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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000005_pilon:1772406..1774850- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1072.5.p2 ID=MSTRG.1072.5.p2|Name=MSTRG.1072.5.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2445bp|location=Sequence derived from alignment at sc0000005_pilon:1772406..1774850- (Clytia hemisphaerica_ch_hm2_pilon)
TTCACGAATGGTTAGGGAAAATTTCTAAAGATTTTGTTCAATCCAAGTAG
AAATACCTGACTCAAAATCATTTGGTATTGTTTCATTTCAGCGATAAAAA
AAGAACAGAAAAACAAGAAATTATTTAAAAAAACAGCTACAATGGCCAGC
ATCAATTGTGACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGT
TCCGTTCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAG
ACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCA
ATGGATTTCAATAACAACGAAAATAATCTTTTCGACGTTGATGTTTGTGC
TGAAAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCA
ACAAAATTGACTGTAAGTTTCGACTCTTTTCGCATTTTGTAAGTATCAAT
CAAAAGCCATACCGTATTGCTTTGAATAAACGCCCCGGGTGTGTTTAAAG
GTGGCGTTCATCGAAAATCTTTCCTTAAATTAGTAGCTACAAGATAGGCC
GATTCGCGAAATTCTATCCACTCGAAAAATTTTGATCTTCGATTCGCGAA
AAAAAGTCCACGTGAAAATTAAAGATCAGCGACTTTAAGGTAGTACCAAG
AAGGCTATTTTAGTTTAAAGCTATAGAAGGTGCCAAGAGATTCTCATATT
TTTATTTCTCATACAAATATGTTTTAATACTTTGGATTTTTTGTATTTTT
AGGTTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAGCTAA
AATCATTCAAATTACATTTAATCGAACATATGAAGACAGAATACGTATCA
AAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTGCTCA
AAAGTATGAATTGACTACATTAATTGAAACAATTAGATTAAGGTCTCTGC
GCATCTTAGATTTGGCTAGAAGCCAACGTACATTATACCTCGCTGGAGAA
AATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAACATGTCAATA
TCAACAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAATT
ATTCACAAATTTCAAAACCCCGACTTGGCTTCTAAAACAGATTTCTTAAC
CCACCAGATTCATGAGCACTTTATTGATTATGAGTCAATTTCCTACAAAA
AGGGTTTTCCAAATTGTGTCGTCTTGGACGTTGAGAACAAAGAAATTCAT
GTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATGTT
GAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTG
GCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACACACACTT
CAAGATATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAACTTATCG
TTTTTTGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAAATTACTT
CTATAGTGTCTTTTCTAATCATCAATGAATTTAGATTTTCAAAATTTCCT
TCTTGTTTTTTACTGTCCGAATTTTCCTACCCATTTGTAGATGACACTAA
TATTTGGGCTCTGGCACCTTTGTGTCAAGAATATCAAGTGGATTGGCTCT
CCAACAAAATAGAGTCCTTCATACGAAATTGTGCTACAAACAGAACAAAG
ACAATTCTCAACTATTTAGTGTTAGCTGAAGATATGCATTTTGGTATTGA
AGTAGAAAGGAGTTTGGTTTCTAAACTCTTAAGAGGGTTCCAAAATATCA
GTATGTGCTTGGAATTTCTCCTACTCAGCCGTCGAATGCAAGTTTGGATT
GCAAGAAGAAAATTAGCTGATTCTTTGAAGAAGTTTCTGATTGATCCGTA
CTTTGATACTCTTCCCAGGTATGGCAAGCAAACAACCCGAGAGAAAAAAG
AGGCTGGGATAAAGAAATATAAAGCAGTTGATGCTGACGTTGTTTCCATA
TTTCATGATCTAGATCAACCCAAAATGGAGCTTATAAATGCATAATGGCA
TACATAATCACAATTTTTTGTTTGTGCCAGATTCTATTATATTAACTAAA
AGTTCTGTTTTATTTACCATGCATTGGGCTTTTCCAGAAAAAAACCGCAC
ACCCCCTGTTGAGGAGGTCTATCCCTTTATGGCTGGAAATGCTGTAAACC
CCCTGGAATTCCAGGAAATTTTAGATTTAAACCCCTCTGAAATTCTTAAA
TTTAGTAGGATTTAAAAAGCTACCACATGGAATTCCAGTTATTTTTGACA
GATTTTTGTATCTCCCTATGGAATTCCACCACATATATCAAACCTTACCC
CCTTGGAACGAAAGTGGACCTCCTCAACAGGGGTTTTTTTTCTGGAAAAA
CCCATTCTTAAAATGATTCTGTCCCTTTTTTTGAAAATACTTTTT Coding sequence (CDS) from alignment at sc0000005_pilon:1772406..1774850- >MSTRG.1072.5.p2 ID=MSTRG.1072.5.p2|Name=MSTRG.1072.5.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1278bp|location=Sequence derived from alignment at sc0000005_pilon:1772406..1774850- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAGCT
AAAATCATTCAAATTACATTTAATCGAACATATGAAGACAGAATACGTAT
CAAAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTGCT
CAAAAATGGCCAGCATCAATTGTGACAACATCGTTCCGAACGAAGAGCGA
AATGGAAAATTAGTTCCGTTCGATTTCCATGAAAATGAATGTGACGTCAT
TATTAAGACAAAAGACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAA
TGGTATCTAGTCCAATGGATTTCAATAACAACGAAAATAATCTTTTCGAC
GTTGATGTTTGTGCTGAAAGTGTAACCAAAGCGTTGTCATTTTATCACCC
TAAGGATTGGACCAACAAAATTGACTATGAGTTCGGAGTTGGATGATTTA
CTCTTAGTTACAAATACGCTTAAGCTAAAATCATTCAAATTACATTTAAT
CGAACATATGAAGACAGAATACGTATCAAAGTCAAAGCAATTTGATGAGA
ATTTACTGCAAGTTTTTCATGCTGCTCAAAAATGGCCAGCATCAATTGTG
ACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGTTCCGTTCGAT
TTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAAGAAGT
TCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGGATTTCA
ATAACAACGAAAATAATCTTTTCGACGTTGATGTTTGTGCTGAAAGTGTA
ACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACAAAATTGA
CTATGAGTTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAG
CTAAAATCATTCAAATTACATTTAATCGAACATATGAAGACAGAATACGT
ATCAAAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTG
CTCAAAAATGGCCAGCATCAATTGTGACAACATCGTTCCGAACGAAGAGC
GAAATGGAAAATTAGTTCCGTTCGATTTCCATGAAAATGAATGTGACGTC
ATTATTAAGACAAAAGACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGA
AATGGTATCTAGTCCAATGGATTTCAATAACAACGAAAATAATCTTTTCG
ACGTTGATGTTTGTGCTGAAAGTGTAACCAAAGCGTTGTCATTTTATCAC
CCTAAGGATTGGACCAACAAAATTGACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005_pilon | genome | sc0000005_pilon:1772406..1774850 - |
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