MSTRG.10358.1.p1 (mRNA) -

Overview
NameMSTRG.10358.1.p1
Unique NameMSTRG.10358.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000072_pilon:64283..66221-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.10358.1.p1 ID=MSTRG.10358.1.p1|Name=MSTRG.10358.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1939bp|location=Sequence derived from alignment at sc0000072_pilon:64283..66221- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTCAAAATCAAATTCTCAATCTCAACACTTTCCAGTCAAAACAACAT CTGACATCCACCAATCCATCAATCTATCACCGCCAAACTTTAAACCTCCA ATCCACATCGTAGTAAATTCGACAAAACTATCTACAACTCACCAAACGAA TTTTATTTTTAGAAACGAAACAACAATGGCGTTTTCACTTTTTAACATGA TCAAGGTATGCCGGAACATTTTTATATAACTGGTAACAATTCTAATTTAG GCTAGTGGTATAAGGTGATTAACCTTGATTGCTGCACAGGCGACTGAGGT TCGATTCCCACTCGTAGTCGTTCACTTGGCAAGTGTATGAGCTTTCGTCC AGGTCAACCCATGCCATGGGAGGGGAATCGGGTAGTCATTACTAGTTTAT GTATATATTTTGAGGACGGTCCTTAAGGATTCAGGAAAATGTAATCTCTC AATTAAACCGAATTATTAATCGGTCGTGTAGTTTATCGGAGCAGAACCAT ACAAAGTAAATGAACTTGTTTGTAGCTCATAACATCATTTTCAATTGATT TTTCAGAATGTCACCACAATCATCGCGAAAAGCGAAAAGGCTTTGGACGG CGAAGTGCCAGTTGAGACGCCTGCTGCTGTCCAAAGCCAGGTGATCGAGA ATGTAATCGATTCCATTATCGAGTTACCTTTAAAAGGTAGCGGTATAATA GATAATAACTTTGACCCTCAATCTGACAGCAGTAGCAACATCAATACCGA TTACTCCAAAGAATCATTGGTGAGCGATAGCTTGATGAAACTGAGACATT CATTTAATGACAATGGTTCAGATGTTGATACCCCACACCAAATTGAACAT GATAGTAACGATGACGTCATTGCGAATAGGTACGTTCAACTTTTTCAAAC AACTGTCGTTATAATTGTCATTACAAGTTTTTTCTTACAAGAACAAACTA TATAAGAACATAAGGCTTCAATGGATAAAATATTAAGAACAAGTTAAGAA CATTCTAAGCCATTGCGGACTTTAAAACACACAATTTCTTAGGAAAATGG GCAAAGATACAAACAATATGATGAAAATAAGGATAATTTTAGAACATTAT TAGGTTTAAATTTTGGATATCAATATAAAAAAACGTGTACACTCATTGGG AGATTTTAACAAACGCGGAGTGAGGTTGGAGTAATGGAGACTATATAATG TATAAAAAATTCACCAAAGTTAATTTGTTCTATAGCAATGAAAGTGTTGA GCAGCCAAAGGTGGAACACCAACCGAGATTCACACCCTCATTATTATTCA TCATATTACTGGTCACATCATTCTCATTGTTGCTCGCCATCGAGCTGATC ACGTTCAATTACCAAGGGTAAGAAAGCTTGATTTTCATTTCATGAAAGTA ATTGCCCCGAAGCAAACTTGGTTAGTTTATAATCGTCCGCGTCATACATT GCTTACACTTTACAACATTATGGGAACTGAGCCTTTTAGATACTGTAGCT ATGACTATTCAAACTCATTGTTCGATACGCCAAAGGTTTGTTCAATATTT ACCACTGGTAATACACAGAGTACTTGACTTTTACAGTTCTCTTCCTAGAT GTGCTACGACCGATGTCTCTTTTTAATCCTACCCGAAAAAAAGAATTGCA TTCTATCTTAATGCGAATGTGTGTACACATACATGATCACTTGATATAAC GGATTGATTGACAAAATCAATAAAAAATCATCTTTTTGAGTTAAGCCTTT GATATCATTAACCATACAATCTTAGGATCCAGATCCCTGATGACACTACG ACAACTTGGGACTCCGTGCATGATTACATGGATCGATTTCTTCAATACAT TGATTTATCCAATGTATCGAAGTAATTGTTCCATGTAATGATGTTTTACG ATATCTTACTAAATTGTAACATGTCTAAGAATTATTTTT

Coding sequence (CDS) from alignment at sc0000072_pilon:64283..66221-

>MSTRG.10358.1.p1 ID=MSTRG.10358.1.p1|Name=MSTRG.10358.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0000072_pilon:64283..66221- (Clytia hemisphaerica_ch_hm2_pilon)
GATCCAGATCCCTGATGACACTACGACAACTTGGGACTCCGTGCATGATT
ACATGGATCGATTTCTTCAATACATTGATTTATCCAATGTATCGAAGTAA
CAATGAAAGTGTTGAGCAGCCAAAGGTGGAACACCAACCGAGATTCACAC
CCTCATTATTATTCATCATATTACTGGTCACATCATTCTCATTGTTGCTC
GCCATCGAGCTGATCACGTTCAATTACCAAGGAATGTCACCACAATCATC
GCGAAAAGCGAAAAGGCTTTGGACGGCGAAGTGCCAGTTGAGACGCCTGC
TGCTGTCCAAAGCCAGGTGATCGAGAATGTAATCGATTCCATTATCGAGT
TACCTTTAAAAGGTAGCGGTATAATAGATAATAACTTTGACCCTCAATCT
GACAGCAGTAGCAACATCAATACCGATTACTCCAAAGAATCATTGGTGAG
CGATAGCTTGATGAAACTGAGACATTCATTTAATGACAATGGTTCAGATG
TTGATACCCCACACCAAATTGAACATGATAGTAACGATGACGTCATTGCG
AATAGCATTCAAAATCAAATTCTCAATCTCAACACTTTCCAGTCAAAACA
ACATCTGACATCCACCAATCCATCAATCTATCACCGCCAAACTTTAAACC
TCCAATCCACATCGTAGTAAATTCGACAAAACTATCTACAACTCACCAAA
CGAATTTTATTTTTAGAAACGAAACAACAATGGCGTTTTCACTTTTTAAC
ATGATCAAGGATCCAGATCCCTGATGACACTACGACAACTTGGGACTCCG
TGCATGATTACATGGATCGATTTCTTCAATACATTGATTTATCCAATGTA
TCGAAGTAACAATGAAAGTGTTGAGCAGCCAAAGGTGGAACACCAACCGA
GATTCACACCCTCATTATTATTCATCATATTACTGGTCACATCATTCTCA
TTGTTGCTCGCCATCGAGCTGATCACGTTCAATTACCAAGGAATGTCACC
ACAATCATCGCGAAAAGCGAAAAGGCTTTGGACGGCGAAGTGCCAGTTGA
GACGCCTGCTGCTGTCCAAAGCCAGGTGATCGAGAATGTAATCGATTCCA
TTATCGAGTTACCTTTAAAAGGTAGCGGTATAATAGATAATAACTTTGAC
CCTCAATCTGACAGCAGTAGCAACATCAATACCGATTACTCCAAAGAATC
ATTGGTGAGCGATAGCTTGATGAAACTGAGACATTCATTTAATGACAATG
GTTCAGATGTTGATACCCCACACCAAATTGAACATGATAGTAACGATGAC
GTCATTGCGAATAGCATTCAAAATCAAATTCTCAATCTCAACACTTTCCA
GTCAAAACAACATCTGACATCCACCAATCCATCAATCTATCACCGCCAAA
CTTTAAACCTCCAATCCACATCGTAGTAAATTCGACAAAACTATCTACAA
CTCACCAAACGAATTTTATTTTTAGAAACGAAACAACAATGGCGTTTTCA
CTTTTTAACATGATCAAGGATCCAGATCCCTGATGACACTACGACAACTT
GGGACTCCGTGCATGATTACATGGATCGATTTCTTCAATACATTGATTTA
TCCAATGTATCGAAGTAACAATGAAAGTGTTGAGCAGCCAAAGGTGGAAC
ACCAACCGAGATTCACACCCTCATTATTATTCATCATATTACTGGTCACA
TCATTCTCATTGTTGCTCGCCATCGAGCTGATCACGTTCAATTACCAAGG
AATGTCACCACAATCATCGCGAAAAGCGAAAAGGCTTTGGACGGCGAAGT
GCCAGTTGAGACGCCTGCTGCTGTCCAAAGCCAGGTGATCGAGAATGTAA
TCGATTCCATTATCGAGTTACCTTTAAAAGGTAGCGGTATAATAGATAAT
AACTTTGACCCTCAATCTGACAGCAGTAGCAACATCAATACCGATTACTC
CAAAGAATCATTGGTGAGCGATAGCTTGATGAAACTGAGACATTCATTTA
ATGACAATGGTTCAGATGTTGATACCCCACACCAAATTGAACATGATAGT
AACGATGACGTCATTGCGAATAGCATTCAAAATCAAATTCTCAATCTCAA
CACTTTCCAGTCAAAACAACATCTGACATCCACCAATCCATCAATCTATC
ACCGCCAAACTTTAAACCTCCAATCCACATCGTAGTAAATTCGACAAAAC
TATCTACAACTCACCAAACGAATTTTATTTTTAGAAACGAAACAACAATG
GCGTTTTCACTTTTTAACATGATCAAGGATCCAGATCCCTGATGACACTA
CGACAACTTGGGACTCCGTGCATGATTACATGGATCGATTTCTTCAATAC
ATTGATTTATCCAATGTATCGAAGTAACAATGAAAGTGTTGAGCAGCCAA
AGGTGGAACACCAACCGAGATTCACACCCTCATTATTATTCATCATATTA
CTGGTCACATCATTCTCATTGTTGCTCGCCATCGAGCTGATCACGTTCAA
TTACCAAGGAATGTCACCACAATCATCGCGAAAAGCGAAAAGGCTTTGGA
CGGCGAAGTGCCAGTTGAGACGCCTGCTGCTGTCCAAAGCCAGGTGATCG
AGAATGTAATCGATTCCATTATCGAGTTACCTTTAAAAGGTAGCGGTATA
ATAGATAATAACTTTGACCCTCAATCTGACAGCAGTAGCAACATCAATAC
CGATTACTCCAAAGAATCATTGGTGAGCGATAGCTTGATGAAACTGAGAC
ATTCATTTAATGACAATGGTTCAGATGTTGATACCCCACACCAAATTGAA
CATGATAGTAACGATGACGTCATTGCGAATAGCATTCAAAATCAAATTCT
CAATCTCAACACTTTCCAGTCAAAACAACATCTGACATCCACCAATCCAT
CAATCTATCACCGCCAAACTTTAAACCTCCAATCCACATCGTAGTAAATT
CGACAAAACTATCTACAACTCACCAAACGAATTTTATTTTTAGAAACGAA
ACAACAATGGCGTTTTCACTTTTTAACATGATCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.10358MSTRG.10358Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10358.1.p1MSTRG.10358.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.10358.1.p1.exon4MSTRG.10358.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10358.1.p1.exon3MSTRG.10358.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10358.1.p1.exon2MSTRG.10358.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.10358.1.p1.exon1MSTRG.10358.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072_pilongenomesc0000072_pilon:64283..66221 -