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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067690 ID=TCONS_00067690|Name=TCONS_00067690|organism=Clytia hemisphaerica|type=transcript|length=1990bp
TAATTAATCAATGAAGAAATTGAACAGTGTCAACATACATACAAAGTAAA
GGGGATTTTTTTATAGATAGATATCACATCAGTATCATTTTATTGCAATT
AACGTAACTCGAGTACTTtcgaaagagagagagagaaaactatcaaaatt
ttattgaagaaaaattgaaaacaacagACTAAATGTAACGGACTTGGAAA
ACTCTACATTACTGTATCTTAACTGGAAAAGATTTGAACACTTGTAAAAG
TTTTGCATTGTCATCCACTACAAAAAGAGGGCGTGCGAATCATTattaaa
aatcttcagaaataaAATACAGAGAAGAATCAACAGTAACGATGATGTCT
CAACCTATGTTAGCGACGACCAGTCATCCACAACACTTACACCACCCACA
ACAAACACAACAGcagcaacagcaacaacaacaacagcaacgtGATAACA
ACGACATTGAAGATTTTCTTAACATTCTCATTgacgataacacacacaaa
cacAACAACAATAAATCTCCACAACAATTATCCCCATGCAACCAACAACC
ATCACCGTCATTCAACATCccacaacaacagcaacaacgcCAGCCACAAC
ATTTCGGTGGTGGCTCACCCATAAATAACGGACAAATGCAATTAGCCACA
AGTCCACCAACGAATGTCCCAGAGGTGAAAATCAAATGCGAAGATAACAG
CGCCTCAGATTATCCACTCAGTGATGGAGATGGTTTTATTGACGATATGT
CTCCTTTCCATAGCGGTGTCTCTTCTCCTGGGAGCTCTTGTAGTGCAATG
AGTGGACCAGGCAGTCCCATCTTAATGGACTCAAACAGCCAACCACCTTT
TAATCAGAATTACTTAACACCTGAAAGTGCTTTCTACATGCAACCAGGTA
GTCCAACACACAGTGGAGGAGACAGTGCTGGCTCCTCGTATAAATACGAC
CCGAGACCGTTGGGACGAAAGAAGCGCCGTACCTTGGTACCAGATGATAA
GAAAAATACAGAGTATTGGGAAAAACGAAAACGTAATAATTTGGCCGCCC
GTCGATCACGTGAAGAGAGGCGTACAAAAGAGTTGCAAacttttgaaaca
atgaaacatcTACAACAAGAGAATAATGCTTTAAAACAAACAGTTAAAAT
GTTGATGGAAAgtcaaaatgaacttcaaaaagaAATCTTCAGTTTGAGAC
ATTGTTTAGAAGTCTCACAGGCTATGCTGAATAATAAACAAATCCCACAG
CCTAATAACCACCACCCTAATCCATTGTAAACATACTGCTGATTACACAG
ATGATGGTATAGCCTTTATGGTGGCTGAGTTTCAGGGGGAAATATGGAGT
TATAGACCTAGTGAGTATAGGACTATTTAATCTTAGATGGACATATGCAG
GCCACATGTATAAATCTCTTAAAAATTGTAAGTAAAAAACCCATTCTTCT
TTTATATGAAGCTTGTACAGGATTTTTAAAGCAGTTTGTCAAAATgggtt
ttaactttttttaaatcgtaTGTCTTAAATACTCACATCATACTACACCA
ATTAGCGAGAAAAATCTGAACCCTTTTCGGCATTCCTTAATGATTAGTAC
ATAGTGTATATATTTAAtgagcttttaaaaaaaaaaaaattagccttTCT
ATTGTTTTCCATGAAAACATTCCGAATTCCGCATCGGATTAGACTAATTA
CCGGCTTtcaaaaaatcgggaaaatcccGGGTTGTcctttttattgtttt
agatTTCTTCTTTCGGCATTCTTTTctgtttcaattttgttttttccttt
ctatattgttttaaatttcttatttttatcaaatatatgATATGTTTTAG
TTTTGTTAAGTTTTCTGAAATTATTTTCGATATTGATTTTAATTTAGGGT
ATAAAGAATTTTATATAAATATTAGACAGTAAAAAGTTTTATATGACAAT
ATTATACATTTTAAACTGAAAAGCAAAATTATTCAGTAAA Run BLAST on NCBI transcript from alignment at scaffold_472:310511..312500- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067690 ID=TCONS_00067690|Name=TCONS_00067690|organism=Clytia hemisphaerica|type=transcript|length=1990bp|location=Sequence derived from alignment at scaffold_472:310511..312500- (Clytia hemisphaerica)
TAATTAATCAATGAAGAAATTGAACAGTGTCAACATACATACAAAGTAAA
GGGGATTTTTTTATAGATAGATATCACATCAGTATCATTTTATTGCAATT
AACGTAACTCGAGTACTTTCGAAAGAGAGAGAGAGAAAACTATCAAAATT
TTATTGAAGAAAAATTGAAAACAACAGACTAAATGTAACGGACTTGGAAA
ACTCTACATTACTGTATCTTAACTGGAAAAGATTTGAACACTTGTAAAAG
TTTTGCATTGTCATCCACTACAAAAAGAGGGCGTGCGAATCATTATTAAA
AATCTTCAGAAATAAAATACAGAGAAGAATCAACAGTAACGATGATGTCT
CAACCTATGTTAGCGACGACCAGTCATCCACAACACTTACACCACCCACA
ACAAACACAACAGCAGCAACAGCAACAACAACAACAGCAACGTGATAACA
ACGACATTGAAGATTTTCTTAACATTCTCATTGACGATAACACACACAAA
CACAACAACAATAAATCTCCACAACAATTATCCCCATGCAACCAACAACC
ATCACCGTCATTCAACATCCCACAACAACAGCAACAACGCCAGCCACAAC
ATTTCGGTGGTGGCTCACCCATAAATAACGGACAAATGCAATTAGCCACA
AGTCCACCAACGAATGTCCCAGAGGTGAAAATCAAATGCGAAGATAACAG
CGCCTCAGATTATCCACTCAGTGATGGAGATGGTTTTATTGACGATATGT
CTCCTTTCCATAGCGGTGTCTCTTCTCCTGGGAGCTCTTGTAGTGCAATG
AGTGGACCAGGCAGTCCCATCTTAATGGACTCAAACAGCCAACCACCTTT
TAATCAGAATTACTTAACACCTGAAAGTGCTTTCTACATGCAACCAGGTA
GTCCAACACACAGTGGAGGAGACAGTGCTGGCTCCTCGTATAAATACGAC
CCGAGACCGTTGGGACGAAAGAAGCGCCGTACCTTGGTACCAGATGATAA
GAAAAATACAGAGTATTGGGAAAAACGAAAACGTAATAATTTGGCCGCCC
GTCGATCACGTGAAGAGAGGCGTACAAAAGAGTTGCAAACTTTTGAAACA
ATGAAACATCTACAACAAGAGAATAATGCTTTAAAACAAACAGTTAAAAT
GTTGATGGAAAGTCAAAATGAACTTCAAAAAGAAATCTTCAGTTTGAGAC
ATTGTTTAGAAGTCTCACAGGCTATGCTGAATAATAAACAAATCCCACAG
CCTAATAACCACCACCCTAATCCATTGTAAACATACTGCTGATTACACAG
ATGATGGTATAGCCTTTATGGTGGCTGAGTTTCAGGGGGAAATATGGAGT
TATAGACCTAGTGAGTATAGGACTATTTAATCTTAGATGGACATATGCAG
GCCACATGTATAAATCTCTTAAAAATTGTAAGTAAAAAACCCATTCTTCT
TTTATATGAAGCTTGTACAGGATTTTTAAAGCAGTTTGTCAAAATGGGTT
TTAACTTTTTTTAAATCGTATGTCTTAAATACTCACATCATACTACACCA
ATTAGCGAGAAAAATCTGAACCCTTTTCGGCATTCCTTAATGATTAGTAC
ATAGTGTATATATTTAATGAGCTTTTAAAAAAAAAAAAATTAGCCTTTCT
ATTGTTTTCCATGAAAACATTCCGAATTCCGCATCGGATTAGACTAATTA
CCGGCTTTCAAAAAATCGGGAAAATCCCGGGTTGTCCTTTTTATTGTTTT
AGATTTCTTCTTTCGGCATTCTTTTCTGTTTCAATTTTGTTTTTTCCTTT
CTATATTGTTTTAAATTTCTTATTTTTATCAAATATATGATATGTTTTAG
TTTTGTTAAGTTTTCTGAAATTATTTTCGATATTGATTTTAATTTAGGGT
ATAAAGAATTTTATATAAATATTAGACAGTAAAAAGTTTTATATGACAAT
ATTATACATTTTAAACTGAAAAGCAAAATTATTCAGTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067690-exon-scaffold_472-1575043694:310511..312500 | TCONS_00067690-exon-scaffold_472-1575043694:310511..312500 | Clytia hemisphaerica | exon |
| TCONS_00067690-exon-scaffold_472-1510915933:310511..312500 | TCONS_00067690-exon-scaffold_472-1510915933:310511..312500 | Clytia hemisphaerica | exon |
| TCONS_00067690-exon-scaffold_472-1491911889:310511..312500 | TCONS_00067690-exon-scaffold_472-1491911889:310511..312500 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_472 | supercontig | scaffold_472:310511..312500 - |
Blast
The following BLAST results are available for this feature:
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