGGTTG
CAGCAGCTTTACCAGGCATTGACAgtaaagaagatgaaaaaccAAACAAC
ATTAACCAAGTCATTCACCCAAAGATTGATGATGAGCCGCAAAGCTCATG
TGGTTGCTGAatgggTACTGATTTTTCAAATGCActgaaaaaattcaaac
tggtttttttAGGTGAACAGAGTGtTGGGAAGACATCACTCATCACACGA
TTTATGTATGATAGTTTTGACAGTACATACCAGgcAACCATAGGCATAGA
TTTCCTTTCAAAGACCATGTACTTGGAGGATCGAACGGTTCGCTTGCAAA
TTTGGGACACAGCAGGGCAAGAGAGATTTAGAAGTTTGATTCCAAGTTAT
ATCAGAGATTCTTCTGCTGCAGTTGTTGTCTATGATATTTCAAGTACAAA
TTCCTTTGCTCAAGTAGATCGTTGGATAGAAGATGTCCGTGCAGAGAGAG
GCCAAGATGTTGTTATAATGTTGGTTGGTAACAAAACAGATTTAACAGAT
AAAAGACGCGTTTCCATGGAGCAAGGGGAAAGAAGAGCTAAAGAATTAGG
AGTTTTATTTATTGAGAGTAGTGCAAAGACAGGTCATAACGTGAAACAGC
TATTCAGACGGGTTGCAGCAGCTTTACCAGGCATTGACAgtaaagaagat
gaaaaaccAAACAACATTAACCAAGTCATTCACCCAAAGATTGATGATGA
GCCGCAAAGCTCATGTGGTTGCTGAatgggTACTGATTTTTCAAATGCAc
tgaaaaaattcaaactggtttttttAGGTGAACAGAGTGtTGGGAAGACA
TCACTCATCACACGATTTATGTATGATAGTTTTGACAGTACATACCAGgc
AACCATAGGCATAGATTTCCTTTCAAAGACCATGTACTTGGAGGATCGAA
CGGTTCGCTTGCAAATTTGGGACACAGCAGGGCAAGAGAGATTTAGAAGT
TTGATTCCAAGTTATATCAGAGATTCTTCTGCTGCAGTTGTTGTCTATGA
TATTTCAAGTACAAATTCCTTTGCTCAAGTAGATCGTTGGATAGAAGATG
TCCGTGCAGAGAGAGGCCAAGATGTTGTTATAATGTTGGTTGGTAACAAA
ACAGATTTAACAGATAAAAGACGCGTTTCCATGGAGCAAGGGGAAAGAAG
AGCTAAAGAATTAGGAGTTTTATTTATTGAGAGTAGTGCAAAGACAGGTC
ATAACGTGAAACAGCTATTCAGACGGGTTGCAGCAGCTTTACCAGGCATT
GACAgtaaagaagatgaaaaaccAAACAACATTAACCAAGTCATTCACCC
AAAGATTGATGATGAGCCGCAAAGCTCATGTGGTTGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000077_pilon | genome | sc0000077_pilon:288366..290999 + |
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