MSTRG.10359.1.p1 (mRNA) -

Overview
NameMSTRG.10359.1.p1
Unique NameMSTRG.10359.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000072_pilon:78756..80971-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10359.1.p1 ID=MSTRG.10359.1.p1|Name=MSTRG.10359.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2216bp|location=Sequence derived from alignment at sc0000072_pilon:78756..80971- (Clytia hemisphaerica_ch_hm2_pilon)
CGCGTCATTTTTATTACTTCAAATGACCAATTATTAAGTATCTTATAAAA
ACTCCATCTCATCTGATCATATTTTTCTGTATACTTTTTTAGCAAAGCCA
CAAATTCTCAGTAAAGAGACTTTAGTGTTTGCACCTGAAGGAATCACTTT
CGATTTCCCAAAATGTGACGTTCGAGTAAATCCACCAGCAAAAATCATAT
GGAAAAGAATCTTTTGGCCGTTGCCAGCCGGTCGTTTCACAGTTAAAGGA
GACAATTTGAAGATATCGAATATCCAGTTCAAAGATGAGGGATTTTATGT
TTGTGAAGCTGAAAACTTCCTTGGTAAGATACAACGGTGAAATTTTCGTT
GTCTTAAATTAGATGAAAAGAGTTTTTAGATTTTTTAAAATTTTATTTTT
GCTCAAAAGTGGATATCCAGGGGGTTAAATATCAACAAGGGAGCGGATAT
CCAGGGGGAAAGTGTCTTTTCAAGTAAAAAATACGATATCGGGGGTAAGC
ATCTTTATAAGAAAGGATACCCAGGGGGTTGAGCATATTCTTTAAGAGTG
GATATCTTTACTAATAAAGTAGAATATCCGGGTTCGATACTTCAAAAAAT
CAAGATCCTCAATGGTGGGGGGTAAAATTGTTTTCGGGAAAAGCCCATTT
TTTTGATTTTGAACAACATACCCTTAAGTAGTTCATTGACCTTGTGTGCC
TCCCTCCCTGTGGAGAAATAAATCTTGATAATGCATAACAATGGATATTC
ATATACAATTCATTATTGATTAAATTTCAGGAAAAACAAAAGCGAACATC
CAACTCAAAGTTAAGGTGATCGAAATTGAAAAATCGTCACCAGTACTTAT
CAAACTAGAAGCAGGTCAAGTTGCAGAGATCCACTGTTCAGCATACAGAA
ACAGCCAAAGTATGTCCGGTAAAATTACCCGGGCAGGATCCATTGAACTT
ATCCAAGAAGAGACAACTAGAACACCGAACTTGATTTCGGTCAAAACTTC
TGTTCGTGGAGAGGGAACTTATCGCTGCACGATTAGAAACAACAAGAGCG
GAAAACAAGTGGAAGCTGTTTCGCGAGTTGAGAATGGTGAGTAAAAAACC
TTTTAGGTCCTTTTACTTAGAAAATGGATCTGTTCAGATGTAAATATTAC
AAAATATCAAAGCTTTGAAATATCCAATTAAATTTACATAATATCACACA
CATAAATAAAGTCATAAAGTATAAACTAGGTCAAATATGCATGAAAATAC
TTTTGATTTCTACTTTTTTTCGAAACAGTGGGATGTGATAGTGGCTGGAC
GGAGTATTCAGGGGATTTCTATGCGTACATAAATCAAAAGAAGACATGGA
ATAATGCAGAGTTATATTGCATTTCAAAAGGAGATCACTTGGCAAGTATT
AAGAGCAAGCAGGAGAATGATTTTGTGTATAGATTGACAACTGGTGGACG
AAATGATTACTGGATAGGTAAGTTTAATTTGTAACTAACAAGAGACGCTT
GGTTGAAAGTTTATTTAGAATTCAACGAATACAAAATAGAAAGTTTTCAG
AGTGACATCCCCCTTCTCGCAGACCCAATGGAAAAAATGGCCAAAATATC
GCCCCCCCCCCCAGTCGAAAATCATCCTCACTGCAAAATAATGCATGCTA
TTTTTTCCATCCCGACTTAATATGCTTTGGAATTTAAACCTACATTGAGT
TTCAGTTCGTTATTTTTATCCCTGTTAGTTGAAAAAGTCCTACCTGATCT
GTAAAAAGAGGTTGTAGAGTTTAAAATTTCAATGCTGAACCTGGAGACAT
TCTTATTCTACATATCTTTTAAGGCTTATTGTAGGAGATGCAACAAGTAG
CAGAGCTAAGGTTCGGTTAACTTTTGTGAACGAATCTTTGATATTCTTTG
AGGCTTTTTTTAATAATAACCCTTTGAGTATTCACGAAGCAGAGAATCTA
CAGCAGCTTTTATGTTCTTTTAGGTATGTCTGATAAACAGGTAGAAGGCT
CATTCACTTGGAGTGACGGAAAAACTGCAACATACAAGAATTTCGCTAGC
GGACAGCCAAACAATGCTGCAAATCAAGACTGTGTATCATTTTACAAGAA
CTATGCCGACTATGCTGGAAAATGGAATGATTGGGAGTGCAGTAAATCCT
TTACTTTCGTATGCAAAATTGCACAATAAATAAAAATTCTCTAACAGAAA
CTAAATTGTACCAGAG

Coding sequence (CDS) from alignment at sc0000072_pilon:78756..80971-

>MSTRG.10359.1.p1 ID=MSTRG.10359.1.p1|Name=MSTRG.10359.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000072_pilon:78756..80971- (Clytia hemisphaerica_ch_hm2_pilon)
GTATGTCTGATAAACAGGTAGAAGGCTCATTCACTTGGAGTGACGGAAAA
ACTGCAACATACAAGAATTTCGCTAGCGGACAGCCAAACAATGCTGCAAA
TCAAGACTGTGTATCATTTTACAAGAACTATGCCGACTATGCTGGAAAAT
GGAATGATTGGGAGTGCAGTAAATCCTTTACTTTCGTATGCAAAATTGCA
CAATAATGGGATGTGATAGTGGCTGGACGGAGTATTCAGGGGATTTCTAT
GCGTACATAAATCAAAAGAAGACATGGAATAATGCAGAGTTATATTGCAT
TTCAAAAGGAGATCACTTGGCAAGTATTAAGAGCAAGCAGGAGAATGATT
TTGTGTATAGATTGACAACTGGTGGACGAAATGATTACTGGATAGATGTC
CGGTAAAATTACCCGGGCAGGATCCATTGAACTTATCCAAGAAGAGACAA
CTAGAACACCGAACTTGATTTCGGTCAAAACTTCTGTTCGTGGAGAGGGA
ACTTATCGCTGCACGATTAGAAACAACAAGAGCGGAAAACAAGTGGAAGC
TGTTTCGCGAGTTGAGAATGGTATGTCTGATAAACAGGTAGAAGGCTCAT
TCACTTGGAGTGACGGAAAAACTGCAACATACAAGAATTTCGCTAGCGGA
CAGCCAAACAATGCTGCAAATCAAGACTGTGTATCATTTTACAAGAACTA
TGCCGACTATGCTGGAAAATGGAATGATTGGGAGTGCAGTAAATCCTTTA
CTTTCGTATGCAAAATTGCACAATAATGGGATGTGATAGTGGCTGGACGG
AGTATTCAGGGGATTTCTATGCGTACATAAATCAAAAGAAGACATGGAAT
AATGCAGAGTTATATTGCATTTCAAAAGGAGATCACTTGGCAAGTATTAA
GAGCAAGCAGGAGAATGATTTTGTGTATAGATTGACAACTGGTGGACGAA
ATGATTACTGGATAGATGTCCGGTAAAATTACCCGGGCAGGATCCATTGA
ACTTATCCAAGAAGAGACAACTAGAACACCGAACTTGATTTCGGTCAAAA
CTTCTGTTCGTGGAGAGGGAACTTATCGCTGCACGATTAGAAACAACAAG
AGCGGAAAACAAGTGGAAGCTGTTTCGCGAGTTGAGAATGGTATGTCTGA
TAAACAGGTAGAAGGCTCATTCACTTGGAGTGACGGAAAAACTGCAACAT
ACAAGAATTTCGCTAGCGGACAGCCAAACAATGCTGCAAATCAAGACTGT
GTATCATTTTACAAGAACTATGCCGACTATGCTGGAAAATGGAATGATTG
GGAGTGCAGTAAATCCTTTACTTTCGTATGCAAAATTGCACAATAATGGG
ATGTGATAGTGGCTGGACGGAGTATTCAGGGGATTTCTATGCGTACATAA
ATCAAAAGAAGACATGGAATAATGCAGAGTTATATTGCATTTCAAAAGGA
GATCACTTGGCAAGTATTAAGAGCAAGCAGGAGAATGATTTTGTGTATAG
ATTGACAACTGGTGGACGAAATGATTACTGGATAGATGTCCGGTAAAATT
ACCCGGGCAGGATCCATTGAACTTATCCAAGAAGAGACAACTAGAACACC
GAACTTGATTTCGGTCAAAACTTCTGTTCGTGGAGAGGGAACTTATCGCT
GCACGATTAGAAACAACAAGAGCGGAAAACAAGTGGAAGCTGTTTCGCGA
GTTGAGAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10359MSTRG.10359Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10359.1.p1MSTRG.10359.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10359.1.p1.exon4MSTRG.10359.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10359.1.p1.exon3MSTRG.10359.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10359.1.p1.exon2MSTRG.10359.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10359.1.p1.exon1MSTRG.10359.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072_pilongenomesc0000072_pilon:78756..80971 -