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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068542 ID=TCONS_00068542|Name=TCONS_00068542|organism=Clytia hemisphaerica|type=transcript|length=470bp
TGCACCAACTGTCAACGGTGGAAGCCTTggaataagaaaaaaagttaaca
aaCAGCAAGAGCAAATACTCACCATGAAGATATCTCAACTCACATTGTGT
GCAAAGCTATACATAAATACTTTCTACTCAGCTCAAAGAACTAGGACTGG
CTTCATTGAAGATCCAGAGAAAGCTATTAAAGAAGTAACATCAGATGTAA
CCGAGTAGCTCTCAAACAATTTGAACCAAGATAATCTGAAACTGAATAGA
ACAAAANGAACATCAGATGTAACCGATTAGCTCTCAAACAGTTTGAACCA
AAATAATCTGAAACTGAATAGAACAATGAATGGCAATTAgAACCAGGACT
GGCTTCATTGAGGATCCAGAGAAAGTGAACAGGAGGAACATCCCATGAAG
CCGAATAAGCTCTTCGTCTTGAACAATTGGAACTGAAGAATCCAAAGCTG
AATAGAACAATATTAATGGC Run BLAST on NCBI transcript from alignment at scaffold_485:379173..380422- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068542 ID=TCONS_00068542|Name=TCONS_00068542|organism=Clytia hemisphaerica|type=transcript|length=1250bp|location=Sequence derived from alignment at scaffold_485:379173..380422- (Clytia hemisphaerica)
TGCACCAACTGTCAACGGTGGAAGCCTTGGAATAAGAAAAAAAGTTAACA
AACAGCAAGAGCAAATACTCACCATGAAGATATCTCAACTCACATTGTGT
GCAAAGCTATACATAAATACTTTCTACTCAGCTCAAAGAACTAGGACTGG
CTTCATTGAAGATCCAGAGAAAGCTATTAAAGAAGTAACATCAGATGTAA
CCGAGTAGCTCTCAAACAATTTGAACCAAGATAATCTGAAACTGAATAGA
ACAAAANGAACATCAGATGTAACCGATTAGCTCTCAAACAGTTTGAACCA
AAATAATCTGAAACTGAATAGAACAATGAATGGCAATTAGGTATTGATTT
TTTAATTGATATGATATTTTTAATGGGATAACCTCTAGCTGGTTTTACTA
ATTCTTTTAAGACTGTTGTCAGGTATATCCGTGCGTCAAAGGTTGTTCTA
ACGCCCAGTTTTAATATGAAACTTCATTTTCCACTCAATTTTGAGAATCA
TAATTTGGCATTTTGGTTCCACAGTTTGAAGTTTACCACAGGGTAACTTT
TTGTCAATGTAGGTTCGGGCAGCAAATTTCGTCAAAATCATTACAATTTG
TGTCTTTTTGTTAAATTCCTTTTAAGGTTACAAAACTATTACTCTATGAA
TCTTAGAGAAATCACCTATAGTGTTGGACTTGAGAATTAAAACTATACCC
AAATATTTTCTACTACTAACTCAAAGAGTCGATTTCAGTCGATTTCGAGC
ATTGTAATTTGGCATATTTTCGGCTTGACTGAGGAAAAATTGTAATTTTC
TTTTGTCAGCGAAATTACTGAGTTGACAAAAGAAAAGATGCTTCAAAATT
GATAAAAATTGATTATTTTGAGAGTGTAATCGTTTTACAAGTATTTTTTG
CCATCCACAAAGTCAAAAGTTTCACAAAATTTGATCCTCTAGTGAATTAA
TTTGAAGTTACCCTTCGGGCAACACTTTGTTAATCTAAGTCTGGGCAACA
CATTTTCCAAAATGATCACAATTTTCACATCGCTTTCGTATTCCTTCTAA
GGTTGATCACCCCATAGCGCTGGACTTGAGAATTAAAGCTAAACCCAAGT
ATTTTTTACTTAACTCAAAGAACCAGGACTGGCTTCATTGAGGATCCAGA
GAAAGTGAACAGGAGGAACATCCCATGAAGCCGAATAAGCTCTTCGTCTT
GAACAATTGGAACTGAAGAATCCAAAGCTGAATAGAACAATATTAATGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068542-exon-scaffold_485-1575043694:380083..380422 | TCONS_00068542-exon-scaffold_485-1575043694:380083..380422 | Clytia hemisphaerica | exon |
| TCONS_00068542-exon-scaffold_485-1575043694:379173..379302 | TCONS_00068542-exon-scaffold_485-1575043694:379173..379302 | Clytia hemisphaerica | exon |
| TCONS_00068542-exon-scaffold_485-1510915933:380083..380422 | TCONS_00068542-exon-scaffold_485-1510915933:380083..380422 | Clytia hemisphaerica | exon |
| TCONS_00068542-exon-scaffold_485-1510915933:379173..379302 | TCONS_00068542-exon-scaffold_485-1510915933:379173..379302 | Clytia hemisphaerica | exon |
| TCONS_00068542-exon-scaffold_485-1491911889:380083..380422 | TCONS_00068542-exon-scaffold_485-1491911889:380083..380422 | Clytia hemisphaerica | exon |
| TCONS_00068542-exon-scaffold_485-1491911889:379173..379302 | TCONS_00068542-exon-scaffold_485-1491911889:379173..379302 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_485 | supercontig | scaffold_485:379173..380422 - |
Blast
The following BLAST results are available for this feature:
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