MSTRG.10740.1.p1 (mRNA) -

Overview
NameMSTRG.10740.1.p1
Unique NameMSTRG.10740.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000075_pilon:1434361..1438678+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10740.1.p1 ID=MSTRG.10740.1.p1|Name=MSTRG.10740.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4318bp|location=Sequence derived from alignment at sc0000075_pilon:1434361..1438678+ (Clytia hemisphaerica_ch_hm2_pilon)
gcttggtaaaactagtttcttaaaaaaaagcgtgtacaacATCAAgaata
tcttctttttttttcatttttagagggaataaaaaaaaacaccaaaaatg
atACTCAATTCTACTATTTAAGAATCCAAGAAAAGTGATATCCACTGACC
AAAATATAATGGCTCTACACTACAAGAAACCATTTTTACCATCAAGCATA
CACAAGCTGGTCGATAAAGATGAAATATTAGACACTTGTCAAGATACTTT
TCACTACGGATCTAATAACGGATTTGATAGCTCAGGATgctacttttcaa
tatatttccaACGAGGTCTTGGACTTAGCAGAGATTACGATGGATGTAAA
GTGATGTTGTATCGATTTGAAAACGACGAAGAAAAGATAGGTGTAAGTGT
AACGATTTCTTGGTTATTGCAGTGGAGTTTCCACAACtagaacacgcacg
gggaacattAATTTGTTCGTGTTAAGGAAACTTCGACTTATGGAGTATAA
TGTGagaccagaaaacttgttcgagttaaggagacctttgagttatagag
gttcgagataAAGAAACTCTGTTgtatcttcaaaaatatttgctctcatt
ttttgtttcaataagtTAGGAAAAAGAGGGAAACTTATATGAAACGAGGA
TAAATTAAACGTGAACAACACGTTTGGTTGAAAAAGATGAATTAGGATAA
AACATTGATGACGTAGGTGAAAAGAAGGTAAGTTGGGTAAAGAGAGAATT
CTAGCTTGTTATAACTTCTTTTAGACTTGTTTTATAAATCTGTACCGTTC
ACCGAAAGTCGTTCAGCCTTCAAATTTCAACCCGTTTGATCCACCCGAAA
ATGTAGAAGAAAGTGATTACGTCACTCAAAAGCTTGAATACGACGTTGTT
ACAATGCGTTGGTTTAACGTTGAAAAGACGTCCAAAGATGACGGGGACCA
CCAACTCACTGTTTACAGTAGCTGTTTGAGACCTCTGTACGAAAACGGTG
GCAAAAAGACGATCAATGTTGAGAAAGCTGATAATGGCAATGATGTACTT
GTGCTTTCGTATCCTAATATCCAAAAGTTTCTGGGAGCTGATATTAATAA
TGTAGGTAATGATTTCAATGATAAGGTTATATAAACTTTACTTTTCTGTT
TTAAAGTGTTCACTTTATACATTTTTCGTCCTTTGATTTGGAACGAATTG
AGTCTTCTTCATTCATTAGTATGGCagaaatgataatattttgaagtAGC
TTTATATTCTTCCtatttcgttcgttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgtttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgtttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtt
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttca
ttcaAACATATCAGCGTGAAATTGCTTCACTTTTTAACGCCACTACACGG
ATTTCGaattaagatttttttgtaACTACAACTTTCtgcatatttccata
tttttttttacagatgGTTTGTGGCAATTTTCTGGTACTGATGGTAACTC
CTGATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGATGACAAAGAA
ATCTTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACACTGTATACAA
CCCTTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACATGGAATGGC
AAAGGTTTTACGTAATGAGTAATTATGAGTTATATTGCTACGATTTTAAC
GGTGAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAGTAAGAATGAT
ttatcttattttcttgtgttttaAAGCGATTATATTTTAGGCCAGCAATT
GATGctttaaaacgttttttggcttttcgttaaaaaaactgtttgagAAC
CATTTCCACAAGGTTTAAGGGTCCAATGCCCAGATATATCTAATATAAAA
TACCCCTACATAGCGCTGTAGTCAAGCCACGGTAGTTGAAGTAAAATAAT
ACAACAGTAGAGTTGACCTCAGTAGTAGGCCACAGTTTGGTACCGCTAAA
TTGTTCAATCAGAACAAAACAACTGACGAGACGAGGATAGTTCTCATAAA
GATAGTTATTACTTTGCTTCGGTGAAGGAAAGAGTAGCTtcatctattgc
tttataaaagATATATGTGGTCGAATATCGCCAAAACAACATTAACCCTT
ATAACGGCTTACCGTCTTAGACGTTAAAAACACCCAAAATCTTAGACCAA
CAGAAAGTCATTAACCAGAGCGTGggggtcctgattacccatgctTCTTT
TTTACCTTAAAATGGCCAATGAAGGAGCCAATGACCAAACATGTGACGTC
ATTACCTCGAATCTTTTAACGCAACGCTTGAAAGgtgtttttttgaaact
ttttggaaaGGCCTGAAAATTTTAGATGTCTTTTATAGAACACTGAGCTA
GAGCTGATCATACACCGTCTTTTCTCAGTGGACCAAAGTTTGATAgcggc
aattttttcaatcaaGACCATTCATTCGCCTCATCGTTTCCCGTCATGTC
AGTTGTTTTGTTCTGATTGAACATATAACCCGAACCGAAATGCGGTCTAC
CACTGTAGTTTGCTTTACTCtttcattattttgcttcaattgcTTGAGCT
TGAGAAAAACAGAGTGGAACTATTGTTTTTAGTGTTTTCTCCGAGGTATA
AGAATGTCAGTTACTACTGGGAATGACAAATGTTATAGCAGTTTAAATGT
GATGCCCTTATGGAAGGGAAGAAAGCCACTGATCCAATTTTTGCATTAGG
TTGATAAAATGGTTATTGAGAAAACGATGCAAGTTTCGAACAGAGTCTTC
ATCACCGCCGTCCGCCATACCATCCCAGACCAATTTCCCATGGATACAAT
TAGACTGATTGAGATCAGCCGAAACGAAATAAAACTTGGCGATTGCATAA
AGCTTTCAAGCAGCAAGTATAACTTCATGCATAGATATATTTGGGTTCAG
AGATATCTCGGAAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATAC
CAATTGTTTCTTCAGCGTAAATGCGTATGATTTACAAACAGGTGGAGAAT
CAGTTGTATACAAATTTGAAGAACCATTTTATGGAGATTGTTATTTGAAT
TGGAATATGAGAGAAATGGCATTAGTTGGAGAATTGGATGATGAAGAGGG
AATCAAACGTCTTTGTGTTGAAAGAATTCCCTTCTTTTTGAGTTCGGATT
CGAATTGTGATTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAACAAT
TTCCATGAAGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATT
TCTTGACATTTTGTAGTAATTTGTGGATATCCCTATAGCTTTTCCTACAG
GAGGTTGGGATAAATCCTACCCGGTgctgcgattcacttggcaagtgatt
GTATGTATTACTACATACTGGTCAACACACAATGTAAAGAATCagtttta
tacaaatttgaaaaaccaTTTTATAGATACACGAAAATGGAAGATTAAAA
CACGTCTCCCGAAACTTTCGCTGATTATAATTTTGCATCATCTGAGGAAA
TTCACTCCAAACATTTTTGACGACGTCATGCATCTTCACACTTACAATTT
TTTGTACATGTCtttttttAGAGTATATATTTTCATTAAGATAATGATAT
TGATTTTATTCGCCTCGGGTGACTCAAAATATTGTCTACGTCCTGTGCAA
AAAACACATTCTGTCTTAAGCTACGGAAAAAGACGCACGACACGCTGATT
TTTGTCGGGCATAGACAGTGAgactttttaattgaaaaataatccTAGGG
GGAGACTAAACACTCAAGGtttttttagtcaccaaaccttttttaagttt
taaggctgaggttttcggctttttGGCATCTTGTACAGTATAATTTCGTT
TCTCGCTCTTCGTCATTTTTCGTCCATCCTTTAGAACCCATAATGCGGGG
TAAAAGTTTGTTGTAGGC

Coding sequence (CDS) from alignment at sc0000075_pilon:1434361..1438678+

>MSTRG.10740.1.p1 ID=MSTRG.10740.1.p1|Name=MSTRG.10740.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5616bp|location=Sequence derived from alignment at sc0000075_pilon:1434361..1438678+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTACACTACAAGAAACCATTTTTACCATCAAGCATACACAAGCT
GGTCGATAAAGATGAAATATTAGACACTTGTCAAGATACTTTTCACTACG
GATCTAATAACGGATTTGATAGCTCAGGATgctacttttcaatatatttc
caACGAGGTCTTGGACTTAGCAGAGATTACGATGGATGTAAAGTGATGTT
GTATCGATTTGAAAACGACGAAGAAAAGATAGGTACTTGTTTTATAAATC
TGTACCGTTCACCGAAAGTCGTTCAGCCTTCAAATTTCAACCCGTTTGAT
CCACCCGAAAATGTAGAAGAAAGTGATTACGTCACTCAAAAGCTTGAATA
CGACGTTGTTACAATGCGTTGGTTTAACGTTGAAAAGACGTCCAAAGATG
ACGGGGACCACCAACTCACTGTTTACAGTAGCTGTTTGAGACCTCTGTAC
GAAAACGGTGGCAAAAAGACGATCAATGTTGAGAAAGCTGATAATGGCAA
TGATGTACTTGTGCTTTCGTATCCTAATATCCAAAAGTTTCTGGGAGCTG
ATATTAATAATatgGTTTGTGGCAATTTTCTGGTACTGATGGTAACTCCT
GATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGATGACAAAGAAAT
CTTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACACTGTATACAACC
CTTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACATGGAATGGCAA
AGGTTTTACGTAATGAGTAATTATGAGTTATATTGCTACGATTTTAACGG
TGAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAGTTGATAAAATGG
TTATTGAGAAAACGATGCAAGTTTCGAACAGAGTCTTCATCACCGCCGTC
CGCCATACCATCCCAGACCAATTTCCCATGGATACAATTAGACTGATTGA
GATCAGCCGAAACGAAATAAAACTTGGCGATTGCATAAAGCTTTCAAGCA
GCAAGTATAACTTCATGCATAGATATATTTGGGTTCAGAGATATCTCGGA
AAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATACCAATTGTTTCTT
CAGCGTAAATGCGTATGATTTACAAACAGGTGGAGAATCAGTTGTATACA
AATTTGAAGAACCATTTTATGGAGATTGTTATTTGAATTGGAATATGAGA
GAAATGGCATTAGTTGGAGAATTGGATGATGAAGAGGGAATCAAACGTCT
TTGTGTTGAAAGAATTCCCTTCTTTTTGAGTTCGGATTCGAATTGTGATT
CTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAACAATTTCCATGAAGGT
TATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATTTCTTGACATTTT
GTAGATGGCTCTACACTACAAGAAACCATTTTTACCATCAAGCATACACA
AGCTGGTCGATAAAGATGAAATATTAGACACTTGTCAAGATACTTTTCAC
TACGGATCTAATAACGGATTTGATAGCTCAGGATgctacttttcaatata
tttccaACGAGGTCTTGGACTTAGCAGAGATTACGATGGATGTAAAGTGA
TGTTGTATCGATTTGAAAACGACGAAGAAAAGATAGGTACTTGTTTTATA
AATCTGTACCGTTCACCGAAAGTCGTTCAGCCTTCAAATTTCAACCCGTT
TGATCCACCCGAAAATGTAGAAGAAAGTGATTACGTCACTCAAAAGCTTG
AATACGACGTTGTTACAATGCGTTGGTTTAACGTTGAAAAGACGTCCAAA
GATGACGGGGACCACCAACTCACTGTTTACAGTAGCTGTTTGAGACCTCT
GTACGAAAACGGTGGCAAAAAGACGATCAATGTTGAGAAAGCTGATAATG
GCAATGATGTACTTGTGCTTTCGTATCCTAATATCCAAAAGTTTCTGGGA
GCTGATATTAATAATatgGTTTGTGGCAATTTTCTGGTACTGATGGTAAC
TCCTGATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGATGACAAAG
AAATCTTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACACTGTATAC
AACCCTTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACATGGAATG
GCAAAGGTTTTACGTAATGAGTAATTATGAGTTATATTGCTACGATTTTA
ACGGTGAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAGTTGATAAA
ATGGTTATTGAGAAAACGATGCAAGTTTCGAACAGAGTCTTCATCACCGC
CGTCCGCCATACCATCCCAGACCAATTTCCCATGGATACAATTAGACTGA
TTGAGATCAGCCGAAACGAAATAAAACTTGGCGATTGCATAAAGCTTTCA
AGCAGCAAGTATAACTTCATGCATAGATATATTTGGGTTCAGAGATATCT
CGGAAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATACCAATTGTT
TCTTCAGCGTAAATGCGTATGATTTACAAACAGGTGGAGAATCAGTTGTA
TACAAATTTGAAGAACCATTTTATGGAGATTGTTATTTGAATTGGAATAT
GAGAGAAATGGCATTAGTTGGAGAATTGGATGATGAAGAGGGAATCAAAC
GTCTTTGTGTTGAAAGAATTCCCTTCTTTTTGAGTTCGGATTCGAATTGT
GATTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAACAATTTCCATGA
AGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATTTCTTGACA
TTTTGTAGATGGCTCTACACTACAAGAAACCATTTTTACCATCAAGCATA
CACAAGCTGGTCGATAAAGATGAAATATTAGACACTTGTCAAGATACTTT
TCACTACGGATCTAATAACGGATTTGATAGCTCAGGATgctacttttcaa
tatatttccaACGAGGTCTTGGACTTAGCAGAGATTACGATGGATGTAAA
GTGATGTTGTATCGATTTGAAAACGACGAAGAAAAGATAGGTACTTGTTT
TATAAATCTGTACCGTTCACCGAAAGTCGTTCAGCCTTCAAATTTCAACC
CGTTTGATCCACCCGAAAATGTAGAAGAAAGTGATTACGTCACTCAAAAG
CTTGAATACGACGTTGTTACAATGCGTTGGTTTAACGTTGAAAAGACGTC
CAAAGATGACGGGGACCACCAACTCACTGTTTACAGTAGCTGTTTGAGAC
CTCTGTACGAAAACGGTGGCAAAAAGACGATCAATGTTGAGAAAGCTGAT
AATGGCAATGATGTACTTGTGCTTTCGTATCCTAATATCCAAAAGTTTCT
GGGAGCTGATATTAATAATatgGTTTGTGGCAATTTTCTGGTACTGATGG
TAACTCCTGATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGATGAC
AAAGAAATCTTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACACTGT
ATACAACCCTTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGACATGG
AATGGCAAAGGTTTTACGTAATGAGTAATTATGAGTTATATTGCTACGAT
TTTAACGGTGAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAGTTGA
TAAAATGGTTATTGAGAAAACGATGCAAGTTTCGAACAGAGTCTTCATCA
CCGCCGTCCGCCATACCATCCCAGACCAATTTCCCATGGATACAATTAGA
CTGATTGAGATCAGCCGAAACGAAATAAAACTTGGCGATTGCATAAAGCT
TTCAAGCAGCAAGTATAACTTCATGCATAGATATATTTGGGTTCAGAGAT
ATCTCGGAAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATACCAAT
TGTTTCTTCAGCGTAAATGCGTATGATTTACAAACAGGTGGAGAATCAGT
TGTATACAAATTTGAAGAACCATTTTATGGAGATTGTTATTTGAATTGGA
ATATGAGAGAAATGGCATTAGTTGGAGAATTGGATGATGAAGAGGGAATC
AAACGTCTTTGTGTTGAAAGAATTCCCTTCTTTTTGAGTTCGGATTCGAA
TTGTGATTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAACAATTTCC
ATGAAGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATTTCTT
GACATTTTGTAGATGGCTCTACACTACAAGAAACCATTTTTACCATCAAG
CATACACAAGCTGGTCGATAAAGATGAAATATTAGACACTTGTCAAGATA
CTTTTCACTACGGATCTAATAACGGATTTGATAGCTCAGGATgctacttt
tcaatatatttccaACGAGGTCTTGGACTTAGCAGAGATTACGATGGATG
TAAAGTGATGTTGTATCGATTTGAAAACGACGAAGAAAAGATAGGTACTT
GTTTTATAAATCTGTACCGTTCACCGAAAGTCGTTCAGCCTTCAAATTTC
AACCCGTTTGATCCACCCGAAAATGTAGAAGAAAGTGATTACGTCACTCA
AAAGCTTGAATACGACGTTGTTACAATGCGTTGGTTTAACGTTGAAAAGA
CGTCCAAAGATGACGGGGACCACCAACTCACTGTTTACAGTAGCTGTTTG
AGACCTCTGTACGAAAACGGTGGCAAAAAGACGATCAATGTTGAGAAAGC
TGATAATGGCAATGATGTACTTGTGCTTTCGTATCCTAATATCCAAAAGT
TTCTGGGAGCTGATATTAATAATatgGTTTGTGGCAATTTTCTGGTACTG
ATGGTAACTCCTGATGAAGCAAATTTCATTGTTGATCTGATCAAGTTCGA
TGACAAAGAAATCTTCCATTTCAAACGTCTAACAGCTCGAGGAGATTACA
CTGTATACAACCCTTTGTCTTTCGGCTTACCAAGCAAAGTATATCTGGAC
ATGGAATGGCAAAGGTTTTACGTAATGAGTAATTATGAGTTATATTGCTA
CGATTTTAACGGTGAAAAGATCTTCGACGGTAGCATTCGCAATTACGAAG
TTGATAAAATGGTTATTGAGAAAACGATGCAAGTTTCGAACAGAGTCTTC
ATCACCGCCGTCCGCCATACCATCCCAGACCAATTTCCCATGGATACAAT
TAGACTGATTGAGATCAGCCGAAACGAAATAAAACTTGGCGATTGCATAA
AGCTTTCAAGCAGCAAGTATAACTTCATGCATAGATATATTTGGGTTCAG
AGATATCTCGGAAAACAATATTTCTGTTGGCTTGAAGCTCGACCAAATAC
CAATTGTTTCTTCAGCGTAAATGCGTATGATTTACAAACAGGTGGAGAAT
CAGTTGTATACAAATTTGAAGAACCATTTTATGGAGATTGTTATTTGAAT
TGGAATATGAGAGAAATGGCATTAGTTGGAGAATTGGATGATGAAGAGGG
AATCAAACGTCTTTGTGTTGAAAGAATTCCCTTCTTTTTGAGTTCGGATT
CGAATTGTGATTCTCTCAAAGAACAAGCACGTTTTGTTTGCTTGAACAAT
TTCCATGAAGGTTATCTGTGTCAAAAACTTCCGAAAGATCTTTTACGATT
TCTTGACATTTTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10740MSTRG.10740Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10740.1.p1MSTRG.10740.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10740.1.p1.exon1MSTRG.10740.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10740.1.p1.exon2MSTRG.10740.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10740.1.p1.exon3MSTRG.10740.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10740.1.p1.exon4MSTRG.10740.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075_pilongenomesc0000075_pilon:1434361..1438678 +