|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069808 ID=TCONS_00069808|Name=TCONS_00069808|organism=Clytia hemisphaerica|type=transcript|length=1003bp
acaaaatggctgccatgaaagaaaaacaaggaaAGCAAAACCTACCAGCT
TGCCAGATATAAAATGCTGTGACTGGCAGCAATAAGTCAAGTGAATGTAT
GACTGATCCACAAGACCATGAAAAATACTATTGAGTTGAGTTAGAGAGCT
CCTTCCTCTGTGGTGAGTTGATGTTAACTGAAGAAAAGTGTGAGTGTGCA
CTATTTAAGGCCACATTAAGGAGATAATAAAAACTAAGGAGATAAAATAA
CTAATCATATATGATAAGATTATCTCTATAATaatagaaaatgtaaacaa
atgaaCTGTTCTACAAATTGACATCATGGAGATAATATGATATTGAAACA
AAATTGTAGTTTCTCATAATATTGAATAAAATTAGGGCAATGCCCGCTac
actagcaaccctgcggggcccaaggcgccgagtatgcacccggcacagtg
acaagccgttactagcaaccctgaccctaactaaCTGACAATAATCGAAT
CCTgacccccggaaaattaccacggactagaaagaatgaaaaaaattgaa
ggggctgaattgctgattgaaactagttTAGGGTACTGGCTAGGTATAAT
CGGAAAAACGTTCACACGGGAATTAGCACgcgagagaaaaggaaaataaa
gatgaagaaaaaacaacaaatcctttaaaaaaacacgttttcCAAGAAAT
TGAACTGCAAAAACACATTTCCACGAAAAAAAGAATCCAATATGGTGGTT
TGTTGTGATGAGTCAGCATTTTTCGTAACCAATCGCAAGAATAAAACCCC
CGTCtaatttgaagcaaaaaaagtttttctcaacAAGACGcgtctagtcg
ttgaaatttgagaatatcgtTCTAGATACGGTTTCCCGATTTTACCACTC
TAATAAGATTTTCCGGTGTGATGTTTTTCATTCAACGACTATACTAGTCT
ATAATGCATTACATTCTACATTCTTTCCGTTTtgccccccgggggggggg
ggg Run BLAST on NCBI transcript from alignment at scaffold_508:44493..45495 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069808 ID=TCONS_00069808|Name=TCONS_00069808|organism=Clytia hemisphaerica|type=transcript|length=1003bp|location=Sequence derived from alignment at scaffold_508:44493..45495 (Clytia hemisphaerica)
cccccccccccccggggggcaAAACGGAAAGAATGTAGAATGTAATGCAT
TATAGACTAGTATAGTCGTTGAATGAAAAACATCACACCGGAAAATCTTA
TTAGAGTGGTAAAATCGGGAAACCGTATCTAGAacgatattctcaaattt
caacgactagacgCGTCTTgttgagaaaaactttttttgcttcaaattaG
ACGGGGGTTTTATTCTTGCGATTGGTTACGAAAAATGCTGACTCATCACA
ACAAACCACCATATTGGATTCTTTTTTTCGTGGAAATGTGTTTTTGCAGT
TCAATTTCTTGgaaaacgtgtttttttaaaggatttgttgttttttcttc
atctttattttccttttctctcgcGTGCTAATTCCCGTGTGAACGTTTTT
CCGATTATACCTAGCCAGTACCCTAaactagtttcaatcagcaattcagc
cccttcaatttttttcattctttctagtccgtggtaattttccgggggtc
AGGATTCGATTATTGTCAGttagttagggtcagggttgctagtaacggct
tgtcactgtgccgggtgcatactcggcgccttgggccccgcagggttgct
agtgtAGCGGGCATTGCCCTAATTTTATTCAATATTATGAGAAACTACAA
TTTTGTTTCAATATCATATTATCTCCATGATGTCAATTTGTAGAACAGtt
catttgtttacattttctattATTATAGAGATAATCTTATCATATATGAT
TAGTTATTTTATCTCCTTAGTTTTTATTATCTCCTTAATGTGGCCTTAAA
TAGTGCACACTCACACTTTTCTTCAGTTAACATCAACTCACCACAGAGGA
AGGAGCTCTCTAACTCAACTCAATAGTATTTTTCATGGTCTTGTGGATCA
GTCATACATTCACTTGACTTATTGCTGCCAGTCACAGCATTTTATATCTG
GCAAGCTGGTAGGTTTTGCTttccttgtttttctttcatggcagccattt
tgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069808-exon-scaffold_508-1491911889:44493..45495 | TCONS_00069808-exon-scaffold_508-1491911889:44493..45495 | Clytia hemisphaerica | exon |
| TCONS_00069808-exon-scaffold_508-1510915933:44493..45495 | TCONS_00069808-exon-scaffold_508-1510915933:44493..45495 | Clytia hemisphaerica | exon |
| TCONS_00069808-exon-scaffold_508-1575043694:44493..45495 | TCONS_00069808-exon-scaffold_508-1575043694:44493..45495 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_508 | supercontig | scaffold_508:44493..45495 . |
Blast
The following BLAST results are available for this feature:
|
