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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000073_pilon:1120773..1122706- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10544.1.p1 ID=MSTRG.10544.1.p1|Name=MSTRG.10544.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1934bp|location=Sequence derived from alignment at sc0000073_pilon:1120773..1122706- (Clytia hemisphaerica_ch_hm2_pilon)
TAAATTTCTAGTTTTCACTTTTTTTTATCAAATTTATCTGGCCCAGCAAG
AAATGTTTTCAAGTTGAACAAAACTATCAAAAATACAAGTATTGCAGTTT
TCTAGATTCTTGGGAACATGCTGTATTCAAGATGCTATGAAGGGAAGAGC
TAAAAATTTAAGCTATCAAGAATAATAACTGGTGTATGGGGTCATCAAGT
TTTCTCAAACTGCGTATGAGGACTAAATCCCTAAAAGTGCAAGGTAAAAG
TTGTTTAGATTTTTTATGCTGTGTAAAAGAATTTAGACTAAAGGTGTATA
TTTTTTCCATCATGCAAATTCACAACTTGCACGGGTCACCTGTGACCCTT
ATAAATCAACTTGTGAGCCATGTTTGGAAAATTTTTGTTTTGATTGTTTG
AAGAGACATTTAATAAAACATTTTCTATTTTGGGGAAATTTGATCCGAAG
GAAATAGGTTTCTCAGGGCAAAATAGTAACAAGCCAATTAACAGCATTAC
AGTAACTATTTTAAAGACATCAAATGAAAATGGCACCTTCTTTATAATTT
TCATAGAAAAAGAAGTTCAAATTATCGGATTCTAATCAACCTTTTCAATG
AATTTTCGTTTGAACGAATCCAAGAGAAGCGATCTCAAAATTCGATTAAA
GTAAAAATTTCGAAATTTTTAAGAGATTATTTTTTTCGAGAGAAAAAAAA
AAGGGATTATCTTCATTTTAGGGATGTTTGTAAAAGATGCTCGCTTCATA
TTCTTATTCATTGTCTTATTCTTGGATGCGATTAAATGTCATCTTTATCA
AAAATACCTCATCCCATCACAAAGTTATACAAAAGAAGAAGAAGTTTTTC
GAACGAAATCACAAACCGAATGTTTATTACGTTGTGGGAAAAGAAAATGT
ATGAACACCATTATTGAAGATGAAAATTGTCAATGTACAACGACGGACTG
TCTGGCGAATCGAGCGGCGAGCAATGAAACGACGTCAATGGTCGAATGCT
ATGAATGTGAGTGGCAATGATGTTCGTTTCACCTTTCAAAGCAATTTATA
TTCCATGGGTCGTCACAGTCTTCTTTTGAAATATACTTGCTGATTAATTT
GTATTACGGAAATACGCTTTATTGCCAACAGTTCAACCTCGGGTAGCCTA
TCTCTATCCCAACACACGAGTTTTTGATCACGATGTCGAGGAAAAAGCCG
TGGTCGTCTGGTACAGGCAAAACCTTAGGATGTCAGCTAGGTCGAAGTGG
TAAAATAGTCAGATTCGGTTTGTTGTTTTCTAACTGATTTTATAAGCTTA
AAATTCTATTTTTAAAGTAAAGAGCCAGTGAGAATCACCTTATTGTAACT
TCCTATTATAGCTCCGCTGTTGCCGGTGACAGCAGGACCGATTTGTTACA
AAGGACGAAACAACCAATATGCTTCATTCACTATACCACACAAAGGAAAA
GTCAAGGACATTAAACTCCAACATGTCTCAGGTGGGATCGAGTGTTCGGA
AGACATAGGAAGTTCTGGTGCAAGTTATTGGGGTTGTCATCATTATGTTT
TTACTTCAACTGATATCTTGACACTCATCACAAACAATCAAAATATACCA
GTTTTTCCCCCGATTAGCCAGGGAGTAATAAAATTCACAATACCAGGTAC
ACATATTGATTCAGATGAGATTGTTTTCACTCCTTCGTCGCCAGTGGCAG
TTCAGAAGGGCGAAGAATTTCGTATTTGGAACACTGAAGATTTATATGAT
TCTGCTGACGGAGATAACCCTGGTACCCACTGTGTTCACGTCCTTGTCAA
ATTTTGCTGATATTTATAACCTCATACCTAACATTCCACACTCCAATAAT
AAAAAATAATAATTTAGCTAAGAAAAAATCAAAAGATTCCTATGATTCAA
TCCTGAGAAAAGTTGGTAACAGACGAACGAACGA Coding sequence (CDS) from alignment at sc0000073_pilon:1120773..1122706- >MSTRG.10544.1.p1 ID=MSTRG.10544.1.p1|Name=MSTRG.10544.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2376bp|location=Sequence derived from alignment at sc0000073_pilon:1120773..1122706- (Clytia hemisphaerica_ch_hm2_pilon)
CTCCGCTGTTGCCGGTGACAGCAGGACCGATTTGTTACAAAGGACGAAAC
AACCAATATGCTTCATTCACTATACCACACAAAGGAAAAGTCAAGGACAT
TAAACTCCAACATGTCTCAGGTGGGATCGAGTGTTCGGAAGACATAGGAA
GTTCTGGTGCAAGTTATTGGGGTTGTCATCATTATGTTTTTACTTCAACT
GATATCTTGACACTCATCACAAACAATCAAAATATACCAGTTTTTCCCCC
GATTAGCCAGGGAGTAATAAAATTCACAATACCAGGTACACATATTGATT
CAGATGAGATTGTTTTCACTCCTTCGTCGCCAGTGGCAGTTCAGAAGGGC
GAAGAATTTCGTATTTGGAACACTGAAGATTTATATGATTCTGCTGACGG
AGATAACCCTGGTACCCACTGTGTTCACGTCCTTGTCAAATTTTGCTGAG
GATGTTTGTAAAAGATGCTCGCTTCATATTCTTATTCATTGTCTTATTCT
TGGATGCGATTAAATGTCATCTTTATCAAAAATACCTCATCCCATCACAA
AGTTATACAAAAGAAGAAGAAGTTTTTCGAACGAAATCACAAACCGAATG
TTTATTACGTTGTGGGAAAAGAAAATGTATGAACACCATTATTGAAGATG
AAAATTGTCAATGTACAACGACGGACTGTCTGGCGAATCGAGCGGCGAGC
AATGAAACGACGTCAATGGTCGAATGCTATGAATATGGGGTCATCAAGTT
TTCTCAAACTGCGTATGAGGACTAAATCCCTAAAAGTGCAAGCTCCGCTG
TTGCCGGTGACAGCAGGACCGATTTGTTACAAAGGACGAAACAACCAATA
TGCTTCATTCACTATACCACACAAAGGAAAAGTCAAGGACATTAAACTCC
AACATGTCTCAGGTGGGATCGAGTGTTCGGAAGACATAGGAAGTTCTGGT
GCAAGTTATTGGGGTTGTCATCATTATGTTTTTACTTCAACTGATATCTT
GACACTCATCACAAACAATCAAAATATACCAGTTTTTCCCCCGATTAGCC
AGGGAGTAATAAAATTCACAATACCAGGTACACATATTGATTCAGATGAG
ATTGTTTTCACTCCTTCGTCGCCAGTGGCAGTTCAGAAGGGCGAAGAATT
TCGTATTTGGAACACTGAAGATTTATATGATTCTGCTGACGGAGATAACC
CTGGTACCCACTGTGTTCACGTCCTTGTCAAATTTTGCTGAGGATGTTTG
TAAAAGATGCTCGCTTCATATTCTTATTCATTGTCTTATTCTTGGATGCG
ATTAAATGTCATCTTTATCAAAAATACCTCATCCCATCACAAAGTTATAC
AAAAGAAGAAGAAGTTTTTCGAACGAAATCACAAACCGAATGTTTATTAC
GTTGTGGGAAAAGAAAATGTATGAACACCATTATTGAAGATGAAAATTGT
CAATGTACAACGACGGACTGTCTGGCGAATCGAGCGGCGAGCAATGAAAC
GACGTCAATGGTCGAATGCTATGAATATGGGGTCATCAAGTTTTCTCAAA
CTGCGTATGAGGACTAAATCCCTAAAAGTGCAAGCTCCGCTGTTGCCGGT
GACAGCAGGACCGATTTGTTACAAAGGACGAAACAACCAATATGCTTCAT
TCACTATACCACACAAAGGAAAAGTCAAGGACATTAAACTCCAACATGTC
TCAGGTGGGATCGAGTGTTCGGAAGACATAGGAAGTTCTGGTGCAAGTTA
TTGGGGTTGTCATCATTATGTTTTTACTTCAACTGATATCTTGACACTCA
TCACAAACAATCAAAATATACCAGTTTTTCCCCCGATTAGCCAGGGAGTA
ATAAAATTCACAATACCAGGTACACATATTGATTCAGATGAGATTGTTTT
CACTCCTTCGTCGCCAGTGGCAGTTCAGAAGGGCGAAGAATTTCGTATTT
GGAACACTGAAGATTTATATGATTCTGCTGACGGAGATAACCCTGGTACC
CACTGTGTTCACGTCCTTGTCAAATTTTGCTGAGGATGTTTGTAAAAGAT
GCTCGCTTCATATTCTTATTCATTGTCTTATTCTTGGATGCGATTAAATG
TCATCTTTATCAAAAATACCTCATCCCATCACAAAGTTATACAAAAGAAG
AAGAAGTTTTTCGAACGAAATCACAAACCGAATGTTTATTACGTTGTGGG
AAAAGAAAATGTATGAACACCATTATTGAAGATGAAAATTGTCAATGTAC
AACGACGGACTGTCTGGCGAATCGAGCGGCGAGCAATGAAACGACGTCAA
TGGTCGAATGCTATGAATATGGGGTCATCAAGTTTTCTCAAACTGCGTAT
GAGGACTAAATCCCTAAAAGTGCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073_pilon | genome | sc0000073_pilon:1120773..1122706 - |
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