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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:1166024..1168709- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10550.1.p1 ID=MSTRG.10550.1.p1|Name=MSTRG.10550.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2686bp|location=Sequence derived from alignment at sc0000073_pilon:1166024..1168709- (Clytia hemisphaerica_ch_hm2_pilon)
TCGAATTAGAGGTTGGGAGCGAATACAGGGCTTCGCCACCATTCCTTGAA
ACATTTCACCATGCGTTGGTTTTCCAACAGAAACAAAATCCACCCAACGG
AGGGTGATGGTGAAAATGAAGAATTTTTCGAAAATGAAAGCAAAAATAAT
GAAACCTTCAAAATTGCTCAAGGTAGGTTGAATCTTGGCGGGACGAGAAA
TAAAAATTATGCCCATCTTTTAGCAGTGTATGCTCTTTAAGCTTGTTTTC
ACCAAGCATACAATGTATGTCATTACCATACATTTAAAATTTCGTTTTCC
TTTAGATTTCAAGTTATTTTCGTCGATGGTTCATTTGGCGATCGGTTTTG
CAGATGTTTGTTTCTGGTGGTCTGTGTGGCTGATGTCCGATTCATTGTAC
CCTATCAATGGTATGGCTTACGATGGTTACGCCTTCTTACGAGGATATTG
TCTCATCTTAACGGCCAATTTTGTCTACTTTACAATCCGTTGGCTGTTTT
ACGAAACATTTACCGAAAATTATGATAATTTTTCCAGTATAAGTTACCCG
GCAATATTTTTGAAATATGCAAAATTCATCAAGGAGAAAAGTTCCAAATT
CAAAGTTCTGAAATTGATGCTTCCGCTTTGTGTTTATGGCTTAGTGGTGG
GTTTCATTCAAATCTGGCGTGGATTGTTCGATATCTTCGGCTACTTATTG
AAACTGTTGGAAAGGAATTATCAAATCAATCAAGTGTGGAGTGCATTGGC
TTTGCAATTTGTTGTGGCCGTATCGCTTGCTTTCACTCGCAAAAATAATG
CAGTGAATTTGTGCCCAACTCACGAAGATTACAAAAAAGACGAGTTACAA
TACTTGGACACACTTTTCAATATGCAAAACTTAACATTCATGAAATTGAG
TCATAGAAAGAAGGAACAGAAATGGTTCGCGTTGGCAGAACGAAAATTCA
ACCTCCCTGCTCTTTTCAAAAGAGAAAAAAGTTTAGTCAGTGAATCGATC
GTCGACACAGATTTTGACATCGTGAAATATTTCACCAATAAATTGATCAG
CAGCCTTTCCACCACTCAGCGCGAACCAATCAATGGCTTGTGGCAAATCA
TCGTGGAGACAGAGCCTAAAGAGAGAGAATGTGTGGAAGAATGTCATTCT
TTGGAGAAAGTGAACCTTGCTTTCACTGAAAATGAAAACGTTTTTCAATC
CACTACGACTACCTTAACCTCACTTCCCACTCCTTTAAGCACTCCACCAG
CTACACCCACGCCACCCTCACGCCCTATTCCCGTCATCCAAATAAATGGG
GAAGTAGGGATTGAAAGAGAGAAAACGGTGGTATGGGAGAATCGAAAAAG
CAAAGTTACTGTCAGTTTTGAATCCGAGGAAACTTCGACAATAGGCGCGG
ACAGTGAGGAGGATATCAAGTCAATAGCGGTCGAACAAAACGAACAACAA
TATTTGAATCTTGATCAATTAAATGAAGAACAGAAAGAGTACACAAAAAT
CTTGACCAACATTTCGGAGAAACGGTTTGAAAAGAGAGCAAAATCAATCT
GCATCAATATCACTCCTGACATCAAACTTCCCAAACAATGTGAAGAAAAG
GAGACAAAGGAGGAAATGGTGGATTCGTTTGATTGGAGACATTCAGTGAT
CGAAGTGTTCGGATATCTGTATGCTATCCATCATCGACAAATCTTCCTTC
ATATTTTCGGTGGAATGTTCTGGAGCACAACATGGAAATTGTTCGATTTT
GCAACAGAATCCATTTTCACTAAAACCGCAAGTGATATTCCAGGACTTGT
TTTGATTGCAATTTTTTGTCATTCTATGAACCATTTGGTTTTGTTTCGAT
TCAAAGAGATGGCGCCAAGTATCTACTTGAAGACATTCTACAATTTTTTG
TGTGGGGTATTTACTGTGTGTTTGTGGGCATGCGCGTGGTACGTCTTGGA
TATCACCACCACTTTTACAGGTACGTTAGAGACTGTGAAGCCAGCAGAGT
GATGGTATTATTTCTAGAACACCATTCATTACATATACGATAATCTTTCT
AATTAAGTTTGATTTCCAAAGGGCCAGGTCTAAAGTGACATTAATTAAAA
TCAAATTTTTTCATCATTTTAGATCAGAAACGATTGTTGTGGGTGACTGC
CAACTTGGTTGCTTTCTTCGTGCTAGCTTTTTTCAATATATCTATAAACA
TTGCTTTGTGAAATCGGCTGCCGTGAAAATGGACAAATCTAAATGTAATT
TTTACCTATTGTTAAATACATCGAGACTTGAAAGCCATTTGGAATCAAGT
CCATTGTTATCGTTTAATTCCCAAGGCAACCGCATCTGATGATCATATCA
TCATATCCCCTGCAAGCGGATGGCGTCTGGAACAATGTGGACATACTTTG
ACGTAGCCAACATATCTTTTACATTGAAACGAATTTACAATAGCTAAATC
AGAAGTTTCGAAATGGGCGATGAGATCTATATCACAGGGAATTCTTGATT
AGGTTGTTTTAGATATCTTTATCGTTGTTTGTAAATATGAGAAGAAATGA
ATGAATTTTCATACCTACCCATCAAAGTATTTTCATTCCAAAAAGAGAGA
GTAGGTATATTAATAGAACTAATTCAATACTACACTTGAACCAGATTTCC
ATATGAGATAGGGAAATTCATCTCTCAATGTTTTGC Coding sequence (CDS) from alignment at sc0000073_pilon:1166024..1168709- >MSTRG.10550.1.p1 ID=MSTRG.10550.1.p1|Name=MSTRG.10550.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5967bp|location=Sequence derived from alignment at sc0000073_pilon:1166024..1168709- (Clytia hemisphaerica_ch_hm2_pilon)
AAACGATTGTTGTGGGTGACTGCCAACTTGGTTGCTTTCTTCGTGCTAGC
TTTTTTCAATATATCTATAAACATTGCTTTGTGAAATCGGCTGCCGTGAA
AATGGACAAATCTAAATGTAATTTTTACCTATTGTTAAATACATCGAGAC
TTGAAAGCCATTTGGAATCAAGTCCATTGTTATCGTTTAATTCCCAAGGC
AACCGCATCTGAATTTCAAGTTATTTTCGTCGATGGTTCATTTGGCGATC
GGTTTTGCAGATGTTTGTTTCTGGTGGTCTGTGTGGCTGATGTCCGATTC
ATTGTACCCTATCAATGGTATGGCTTACGATGGTTACGCCTTCTTACGAG
GATATTGTCTCATCTTAACGGCCAATTTTGTCTACTTTACAATCCGTTGG
CTGTTTTACGAAACATTTACCGAAAATTATGATAATTTTTCCAGTATAAG
TTACCCGGCAATATTTTTGAAATATGCAAAATTCATCAAGGAGAAAAGTT
CCAAATTCAAAGTTCTGAAATTGATGCTTCCGCTTTGTGTTTATGGCTTA
GTGGTGGGTTTCATTCAAATCTGGCGTGGATTGTTCGATATCTTCGGCTA
CTTATTGAAACTGTTGGAAAGGAATTATCAAATCAATCAAGTGTGGAGTG
CATTGGCTTTGCAATTTGTTGTGGCCGTATCGCTTGCTTTCACTCGCAAA
AATAATGCAGTGAATTTGTGCCCAACTCACGAAGATTACAAAAAAGACGA
GTTACAATACTTGGACACACTTTTCAATATGCAAAACTTAACATTCATGA
AATTGAGTCATAGAAAGAAGGAACAGAAATGGTTCGCGTTGGCAGAACGA
AAATTCAACCTCCCTGCTCTTTTCAAAAGAGAAAAAAGTTTAGTCAGTGA
ATCGATCGTCGACACAGATTTTGACATCGTGAAATATTTCACCAATAAAT
TGATCAGCAGCCTTTCCACCACTCAGCGCGAACCAATCAATGGCTTGTGG
CAAATCATCGTGGAGACAGAGCCTAAAGAGAGAGAATGTGTGGAAGAATG
TCATTCTTTGGAGAAAGTGAACCTTGCTTTCACTGAAAATGAAAACGTTT
TTCAATCCACTACGACTACCTTAACCTCACTTCCCACTCCTTTAAGCACT
CCACCAGCTACACCCACGCCACCCTCACGCCCTATTCCCGTCATCCAAAT
AAATGGGGAAGTAGGGATTGAAAGAGAGAAAACGGTGGTATGGGAGAATC
GAAAAAGCAAAGTTACTGTCAGTTTTGAATCCGAGGAAACTTCGACAATA
GGCGCGGACAGTGAGGAGGATATCAAGTCAATAGCGGTCGAACAAAACGA
ACAACAATATTTGAATCTTGATCAATTAAATGAAGAACAGAAAGAGTACA
CAAAAATCTTGACCAACATTTCGGAGAAACGGTTTGAAAAGAGAGCAAAA
TCAATCTGCATCAATATCACTCCTGACATCAAACTTCCCAAACAATGTGA
AGAAAAGGAGACAAAGGAGGAAATGGTGGATTCGTTTGATTGGAGACATT
CAGTGATCGAAGTGTTCGGATATCTGTATGCTATCCATCATCGACAAATC
TTCCTTCATATTTTCGGTGGAATGTTCTGGAGCACAACATGGAAATTGTT
CGATTTTGCAACAGAATCCATTTTCACTAAAACCGCAAGTGATATTCCAG
GACTTGTTTTGATTGCAATTTTTTGTCATTCTATGAACCATTTGGTTTTG
TTTCGATTCAAAGAGATGGCGCCAAGTATCTACTTGAAGACATTCTACAA
TTTTTTGTGTGGGGTATTTACTGTGTGTTTGTGGGCATGCGCGTGGTACG
TCTTGGATATCACCACCACTTTTACAGATGCGTTGGTTTTCCAACAGAAA
CAAAATCCACCCAACGGAGGGTGATGGTGAAAATGAAGAATTTTTCGAAA
ATGAAAGCAAAAATAATGAAACCTTCAAAATTGCTCAAGAAACGATTGTT
GTGGGTGACTGCCAACTTGGTTGCTTTCTTCGTGCTAGCTTTTTTCAATA
TATCTATAAACATTGCTTTGTGAAATCGGCTGCCGTGAAAATGGACAAAT
CTAAATGTAATTTTTACCTATTGTTAAATACATCGAGACTTGAAAGCCAT
TTGGAATCAAGTCCATTGTTATCGTTTAATTCCCAAGGCAACCGCATCTG
AATTTCAAGTTATTTTCGTCGATGGTTCATTTGGCGATCGGTTTTGCAGA
TGTTTGTTTCTGGTGGTCTGTGTGGCTGATGTCCGATTCATTGTACCCTA
TCAATGGTATGGCTTACGATGGTTACGCCTTCTTACGAGGATATTGTCTC
ATCTTAACGGCCAATTTTGTCTACTTTACAATCCGTTGGCTGTTTTACGA
AACATTTACCGAAAATTATGATAATTTTTCCAGTATAAGTTACCCGGCAA
TATTTTTGAAATATGCAAAATTCATCAAGGAGAAAAGTTCCAAATTCAAA
GTTCTGAAATTGATGCTTCCGCTTTGTGTTTATGGCTTAGTGGTGGGTTT
CATTCAAATCTGGCGTGGATTGTTCGATATCTTCGGCTACTTATTGAAAC
TGTTGGAAAGGAATTATCAAATCAATCAAGTGTGGAGTGCATTGGCTTTG
CAATTTGTTGTGGCCGTATCGCTTGCTTTCACTCGCAAAAATAATGCAGT
GAATTTGTGCCCAACTCACGAAGATTACAAAAAAGACGAGTTACAATACT
TGGACACACTTTTCAATATGCAAAACTTAACATTCATGAAATTGAGTCAT
AGAAAGAAGGAACAGAAATGGTTCGCGTTGGCAGAACGAAAATTCAACCT
CCCTGCTCTTTTCAAAAGAGAAAAAAGTTTAGTCAGTGAATCGATCGTCG
ACACAGATTTTGACATCGTGAAATATTTCACCAATAAATTGATCAGCAGC
CTTTCCACCACTCAGCGCGAACCAATCAATGGCTTGTGGCAAATCATCGT
GGAGACAGAGCCTAAAGAGAGAGAATGTGTGGAAGAATGTCATTCTTTGG
AGAAAGTGAACCTTGCTTTCACTGAAAATGAAAACGTTTTTCAATCCACT
ACGACTACCTTAACCTCACTTCCCACTCCTTTAAGCACTCCACCAGCTAC
ACCCACGCCACCCTCACGCCCTATTCCCGTCATCCAAATAAATGGGGAAG
TAGGGATTGAAAGAGAGAAAACGGTGGTATGGGAGAATCGAAAAAGCAAA
GTTACTGTCAGTTTTGAATCCGAGGAAACTTCGACAATAGGCGCGGACAG
TGAGGAGGATATCAAGTCAATAGCGGTCGAACAAAACGAACAACAATATT
TGAATCTTGATCAATTAAATGAAGAACAGAAAGAGTACACAAAAATCTTG
ACCAACATTTCGGAGAAACGGTTTGAAAAGAGAGCAAAATCAATCTGCAT
CAATATCACTCCTGACATCAAACTTCCCAAACAATGTGAAGAAAAGGAGA
CAAAGGAGGAAATGGTGGATTCGTTTGATTGGAGACATTCAGTGATCGAA
GTGTTCGGATATCTGTATGCTATCCATCATCGACAAATCTTCCTTCATAT
TTTCGGTGGAATGTTCTGGAGCACAACATGGAAATTGTTCGATTTTGCAA
CAGAATCCATTTTCACTAAAACCGCAAGTGATATTCCAGGACTTGTTTTG
ATTGCAATTTTTTGTCATTCTATGAACCATTTGGTTTTGTTTCGATTCAA
AGAGATGGCGCCAAGTATCTACTTGAAGACATTCTACAATTTTTTGTGTG
GGGTATTTACTGTGTGTTTGTGGGCATGCGCGTGGTACGTCTTGGATATC
ACCACCACTTTTACAGATGCGTTGGTTTTCCAACAGAAACAAAATCCACC
CAACGGAGGGTGATGGTGAAAATGAAGAATTTTTCGAAAATGAAAGCAAA
AATAATGAAACCTTCAAAATTGCTCAAGAAACGATTGTTGTGGGTGACTG
CCAACTTGGTTGCTTTCTTCGTGCTAGCTTTTTTCAATATATCTATAAAC
ATTGCTTTGTGAAATCGGCTGCCGTGAAAATGGACAAATCTAAATGTAAT
TTTTACCTATTGTTAAATACATCGAGACTTGAAAGCCATTTGGAATCAAG
TCCATTGTTATCGTTTAATTCCCAAGGCAACCGCATCTGAATTTCAAGTT
ATTTTCGTCGATGGTTCATTTGGCGATCGGTTTTGCAGATGTTTGTTTCT
GGTGGTCTGTGTGGCTGATGTCCGATTCATTGTACCCTATCAATGGTATG
GCTTACGATGGTTACGCCTTCTTACGAGGATATTGTCTCATCTTAACGGC
CAATTTTGTCTACTTTACAATCCGTTGGCTGTTTTACGAAACATTTACCG
AAAATTATGATAATTTTTCCAGTATAAGTTACCCGGCAATATTTTTGAAA
TATGCAAAATTCATCAAGGAGAAAAGTTCCAAATTCAAAGTTCTGAAATT
GATGCTTCCGCTTTGTGTTTATGGCTTAGTGGTGGGTTTCATTCAAATCT
GGCGTGGATTGTTCGATATCTTCGGCTACTTATTGAAACTGTTGGAAAGG
AATTATCAAATCAATCAAGTGTGGAGTGCATTGGCTTTGCAATTTGTTGT
GGCCGTATCGCTTGCTTTCACTCGCAAAAATAATGCAGTGAATTTGTGCC
CAACTCACGAAGATTACAAAAAAGACGAGTTACAATACTTGGACACACTT
TTCAATATGCAAAACTTAACATTCATGAAATTGAGTCATAGAAAGAAGGA
ACAGAAATGGTTCGCGTTGGCAGAACGAAAATTCAACCTCCCTGCTCTTT
TCAAAAGAGAAAAAAGTTTAGTCAGTGAATCGATCGTCGACACAGATTTT
GACATCGTGAAATATTTCACCAATAAATTGATCAGCAGCCTTTCCACCAC
TCAGCGCGAACCAATCAATGGCTTGTGGCAAATCATCGTGGAGACAGAGC
CTAAAGAGAGAGAATGTGTGGAAGAATGTCATTCTTTGGAGAAAGTGAAC
CTTGCTTTCACTGAAAATGAAAACGTTTTTCAATCCACTACGACTACCTT
AACCTCACTTCCCACTCCTTTAAGCACTCCACCAGCTACACCCACGCCAC
CCTCACGCCCTATTCCCGTCATCCAAATAAATGGGGAAGTAGGGATTGAA
AGAGAGAAAACGGTGGTATGGGAGAATCGAAAAAGCAAAGTTACTGTCAG
TTTTGAATCCGAGGAAACTTCGACAATAGGCGCGGACAGTGAGGAGGATA
TCAAGTCAATAGCGGTCGAACAAAACGAACAACAATATTTGAATCTTGAT
CAATTAAATGAAGAACAGAAAGAGTACACAAAAATCTTGACCAACATTTC
GGAGAAACGGTTTGAAAAGAGAGCAAAATCAATCTGCATCAATATCACTC
CTGACATCAAACTTCCCAAACAATGTGAAGAAAAGGAGACAAAGGAGGAA
ATGGTGGATTCGTTTGATTGGAGACATTCAGTGATCGAAGTGTTCGGATA
TCTGTATGCTATCCATCATCGACAAATCTTCCTTCATATTTTCGGTGGAA
TGTTCTGGAGCACAACATGGAAATTGTTCGATTTTGCAACAGAATCCATT
TTCACTAAAACCGCAAGTGATATTCCAGGACTTGTTTTGATTGCAATTTT
TTGTCATTCTATGAACCATTTGGTTTTGTTTCGATTCAAAGAGATGGCGC
CAAGTATCTACTTGAAGACATTCTACAATTTTTTGTGTGGGGTATTTACT
GTGTGTTTGTGGGCATGCGCGTGGTACGTCTTGGATATCACCACCACTTT
TACAGATGCGTTGGTTTTCCAACAGAAACAAAATCCACCCAACGGAGGGT
GATGGTGAAAATGAAGAATTTTTCGAAAATGAAAGCAAAAATAATGAAAC
CTTCAAAATTGCTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:1166024..1168709 - |
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