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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:203080..209773+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.10371.1.p1 ID=MSTRG.10371.1.p1|Name=MSTRG.10371.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6694bp|location=Sequence derived from alignment at sc0000072_pilon:203080..209773+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCGTCCAAATTCGAGCAAAGAAATAGTTTTCCATAAAAGAAACACACAA
AATGGCGTTCATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCA
TTTTGTTAGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAAT
CTTGGAACATTCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCT
TGGCCTTATTGTAAGTatattaaaagctttttttataagaccaaCTTCAT
AAGAACATTAAGCTCAATTTCAGTCGAAATCTTAAGAATGATAccataaa
aattatattccagCATAAATATTAAAAGCATCTCAAGTTTATTTTGGCTG
TCTAGGACATTTTTTCATCGACTATTAAACCAGGCCTGTTTGGGTCACAG
TAAGATAGTTTGCTatattttaaagctcatttcTGCTActagtttgttta
cttttgttGGAGAATAAATCTTTAAACTTTAGGCTCCAAGCTAAAATTAC
ATGTGTATGTGTATGGCAAGAGTGTTAGAAACATTCACTTGGGAAAAACT
AAAACCTAATATTATTCTCTATTTCCCGGGCTCGTAAGGATCATCGGCTT
GAAATGGTTAGGATaaaaaaaGCCCGGGGCAGAAGGAGAAACTATCTACG
AATCAaagttcttttcaaaaattaagaaaaagtcTGATGAGAATTCGCTT
CAATAGCGTTAACTTGCTTTACTCGTGGGAGTTTGATCGGGCTGGCAGCT
TAATACAGGCCGGCCTACAGTAAATATGAAAGAATCATTTCTATTGGCTG
GCATTTGAAATCAACATCTAATTTGAAATCCAATTCTTTATCATCATTAG
CTCCAATCATGGTCGaaagatattgagattttagtttattttaacgCTTT
tccagaatttaaagttcgggagagaattgctattttagtacttttacttt
atttcattgaatatttcgattttagaggggtccGGTTAGCTTCTAGGCTA
AATTCCAatccttattggagcaaatttaaaaatcattcgttgtgttttaa
aatttcgcagcgagatcccctttgtctcaaatgtttCGTCCATGATTATC
TCATTTTTGATAATACGAGCTTCTGCGGACTCATTTTTCCTCTCCGTAAA
TTTCTAGCCTTGATGTTATTCTTTGAGCCAATCAAATTGCTTTTTACTTT
CTTTCTGTTAACCCTGGTCCACAACAGATGTAGAGTATTAAAATATTGCT
CCTTCTCTTTCAGATGTTCATCAATATTTTCACATTGTTATTGGCTATGG
GAACTAGAAGATTCATGATTGTAAGTGTTTtattgagcatttttatttgg
tctttgggttttgAAATAAGggacatgtttaaaggtcccaaACTTATacc
taaaaatgttttgactCGAGAATACATCAATTCATTAGATTGTGGCATTG
TTGCGGCAAATCCCGAATCGAAATTATCTTCTTCTGAGCATCGTCTACTT
GAATATTGAACATCCTgcaaaaagaccaaaaaaggTCAAACTTAGTTCTG
GAGAAAGGGAAAACAGGCCAGGTTATTGGGCTTATCCATTAAAAATCTAT
agaaaccttttcaagtcaaaataaAACTGTTGGAAATGTgaggatacccc
ctggaaagtgacaaaatttgcaaagaagaaacccttggaaaaaattagtT
TAATACTTCAAAGTGACGGGGAACGAACAAAAACTTGTCttttacccctt
ggaaattttagaataacttttcaccccctggaaaatgaaaaaaacactct
gAAAATGTTCgtcacccccctgtatggagatGAAATAGAATGGCCCGTTG
ATTTTGCGGAGTACTGAGCATTCAAATATGCCTActctatttttttatat
tcattgACAATGCATCATCATGGACACCAAGAACAGTAGATAGGACGTTA
ATGAAAGCTAGGactcttattttattttacgTTCAAGTTATTTAAGAGAT
TATGATTCCTTGTGCCAAAACACCACCCCGCCCTCGGAAACGGGTGTAAA
CGATGGGAAAAATGGTGTAATCTTGACACTACTCACactctaattttttt
tgttttcctttcagCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTT
GGTGTATGTATAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTT
TGAAAGATTCGGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTGCG
AAAAACCAACTACAGATGATCAATGTATCTGCTATGAAAATCAAGTACCA
CAACAATTCAAGGACGGATTCAAATGTAAGAATATAGATATGTATATAAA
GtctgtttcaaaaaatattgataggCCATACATTTTGATATATTGCTctt
aaagataattttgagcaaataaaactttaaatgtCCGCTTTACCcgtttt
cagccattttcagctATCGCTACTACGTTTTTCCTAGATTTCGATAGCAC
TCAAGAGAAATTTTTAcaatctctctctctctctctccctCCAAAGCCAT
AAGGTTTTCTTTCCTAGGAGACCTACCAGTTTAAAAGAAAGCTAGCACCA
TCAAAACCTTTTTTGGAATGTCATAGTTGCTGAGGTCTTCCAGTCAACGC
CCAAAGGTCTGATTTAAAACTGATTTAAAACAAGACCCAGTTTCTGTAAT
GAGAAATACATTCAAGGGACTTCAGAAGATTTCTCACAAATATCTTTAGG
GCTTGGATTGGCCAATTTTCTACTGCACATTTGCTTCaaaaaaaTGCTTT
AACGCTGTCAAccttttttcagaaatcaaaaatgttatcttgtaaaattt
tttacttcaagGCACTGGATTGTTAAATAccttaaaaaacaaacaggtTT
ACTCTGACCAATATTACAGCCATTTAGCGAGCGTGTTAAAGTAGATTAGA
TTCAAGTTTACGATAACTGTTAGCAAACatcaaatattttagatttatgg
TATTGGCCCTTACACATTTTTTGGCCCTGGTATCCAACAGTTCTATTTTT
GGCTTGATATGAGTAttactttttctgtttttagtTCAAGCATGTCCACT
CATCCATACTGGTGAAGATATGTGGCTAGCAATGATAGTATTGGCTGCAA
TAAACGCATTCTTTTCATTGGGAGGTCTATTGTTGTTCATTGTTGGCGCA
TGTCAGaaaaaaaGAGaggtaaaatgataaaaatggaaatattttcaaca
gtctcaatacagtagagtctcttaactcgaacctctatactTCGAGTGTC
TCCTTTAGTTGAGCAAGTTTTAtggttccttcagttaacaatgctttatA
AACCATACTCCATAACTGGAGATTTCCTtatctcgaacaaatttgtgttc
cccgtgcttgttcgagttatagagactgtATGATAGTGTGGGGAAATGTC
TTCTTTCCGATATCTTCCGATGTCTTTTTTAAACCTCGGGGAAAAACCAA
AATAAGTCAATATCTAAAAAGGAAGTCACTTTATAATGTCGCCTTAGTTA
TCAAAAATCCTAAAGTAATGTCGACACTACATGAACGCCAGCACATCTAC
CgtgaatatcaccatcatgttAAAAGCACAACTTACTCGAGAAAaatctt
caaccttttccaaTCAAGAGAAGCCTGTGAAGAGGTGACACTCACGGAAA
TGTGCACCTGTTTGTCAATTTCTTTTCACCCTCGTATTGTCCgagtgatt
ttgggacccttttatAGACAACCTATAAGGTTatacccctttgagggact
tttaaggtatgaaagAGTACACATACCCAACATCTATTTTGCCTTTCCCT
GATTAGGCCCTTCATTTATTGGACTTCTCTGATATGTAAAACAATTCTAC
TTTTAGGGTTGATAAGATTCTTGAAATAACTGATCATTTACAAGGAAGGG
AGGTTTATCAAACAATAATGGgatttattaattttcttttttttcgcttt
taGGGAAAAACCTTTGGTgagtaaaattttgattgtacATAGAGtttttt
ttCGGATCAAACACTTCCAACTTCTTCAAATCTAATACTTTCCGGCTGGT
GAAACTTCTTCAGAAAAGCCGTGGATGCTTTCTTTCTTCATCATCCCAGC
CAACACATAGCACACATGACAACAGTAGTTAAATGTACTACCCTATGGGC
CATTTCCTTGGGCATATCTTTTGGGCGTGCAGCTTTGGAAGCTACctggg
attttttttaattttgccaaaaactGTGACTTTCTTGGACTTTTCAAATT
TGTCTAAATTTCCTCTGCATTCTAAAGGGTCTAATCTTGAGACCCttttt
ttGTCCACAAACACGATAGTTTTCAGGGTCGAGTtcacccccccccttta
tatATTACGTCTCTCAGTCTAAAAACCACTGCTTAATTTCCCCGGAAATG
CTGGAAATCCCGGAAATCTAAAGCTTAAAAATTTAATACTTCATTCAGGA
CCTGGTGATTATGGATATTGAATGAGCGACTTGACGCAATGGTTGAATAA
GATGACGTAATGATGACGAAATAAAGTGTTTTTTGACTAACCTGTGTAAT
TTTGCTTTAATTTTCTATCAGTTGTACTGCTTCCCTAGTATCAGATTAAT
CTTAACTTGAGCCCTTTATTCTTAGTGAAATATTGTTCTAATATTCATTC
TAACATCTAGCAAGgaatagactagtaaaccatgTATCGTTGTATTTCGC
AGCAGCTTACGCTTGCATTGGGGTCACTTTGTTCGCTGATTACAATGGCT
CTCCAAACCACTTTTCCGCACCAATttcgttcttttataagaacgattta
TAAGCAATATTCCTGCATTCCTGTGTCTAAAGAAAGGCAGACGCTTTGCT
AGTCTAAGCAAGGAAggatcaagcaaaaaaatcatatttatcttTTGGAA
TAGATTACACTACGATTTTGTTAAATGGTTAAAAGCTTTGAGTAGAATTA
TACATCCCTTAAGACCAACTGGAACTCCTTCCCACTGGagaaatttggca
aaatatCGCTCCCCGtggaaaatatattcaaatttttatccccactaaaa
ataaataaaaagaccgaacctcaaaacaaaataatgctATTTTTCAATTC
CGCTGATTTTTCTGActaaaaaaacaatggaatatAAATCTCTCCAGCCA
TAACAgatatgagaatatcaatcccaatcgagtttcagttcgtGATTTAT
ACATccagctgaaaaaatcctactgggtctatGTCTGTCACAATCTTTCA
TATATTTACGATTTagtaaaatttttgtaaaatactataaataatttttt
ttctcgaatattttcatttttcttcttgtgGAACCAAAATAAAATCACTT
AAATAGATACATTACCGAtattatacaacttttttcacaaataatCTTAC
AATAAATTTTACAGTATCAAATATTGTTTTTAACGTCACAAACCCGTACC
CTGTCAACCAATAACTGTCCcagtaagaaaaaaaatctgcatatTTTCAT
CCTATTCGGAGACCAGACTGAACACACATCCTCACTGGGAAAATAATAGC
atagatttgaaaatttccaacttCGTCGTCGTGTATaacaggctttattt
acgttactgatggactCTATAGATCTGATACTATCAGTAAGCACAAGAAG
CCAATGCTACGGAGAGAACGAGGTTAAAGAATTGCCACCGCATTTTGAGT
AGTGGACAATAGAGCTTTATTTCTCCACCATTTAAAATCGTGATTTCCAA
TCTCATTGAGCTTTTTCATTGAGCTTTTTCATTCAAACCTTAGTTGCTAC
ATTATATTTCACAGGATTTTCGGAGACATACAGGGATATTTTTCTGTTTA
TTGCAATGCAATTCTTTTAGTCCATTTCATAACAGTTTTAATGCGTTTAT
CATGTACCGGCACACGAAATGCCTGTTCACCTGGGGTTCTTATAGACCGA
GATGAAGCACTCCAAAATCCATCATTATACCGAGTTTCTAACTCGTTACA
ATGTCCTGTTATAGAGTTAAACTCGACAAATTCTGAAATCATTCCATTCC
tatatttagatttttcatttttcgcttttaccaagcaattatcggatttt
ttGATTCCACATTCGGGGAAAATACATTTCGATCGGGTTTCTTTATCACC
CGATTCTTGATTTTTGTCTTTATTAAAATTTATTCTTGCGTAAATGCTCA
TTGAGAGTCCATAAGAGTTCTTGCGTTCTGGTAATAATTGATCCTTGATG
TTTTTATTATGGCATTTGAAAATCGGTTTATCAACTCGGCAATACCCGCA
TCTACCAGCTTCGTTTGGTAAGTAAATTATCAATGATGATGTTTGAGGTT
GATGGCCTTGAACTTCCATCATTCTCACAACATGTGATCTTTCGGGAAAG
AAATTTGGATTTTAGTttctgaaaaacaaaattaaatagGAGAATGTACT
TACCGACaaaaaaaGGGTAGGAAGAGCCTTAGCCTATCATTGATGTCGTG
TGTATATTTTTTgtgtatattttattttctatccaAAGTCCTAAACGACA
CTGTACTATTCTATCTGCTCCCGCATTCATTGAAAATCTTATTCCCTTGA
AAATCGGAGAGgggcgtcaactgtatataatGTCATTGCAAACC Coding sequence (CDS) from alignment at sc0000072_pilon:203080..209773+ >MSTRG.10371.1.p1 ID=MSTRG.10371.1.p1|Name=MSTRG.10371.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000072_pilon:203080..209773+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTTCATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCAT
TTTGTTAGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATC
TTGGAACATTCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTT
GGCCTTATTATGTTCATCAATATTTTCACATTGTTATTGGCTATGGGAAC
TAGAAGATTCATGATTCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTC
TTGGTGTATGTATAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAG
TTTGAAAGATTCGGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTG
CGAAAAACCAACTACAGATGATCAATGTATCTGCTATGAAAATCAAGTAC
CACAACAATTCAAGGACGGATTCAAATtTCAAGCATGTCCACTCATCCAT
ACTGGTGAAGATATGTGGCTAGCAATGATAGTATTGGCTGCAATAAACGC
ATTCTTTTCATTGGGAGGTCTATTGTTGTTCATTGTTGGCGCATGTCAGa
aaaaaaGAGagGGAAAAACCTTTGGACCTGGTGATTATGGATATTGAATG
GCGTTCATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCATTTT
GTTAGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATCTTG
GAACATTCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTTGGC
CTTATTATGTTCATCAATATTTTCACATTGTTATTGGCTATGGGAACTAG
AAGATTCATGATTCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTTG
GTGTATGTATAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTTT
GAAAGATTCGGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTGCGA
AAAACCAACTACAGATGATCAATGTATCTGCTATGAAAATCAAGTACCAC
AACAATTCAAGGACGGATTCAAATtTCAAGCATGTCCACTCATCCATACT
GGTGAAGATATGTGGCTAGCAATGATAGTATTGGCTGCAATAAACGCATT
CTTTTCATTGGGAGGTCTATTGTTGTTCATTGTTGGCGCATGTCAGaaaa
aaaGAGagGGAAAAACCTTTGGACCTGGTGATTATGGATATTGAATGGCG
TTCATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCATTTTGTT
AGCAATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATCTTGGAA
CATTCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTTGGCCTT
ATTATGTTCATCAATATTTTCACATTGTTATTGGCTATGGGAACTAGAAG
ATTCATGATTCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTTGGTG
TATGTATAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTTTGAA
AGATTCGGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTGCGAAAA
ACCAACTACAGATGATCAATGTATCTGCTATGAAAATCAAGTACCACAAC
AATTCAAGGACGGATTCAAATtTCAAGCATGTCCACTCATCCATACTGGT
GAAGATATGTGGCTAGCAATGATAGTATTGGCTGCAATAAACGCATTCTT
TTCATTGGGAGGTCTATTGTTGTTCATTGTTGGCGCATGTCAGaaaaaaa
GAGagGGAAAAACCTTTGGACCTGGTGATTATGGATATTGAATGGCGTTC
ATTTCAAACAAGGTGACAGGCTACGCATGCGCACTGACCATTTTGTTAGC
AATTTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATCTTGGAACAT
TCCATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTTGGCCTTATT
ATGTTCATCAATATTTTCACATTGTTATTGGCTATGGGAACTAGAAGATT
CATGATTCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTTGGTGTAT
GTATAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTTTGAAAGA
TTCGGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTGCGAAAAACC
AACTACAGATGATCAATGTATCTGCTATGAAAATCAAGTACCACAACAAT
TCAAGGACGGATTCAAATtTCAAGCATGTCCACTCATCCATACTGGTGAA
GATATGTGGCTAGCAATGATAGTATTGGCTGCAATAAACGCATTCTTTTC
ATTGGGAGGTCTATTGTTGTTCATTGTTGGCGCATGTCAGaaaaaaaGAG
agGGAAAAACCTTTGGACCTGGTGATTATGGATATTGAATGGCGTTCATT
TCAAACAAGGTGACAGGCTACGCATGCGCACTGACCATTTTGTTAGCAAT
TTCAGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATCTTGGAACATTCC
ATTCTTCCGAAGTGAAATCACATGTGGGAATATGGCTTGGCCTTATTATG
TTCATCAATATTTTCACATTGTTATTGGCTATGGGAACTAGAAGATTCAT
GATTCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTTGGTGTATGTA
TAGTTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTTTGAAAGATTC
GGTAATTTGAATCGCCAACAACTTACTGGAAGCTACTGCGAAAAACCAAC
TACAGATGATCAATGTATCTGCTATGAAAATCAAGTACCACAACAATTCA
AGGACGGATTCAAATtTCAAGCATGTCCACTCATCCATACTGGTGAAGAT
ATGTGGCTAGCAATGATAGTATTGGCTGCAATAAACGCATTCTTTTCATT
GGGAGGTCTATTGTTGTTCATTGTTGGCGCATGTCAGaaaaaaaGAGagG
GAAAAACCTTTGGACCTGGTGATTATGGATATTGAATGGCGTTCATTTCA
AACAAGGTGACAGGCTACGCATGCGCACTGACCATTTTGTTAGCAATTTC
AGCATGTGCTTCGTTGGTGCTTGGCTTTATGAATCTTGGAACATTCCATT
CTTCCGAAGTGAAATCACATGTGGGAATATGGCTTGGCCTTATTATGTTC
ATCAATATTTTCACATTGTTATTGGCTATGGGAACTAGAAGATTCATGAT
TCTTTCCTCCTCCTTTATCATCAGTATCTTTTGTCTTGGTGTATGTATAG
TTGCCATTGTTTTCTCTATTGATTATCGTAATGAGTTTGAAAGATTCGGT
AATTTGAATCGCCAACAACTTACTGGAAGCTACTGCGAAAAACCAACTAC
AGATGATCAATGTATCTGCTATGAAAATCAAGTACCACAACAATTCAAGG
ACGGATTCAAATtTCAAGCATGTCCACTCATCCATACTGGTGAAGATATG
TGGCTAGCAATGATAGTATTGGCTGCAATAAACGCATTCTTTTCATTGGG
AGGTCTATTGTTGTTCATTGTTGGCGCATGTCAGaaaaaaaGAGagGGAA
AAACCTTTGGACCTGGTGATTATGGATATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:203080..209773 + |
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