MSTRG.1064.4.p1 (mRNA) -

Overview
NameMSTRG.1064.4.p1
Unique NameMSTRG.1064.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000005_pilon:1661875..1663488-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1064.4.p1 ID=MSTRG.1064.4.p1|Name=MSTRG.1064.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1614bp|location=Sequence derived from alignment at sc0000005_pilon:1661875..1663488- (Clytia hemisphaerica_ch_hm2_pilon)
AAGGACCAGCAGAGTGAAACGTGGGAACCAAGCTTCAAAAGAAAGGGTTC
AAAATTGCAACCTACACAATTCCAAGTTACAAGAAAAAAGAAGAAGAAAT
TTTTTTTTTCTCCATATATAAACGAATTAAAATCGATAATTATTGATTGG
AAAATCGTGTAATTTGGTCAATTGGTTGACCAAATCAAAATGATGGTAAG
TTTAGTTTTCTTTTGGACCAAACTTTTGTAGGGTGTAGACGAAGCTCTTA
AGATTTTATGATGGAATATGGTTTTTGACGAAGAAGAGGTGAACTTAATC
TTGAACTTATCTTGAACTTAAGTTTGAGTTGGCGATTGCTCATTTGATTT
TTGTCCTGAAGATAATTATATTTCTATCTTATAAACTTTATAGGAATTTG
GAAAAACACAAATCGTCAATATAGTCATACTGTGTATGTGTATTCGAATA
ACGAGTTCTAAACCAACACAATCACCACACCAACAACAACCGAAGAAGAA
AATTAATCTCTGGGATGGAAATCCTTGCATGGTGAACAGTACAAGCTCCG
GTGGTGATGGCACAAGGAATTTGGTTACTTGTGTCAAGAAAGAACTAGCA
TGGGGCCTTGACAAGTACACACCAAATTTGATGTGTGTGACAGTTCAAGC
AAAACAAAACAACGCATTGAAACCATACTACGATAAGAAGTAAGCATACA
TTTCATAAGTTTTTTTTCGTTTGGTCAAATTCTGAGGTATAGGACTCTCA
ACTCCATGTTGGCCCATGTTGAAACCGCAATACTGGGATTGCCAGGGAAA
TGTTTTAACGATCGAGATACCTGGAAAATTTTCCGAAGAATAGAAAATGA
ACATCTTTTGAGAATTATTCAAAGCCATTCACCTGGAAGGAGCTTGAAAA
TGTTTTAGCTTATTTCAAAAACCTATTTGATTATATAAATTTAGCACGCC
CTTTCTTCATTATTAAAAGTCTAAGCAAAGTGAATATGATGTTATACATT
TCAATTAAAGTTACGCCTTATATTCAAATTTCAGATGTGAAGTCAAGTTT
GTACTAAACAATGATAAGAATCATCCTTGGGTCAAGAGCGGAATCTTCAA
AGCCGATACGCCTTCTACAGAGTACGCGCATTCGCCCTGCGGCGCACCCA
AGACTGAAACAGACGCTAATGGTCGAACCCACAAATATTGCGATGCCAAC
GTATGGAACAGTTTAGCTCCCGATTTAATCAAAGAGATGACACTAGCTGG
ACTTCGATGTGAGACTTTGACCAAAATGAAGATTGTTAACAACAAGCCGG
TCAGGTTTCGTGTTGGATGTGAACTTCGACGTATGCCTTTAACAAAGCGA
ATGATTTCTGCAACCAAATGAAGATTCTGTATTCCTTTATTGTTGGGGAG
GGGCAGACTGTTGTTGAAATAAATGGGAGGATAGATCAAATCAACCCAGA
GAGAGGTAGTGGTGTTAGTGCACGGTGCTTAAGACAGTAGAGCATTTGCT
AGAAGCAGAGAGGGAAGATAACTATTCTAAGCAGTAGAGAGGTGCCAATG
ACTTTTCGAAGAAAACTATATTTATTTGACAAATAGGAGTTTTTTCTTAA
TACTGGTATCAGTC

Coding sequence (CDS) from alignment at sc0000005_pilon:1661875..1663488-

>MSTRG.1064.4.p1 ID=MSTRG.1064.4.p1|Name=MSTRG.1064.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1917bp|location=Sequence derived from alignment at sc0000005_pilon:1661875..1663488- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGAAGTCAAGTTTGTACTAAACAATGATAAGAATCATCCTTGGGTCA
AGAGCGGAATCTTCAAAGCCGATACGCCTTCTACAGAGTACGCGCATTCG
CCCTGCGGCGCACCCAAGACTGAAACAGACGCTAATGGTCGAACCCACAA
ATATTGCGATGCCAACGTATGGAACAGTTTAGCTCCCGATTTAATCAAAG
AGATGACACTAGCTGGACTTCGATGTGAGACTTTGACCAAAATGAAGATT
GTTAACAACAAGCCGGTCAGGTTTCGTGTTGGATGTGAACTTCGACGTAT
GCCTTTAACAAAGCGAATGATTTCTGCAACCAAATGAGAATTTGGAAAAA
CACAAATCGTCAATATAGTCATACTGTGTATGTGTATTCGAATAACGAGT
TCTAAACCAACACAATCACCACACCAACAACAACCGAAGAAGAAAATTAA
TCTCTGGGATGGAAATCCTTGCATGGTGAACAGTACAAGCTCCGGTGGTG
ATGGCACAAGGAATTTGGTTACTTGTGTCAAGAAAGAACTAGCATGGGGC
CTTGACAAGTACACACCAAATTTGATGTGTGTGACAGTTCAAGCAAAACA
AAACAACGCATTGAAACCATACTACGATAAGAAATGATGATGTGAAGTCA
AGTTTGTACTAAACAATGATAAGAATCATCCTTGGGTCAAGAGCGGAATC
TTCAAAGCCGATACGCCTTCTACAGAGTACGCGCATTCGCCCTGCGGCGC
ACCCAAGACTGAAACAGACGCTAATGGTCGAACCCACAAATATTGCGATG
CCAACGTATGGAACAGTTTAGCTCCCGATTTAATCAAAGAGATGACACTA
GCTGGACTTCGATGTGAGACTTTGACCAAAATGAAGATTGTTAACAACAA
GCCGGTCAGGTTTCGTGTTGGATGTGAACTTCGACGTATGCCTTTAACAA
AGCGAATGATTTCTGCAACCAAATGAGAATTTGGAAAAACACAAATCGTC
AATATAGTCATACTGTGTATGTGTATTCGAATAACGAGTTCTAAACCAAC
ACAATCACCACACCAACAACAACCGAAGAAGAAAATTAATCTCTGGGATG
GAAATCCTTGCATGGTGAACAGTACAAGCTCCGGTGGTGATGGCACAAGG
AATTTGGTTACTTGTGTCAAGAAAGAACTAGCATGGGGCCTTGACAAGTA
CACACCAAATTTGATGTGTGTGACAGTTCAAGCAAAACAAAACAACGCAT
TGAAACCATACTACGATAAGAAATGATGATGTGAAGTCAAGTTTGTACTA
AACAATGATAAGAATCATCCTTGGGTCAAGAGCGGAATCTTCAAAGCCGA
TACGCCTTCTACAGAGTACGCGCATTCGCCCTGCGGCGCACCCAAGACTG
AAACAGACGCTAATGGTCGAACCCACAAATATTGCGATGCCAACGTATGG
AACAGTTTAGCTCCCGATTTAATCAAAGAGATGACACTAGCTGGACTTCG
ATGTGAGACTTTGACCAAAATGAAGATTGTTAACAACAAGCCGGTCAGGT
TTCGTGTTGGATGTGAACTTCGACGTATGCCTTTAACAAAGCGAATGATT
TCTGCAACCAAATGAGAATTTGGAAAAACACAAATCGTCAATATAGTCAT
ACTGTGTATGTGTATTCGAATAACGAGTTCTAAACCAACACAATCACCAC
ACCAACAACAACCGAAGAAGAAAATTAATCTCTGGGATGGAAATCCTTGC
ATGGTGAACAGTACAAGCTCCGGTGGTGATGGCACAAGGAATTTGGTTAC
TTGTGTCAAGAAAGAACTAGCATGGGGCCTTGACAAGTACACACCAAATT
TGATGTGTGTGACAGTTCAAGCAAAACAAAACAACGCATTGAAACCATAC
TACGATAAGAAATGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1064MSTRG.1064Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1064.4.p1MSTRG.1064.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1064.4.p1.exon3MSTRG.1064.4.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1064.4.p1.exon2MSTRG.1064.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1064.4.p1.exon1MSTRG.1064.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005_pilongenomesc0000005_pilon:1661875..1663488 -