TCONS_00067710 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067710
Unique NameTCONS_00067710
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067710 ID=TCONS_00067710|Name=TCONS_00067710|organism=Clytia hemisphaerica|type=transcript|length=229bp
GGGAATGCATGTGTTTCTGAAAGTAACTAACATCCCCAATCTctgaaaat
gttttgatttttcaattagGTTTGCTTCTCCCTTTGTCACCTTCCAGCAT
AATCAATGAAATGGTTTAACCAAGATCTGCGATCCCCACTTCGGGCTTGC
CTGGCCACGAATTACGTCACTGGGTTCACCCGGTTCACCTTTTTCTAATT
CCGTTATTGTACTCATTCCCCAAATGTGT
Run BLAST on NCBI

transcript from alignment at scaffold_472:340417..340645

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067710 ID=TCONS_00067710|Name=TCONS_00067710|organism=Clytia hemisphaerica|type=transcript|length=229bp|location=Sequence derived from alignment at scaffold_472:340417..340645 (Clytia hemisphaerica)
ACACATTTGGGGAATGAGTACAATAACGGAATTAGAAAAAGGTGAACCGG
GTGAACCCAGTGACGTAATTCGTGGCCAGGCAAGCCCGAAGTGGGGATCG
CAGATCTTGGTTAAACCATTTCATTGATTATGCTGGAAGGTGACAAAGGG
AGAAGCAAACctaattgaaaaatcaaaacattttcagAGATTGGGGATGT
TAGTTACTTTCAGAAACACATGCATTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042275XLOC_042275Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067710-exon-scaffold_472-1491911889:340417..340645TCONS_00067710-exon-scaffold_472-1491911889:340417..340645Clytia hemisphaericaexon
TCONS_00067710-exon-scaffold_472-1510915933:340417..340645TCONS_00067710-exon-scaffold_472-1510915933:340417..340645Clytia hemisphaericaexon
TCONS_00067710-exon-scaffold_472-1575043694:340417..340645TCONS_00067710-exon-scaffold_472-1575043694:340417..340645Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_472supercontigscaffold_472:340417..340645 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.14655	1.04661	0	0	0	4.57492	1.37986	0	4.52213	3.36084	2.17474	2.14438	6.4242	5.93031	1.21888	2.61609	3.22281	0.825819	0	2.38777	3.1131	3.03693	1.23059	3.35637	9.21861	13.3695	0	0	4.765	6.06847
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067710 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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