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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063796 ID=TCONS_00063796|Name=TCONS_00063796|organism=Clytia hemisphaerica|type=transcript|length=2294bp
TTTATATCCTGttcaaagaagaaaatgtctCTCAACTAGAAGAATGATGG
TTACTGTGGTCAAAGAAATATAAATTATGCCACCAGCTTAGTCCTCAAAA
AGATAACCTATTCAGCTGATTCAAAAATTAAGTAACTTTCTATTGATGAA
AATATACAGAATTTCTATAgtataaacaaaagaacacaCATTCTGTATAA
ACAATAGAAACAATCGAAACATAATTAACACTTTGAAAATTAATTGTTTT
AGCAACCAATAAAATCAATCTGGTGGAGGAGGCTTATTCAAGAAAGCTTG
TATAGGCCGCAATTAGCTCAGAGACGCCTGATTTTAGATTCATCTATCAT
TGATTATAAGAATGAACGCTGGTTAAAAAAGGGACGCTTTGACTTTTCTT
TTCAACCAGTTAGCATTTCGTTCATTTACTCTAATGGGCTAACACGCAAA
ACTTTGATTAAAATTAAAGTTAGTGTTTCTTTCTTAGAAGATTGAGTGTA
GTGATTGCTTTCTTTGACCAGATTTGCATCGGCTTGCTTGGAGATTTTTC
TTTTATgcttcatgaaaaaaaatcatactttatccAGATTTTAATTGATC
GAAATCTACTGATTGGGAAGAATCACTTTGGTGTCAAGTCAAGATTTTTT
GGATTAACAACTTTTTAAAGAGAGGGTATTTTCAAGAAATCGAGCCATTT
GTAGATTGTTACCCCTTTGGTGAAATTGTGTATGATATTTAGCTGTTTGA
TAGCTAACAAGGAGGAGTAGTAGTAGTTGGTGAATTTTGACCGACACTGA
CATCGCGAGGATAGAATGCCGAAATCATTTTTATTGAAACGGACAGCCAA
TTTGAATCAAGATGAGTTGGTCCAACCACAAGGAGATGCTTTagcacttg
taaaaaatgaacagcgtgaaaacgaaagcgaaagtgatgatgatgaagaa
aacCAATGGAGGATCGaaacgGATAGCAAAGTAGATGTTTGCTCATTGGG
CGAAGATGGCGAAGATGATCGGTCGAGTTTCAGCAGTGAATGTCCAAGCA
ACACAAGTGAAAAGGAAAATCATCGTATGGCCACTGAAGTTGAATCGTTG
AAAAATGGAGTATTTGATTCTGTTCCATTCCCTCGCTCCTTCATGGAATT
TCTGAATGATGAAAGAATCACCAAAAGCCTTGAATCCATCGGTGATTACT
GCAAAGAAAAACATCGTGAAGTTACCGAACGAATTAGCCAAGAGTTATCC
GAAAAACCTTTCCTTGCATCATCAGTGAACAACAAACTTCATCCTAACCT
AGCATCTCAGCAACATTTTTACTCCAATAATGTATTACCGAGCATCCAGT
CTATCCTTCAATTCCGTAACCATCAACAACATCAACAACAGAATCACCAG
AAACAGCAACCACCATATCCAACAGCTAATTTTGCAAATGCTGCTTTCGG
TCATCTTCTCAAAGGATTTGAAGCAATTCAACCAGCACCTCATTTCCAGC
CAAACCATCTTCTTAACCATCAAATTGCTAATCTGAATCAATCCTTTGAA
GATAAACAGCCTTTAGACCGCAATTATCCTTGCAAAATCTGCAGCAAGAC
ATTCAAGAGGTCGTCCACATTATCAACCCACATGATGATTCATGCTAACA
TCCGACCCTTTGCTTGCACCTTCTGTGGCAAAAGATTTCACCAGAAATCT
GATATGCGTAAACATACTTACACCCATACAGGGGAAAAGCCTCATCAATG
TAATTTCTGTGGAAAATCATTCAGCCAGTCGTCAAACCTGATAACACATT
GCCGCAAACATAAAGGATTTAAACCATTCAGATGTAGCATCTGTTTGGAA
GATTTTCAACAGAAAATTGATCTACGTAAACATATGTAtacacatcaaaa
caaagattcgATAAGGCTGTAAACTGTAAAGTTTTGAAGTGATGGATGGA
GAAGGTCCAACCAGATGGTGTTTTCATTAATACACAGCTTCAAAGAGAAA
CACAACATTGTAAGGAGTATTTTAAAATACAGACGTTGCCTAAATGAATA
GCTGATACATGAATGGATGAATCAATAGCTGGCTTTCCGACCCAGTCAAC
TACATTTGCAAGGCCATTTTTAAGGCTGTTTCAAAATGGGGCTGCCTCTT
TTCACTTAATAAATCGTAGTAGAGGGAAGGCTTATACAATTGTAAGAAAA
GCTCGGTTACACAAATCGTGGCATATTTTACCTTAAAAAAGCCATTGCAG
ACATTGAAGTTTTTTCGAATTTCTATGGACTTTCAATTCTTCTG Run BLAST on NCBI protein sequence of TCONS_00063796-protein >TCONS_00063796-protein ID=TCONS_00063796-protein|Name=TCONS_00063796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MPKSFLLKRTANLNQDELVQPQGDALALVKNEQRENESESDDDEENQWRI
ETDSKVDVCSLGEDGEDDRSSFSSECPSNTSEKENHRMATEVESLKNGVF
DSVPFPRSFMEFLNDERITKSLESIGDYCKEKHREVTERISQELSEKPFL
ASSVNNKLHPNLASQQHFYSNNVLPSIQSILQFRNHQQHQQQNHQKQQPP
YPTANFANAAFGHLLKGFEAIQPAPHFQPNHLLNHQIANLNQSFEDKQPL
DRNYPCKICSKTFKRSSTLSTHMMIHANIRPFACTFCGKRFHQKSDMRKH
TYTHTGEKPHQCNFCGKSFSQSSNLITHCRKHKGFKPFRCSICLEDFQQK
IDLRKHMYTHQNKDSIRL Run BLAST on NCBI transcript from alignment at scaffold_400:151413..156420+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063796 ID=TCONS_00063796|Name=TCONS_00063796|organism=Clytia hemisphaerica|type=transcript|length=5008bp|location=Sequence derived from alignment at scaffold_400:151413..156420+ (Clytia hemisphaerica)
TTTATATCCTGttcaaagaagaaaatgtctCTCAACTAGAAGAATGATGG
TTACTGTGGTCAAAGAAATATAAATTATGCCACCAGCTTAGTCCTCAAAA
AGATAACCTATTCAGCTGATTCAAAAATTAAGTAACTTTCTATTGATGAA
AATATACAGAATTTCTATAgtataaacaaaagaacacaCATTCTGTATAA
ACAATAGAAACAATCGAAACATAATTAACACTTTGAAAATTAATTGTTTT
AGCAACCAATAAAATCAATCTGGTGGAGGAGGCTTATTCAAGAAAGCTTG
TATAGGCCGCAATTAGCTCAGAGACGCCTGATTTTAGATTCATCTATCAT
TGATTATAAGAATGAACGCTGGTTAAAAAAGGGACGCTTTGACTTTTCTT
TTCAACCAGTTAGCATTTCGTTCATTTACTCTAATGGGCTAACACGCAAA
ACTTTGATTAAAATTAAAGTTAGTGTTTCTTTCTTAGAAGATTGAGTGTA
GTGATTGCTTTCTTTGACCAGATTTGCATCGGCTTGCTTGGAGATTTTTC
TTTTATgcttcatgaaaaaaaatcatactttatccAGATTTTAATTGATC
GAAATCTACTGATTGGGAAGAATCACTTTGGTGTCAAGTCAAGATTTTTT
GGATTAACAACTTTTTAAAGAGAGGGTATTTTCAAGAAATCGAGCCATTT
GTAGATTGTTACCCCTTTGGTGAAATTGTGTATGATATTTAGCTGTTTGA
TAGCTAACAAGGAGGAGTAGTAGTAGTTGGTGAATTTTGACCGACACTGA
CATCGCGAGGATAGAATGCCGAAATCATTTTTATTGAAACGGACAGCCAA
TTTGAATCAAGATGAGTTGGTCCAACCACAAGGAGATGCTTTagcacttg
taaaaaatgaacagcgtgaaaacgaaagcgaaagtgatgatgatgaagaa
aacCAATGGAGGATCGGTGAGTTCtctcaaatattttcttttcagagCAT
TTCAGTTGTTTTTCCAAGTTTATCTCCCGTCAATCTCAGCGAAGTATGAA
AAGAGACTTTTTTTGCCTTAGCATTTagcaaaattcaacaaaattcaaca
aaattagaATCTAGGCTAATTTGTCGTATTGAGTCTATTTTCCGTCTGAG
ATGAATAACTTTCTTTGACcattagtagggggccaagcctttttatgacc
aaaatagttaCGCCATAAGCAAAACTGCAAGGAAAAATGGGTGGGAAAAT
AGCTGATTttcagggatgagctggagtttttacaagatacttcactaatt
ggttatttgaagtaatagagatgacgcgttctttagaaaaagtaacaaaa
ttgttttattacatcttaacgaccaaccaaatcaaacgagagcttgtaaa
aactccagcttgtcccgattttcaaaagtaaaaataaacgaaaatgattg
gtaccatctgaaagagcatgaaactctgagcaaaaaaatatattacagca
actctctgactaaaacacgcaaagaaatacagccgcttgaaGTTCGACGA
CGACCGACGTCAGTACGATTAATCAAATCACAGTAAAGCTGACAGTTAGT
TGTTCTTTAAGCtgttgtatttctttgtgtgttttagttaGAGAATTGTT
GTAATACagttttttgctcagaatttcatgctctttcagacGGTACCaac
attttcgtttattttgatttttgaaaatcagctattttCCTACCCCTTAT
TTTTTCCATgaagttttgcctatggcgtcactattttggtcacaaaaagt
tttcccgggccttatccgcgtcctccctctcaaaaatatcttgtaatata
cagTTCTTTGGAACAGActaaaatggctaggtcgtaaaaaagatgtcacg
gAACCCCAGGCTTTCCCCCCCCCCCCTACTACATACagaatttttcatct
tcatttggTCATTTTATACGAAGACGAATTTTCTCATTCCGTTTAAttta
cagttgagtctccataactcgaacacgcaaggGAAATAcagatttgttcg
agttaaggaaatttcgagttatggctTGAGGtatataaggcattgttaac
tgaagggtcgagtaaacttgttcgagttaaggagacattcgagttgtaga
ggttcgagttaaagagtatTTTCTACAACGCTTGTCCGAATTCACTCATG
TTTATGCCGACATTCAAGAATTTTTATCTTGACCGTTCGCTTTTACAGTT
TCGGAAAATCAGCGTTAATATTCACGCAGctaataaattgatttttttta
atattaacaTATTTTAATTACTAATTAATTTGTTTAATTTCTTGCTAATT
AGCGAAGTAGAATCATTCTGAACATGAGTAATTAATTCAAACTGCATGTC
CAATCTTTTTAGCTGATTTCAAAAGCGACATTTAAATAACTTCAAAAACT
GATGTATGGGGACTCCAACCAATATTTCTTCTCTGTACATTTTGCTTTTT
GGATCAGAACTGATTACACTCTTCTTTGTTACAttgtacagtagagtctc
tttaactcgaacctctataactcgaatgtctcctttcttcgaacaagttt
tatggtccacaactagtctagcaagctagacgactaattcagacatatta
gaaataaagcaaaaaagtaaattttagtcgtctagaaacctttgtgcact
aactccaaacaaaaaaaaagtgtcaatatcgcaattaaaattgtttcccg
ctcaaaaacaattcttgaaaacaaaatgtgtgtggatttgtgtgttaaaa
atgtttcatttgagttgatttcattttgagagtttgttgttgcttaataa
attgttttcaCGTTTGTTTTcccgctacgcaagtttctgcgtagctaggc
ccggtatctataaggctggaacaccggattcttccagtcgtttatacaaa
ctaaatcccgtatcattatttgtgtttattattagtattatatgcattat
aaacgactccagtctactccacaactcaaaatttccttaactcgaacaaa
tttgcgtcCCCCCTGCGTGTTCGAGTTGGTCCTGTCACAagagggcctct
aaaccgatcttGTACAAAAAACCTTTTTATCTTTAAGGTACAGTTTTATT
TAATtcccaaattttttattttcagaaacgGATAGCAAAGTAGATGTTTG
CTCATTGGGCGAAGATGGCGAAGATGATCGGTCGAGTTTCAGCAGTGAAT
GTCCAAGCAACACAAGTGAAAAGGAAAATCATCGTATGGCCACTGAAGGT
AAGAAATAAAAAACTCATCGTCACGTGATCACGTAAACTTTTTTTATCTA
TCACACATCACAAAAATCGCTAAGATCTGTCTTTACAAAAATAGCTTAat
tcacgcatcacgcctcaaattttttgCCCTATGAAATAATTATGCCAAAA
TTTTGATCACTCCGTCAtgccaaaaaaaatcgaatcatGCCATCACACAA
TAAACAGTCCAAATCACGCCATCGTAAGTACAACCTTGTCTCGgtaactt
ttttaataagaaagtACCGCACCTTTGGAAAATGGACCGCTCCTAAACCT
TTTTCTCCGATGTATGAAAAGACCTtaaatttgaacattttgaacATTGA
AAGCCACCAGCAAAACATTTAGGAAAAAATTGTGGAAAAGAAAGTCGTTA
GATCTTGTGGAGATTGATAAGATGGCTGAAACGGTGGTTCTCCATATAAT
TGAATGTTCACTTCACTATGTAAAGTATTCtgatatttactttttgcttt
tagTTGAATCGTTGAAAAATGGAGTATTTGATTCTGTTCCATTCCCTCGC
TCCTTCATGGAATTTCTGAATGATGAAAGAATCACCAAAAGCCTTGAATC
CATCGGTGATTACTGCAAAGAAAAACATCGTGAAGTTACCGAACGAATTA
GCCAAGAGTTATCCGAAAAACCTTTCCTTGCATCATCAGTGAACAACAAA
CTTCATCCTAACCTAGCATCTCAGCAACATTTTTACTCCAATAATGTATT
ACCGAGCATCCAGTCTATCCTTCAATTCCGTAACCATCAACAACATCAAC
AACAGAATCACCAGAAACAGCAACCACCATATCCAACAGCTAATTTTGCA
AATGCTGCTTTCGGTCATCTTCTCAAAGGATTTGAAGCAATTCAACCAGC
ACCTCATTTCCAGCCAAACCATCTTCTTAACCATCAAATTGCTAATCTGA
ATCAATCCTTTGAAGATAAACAGCCTTTAGACCGCAATTATCCTTGCAAA
ATCTGCAGCAAGACATTCAAGAGGTCGTCCACATTATCAACCCACATGAT
GATTCATGCTAACATCCGACCCTTTGCTTGCACCTTCTGTGGCAAAAGAT
TTCACCAGAAATCTGATATGCGTAAACATACTTACACCCATACAGGGGAA
AAGCCTCATCAATGTAATTTCTGTGGAAAATCATTCAGCCAGTCGTCAAA
CCTGATAACACATTGCCGCAAACATAAAGGATTTAAACCATTCAGATGTA
GCATCTGTTTGGAAGATTTTCAACAGAAAATTGATCTACGTAAACATATG
TAtacacatcaaaacaaagattcgATAAGGCTGTAAACTGTAAAGTTTTG
AAGTGATGGATGGAGAAGGTCCAACCAGATGGTGTTTTCATTAATACACA
GCTTCAAAGAGAAACACAACATTGTAAGGAGTATTTTAAAATACAGACGT
TGCCTAAATGAATAGCTGATACATGAATGGATGAATCAATAGCTGGCTTT
CCGACCCAGTCAACTACATTTGCAAGGCCATTTTTAAGGCTGTTTCAAAA
TGGGGCTGCCTCTTTTCACTTAATAAATCGTAGTAGAGGGAAGGCTTATA
CAATTGTAAGAAAAGCTCGGTTACACAAATCGTGGCATATTTTACCTTAA
AAAAGCCATTGCAGACATTGAAGTTTTTTCGAATTTCTATGGACTTTCAA
TTCTTCTG Coding sequence (CDS) from alignment at scaffold_400:151413..156420+ >TCONS_00063796 ID=TCONS_00063796|Name=TCONS_00063796|organism=Clytia hemisphaerica|type=CDS|length=3321bp|location=Sequence derived from alignment at scaffold_400:151413..156420+ (Clytia hemisphaerica)
ATGCCGAAATCATTTTTATTGAAACGGACAGCCAATTTGAATCAAGATGA
GTTGGTCCAACCACAAGGAGATGCTTTagcacttgtaaaaaatgaacagc
gtgaaaacgaaagcgaaagtgatgatgatgaagaaaacCAATGGAGGATC
GaaacgGATAGCAAAGTAGATGTTTGCTCATTGGGCGAAGATGGCGAAGA
TGATCGGTCGAGTTTCAGCAGTGAATGTCCAAGCAACACAAGTGAAAAGG
AAAATCATCGTATGGCCACTGAAGTTGAATCGTTGAAAAATGGAGTATTT
GATTCTGTTCCATTCCCTCGCTCCTTCATGGAATTTCTGAATGATGAAAG
AATCACCAAAAGCCTTGAATCCATCGGTGATTACTGCAAAGAAAAACATC
GTGAAGTTACCGAACGAATTAGCCAAGAGTTATCCGAAAAACCTTTCCTT
GCATCATCAGTGAACAACAAACTTCATCCTAACCTAGCATCTCAGCAACA
TTTTTACTCCAATAATGTATTACCGAGCATCCAGTCTATCCTTCAATTCC
GTAACCATCAACAACATCAACAACAGAATCACCAGAAACAGCAACCACCA
TATCCAACAGCTAATTTTGCAAATGCTGCTTTCGGTCATCTTCTCAAAGG
ATTTGAAGCAATTCAACCAGCACCTCATTTCCAGCCAAACCATCTTCTTA
ACCATCAAATTGCTAATCTGAATCAATCCTTTGAAGATAAACAGCCTTTA
GACCGCAATTATCCTTGCAAAATCTGCAGCAAGACATTCAAGAGGTCGTC
CACATTATCAACCCACATGATGATTCATGCTAACATCCGACCCTTTGCTT
GCACCTTCTGTGGCAAAAGATTTCACCAGAAATCTGATATGCGTAAACAT
ACTTACACCCATACAGGGGAAAAGCCTCATCAATGTAATTTCTGTGGAAA
ATCATTCAGCCAGTCGTCAAACCTGATAACACATTGCCGCAAACATAAAG
GATTTAAACCATTCAGATGTAGCATCTGTTTGGAAGATTTTCAACAGAAA
ATTGATCTACGTAAACATATGTAtacacatcaaaacaaagattcgATAAG
GCTGTAAATGCCGAAATCATTTTTATTGAAACGGACAGCCAATTTGAATC
AAGATGAGTTGGTCCAACCACAAGGAGATGCTTTagcacttgtaaaaaat
gaacagcgtgaaaacgaaagcgaaagtgatgatgatgaagaaaacCAATG
GAGGATCGaaacgGATAGCAAAGTAGATGTTTGCTCATTGGGCGAAGATG
GCGAAGATGATCGGTCGAGTTTCAGCAGTGAATGTCCAAGCAACACAAGT
GAAAAGGAAAATCATCGTATGGCCACTGAAGTTGAATCGTTGAAAAATGG
AGTATTTGATTCTGTTCCATTCCCTCGCTCCTTCATGGAATTTCTGAATG
ATGAAAGAATCACCAAAAGCCTTGAATCCATCGGTGATTACTGCAAAGAA
AAACATCGTGAAGTTACCGAACGAATTAGCCAAGAGTTATCCGAAAAACC
TTTCCTTGCATCATCAGTGAACAACAAACTTCATCCTAACCTAGCATCTC
AGCAACATTTTTACTCCAATAATGTATTACCGAGCATCCAGTCTATCCTT
CAATTCCGTAACCATCAACAACATCAACAACAGAATCACCAGAAACAGCA
ACCACCATATCCAACAGCTAATTTTGCAAATGCTGCTTTCGGTCATCTTC
TCAAAGGATTTGAAGCAATTCAACCAGCACCTCATTTCCAGCCAAACCAT
CTTCTTAACCATCAAATTGCTAATCTGAATCAATCCTTTGAAGATAAACA
GCCTTTAGACCGCAATTATCCTTGCAAAATCTGCAGCAAGACATTCAAGA
GGTCGTCCACATTATCAACCCACATGATGATTCATGCTAACATCCGACCC
TTTGCTTGCACCTTCTGTGGCAAAAGATTTCACCAGAAATCTGATATGCG
TAAACATACTTACACCCATACAGGGGAAAAGCCTCATCAATGTAATTTCT
GTGGAAAATCATTCAGCCAGTCGTCAAACCTGATAACACATTGCCGCAAA
CATAAAGGATTTAAACCATTCAGATGTAGCATCTGTTTGGAAGATTTTCA
ACAGAAAATTGATCTACGTAAACATATGTAtacacatcaaaacaaagatt
cgATAAGGCTGTAAATGCCGAAATCATTTTTATTGAAACGGACAGCCAAT
TTGAATCAAGATGAGTTGGTCCAACCACAAGGAGATGCTTTagcacttgt
aaaaaatgaacagcgtgaaaacgaaagcgaaagtgatgatgatgaagaaa
acCAATGGAGGATCGaaacgGATAGCAAAGTAGATGTTTGCTCATTGGGC
GAAGATGGCGAAGATGATCGGTCGAGTTTCAGCAGTGAATGTCCAAGCAA
CACAAGTGAAAAGGAAAATCATCGTATGGCCACTGAAGTTGAATCGTTGA
AAAATGGAGTATTTGATTCTGTTCCATTCCCTCGCTCCTTCATGGAATTT
CTGAATGATGAAAGAATCACCAAAAGCCTTGAATCCATCGGTGATTACTG
CAAAGAAAAACATCGTGAAGTTACCGAACGAATTAGCCAAGAGTTATCCG
AAAAACCTTTCCTTGCATCATCAGTGAACAACAAACTTCATCCTAACCTA
GCATCTCAGCAACATTTTTACTCCAATAATGTATTACCGAGCATCCAGTC
TATCCTTCAATTCCGTAACCATCAACAACATCAACAACAGAATCACCAGA
AACAGCAACCACCATATCCAACAGCTAATTTTGCAAATGCTGCTTTCGGT
CATCTTCTCAAAGGATTTGAAGCAATTCAACCAGCACCTCATTTCCAGCC
AAACCATCTTCTTAACCATCAAATTGCTAATCTGAATCAATCCTTTGAAG
ATAAACAGCCTTTAGACCGCAATTATCCTTGCAAAATCTGCAGCAAGACA
TTCAAGAGGTCGTCCACATTATCAACCCACATGATGATTCATGCTAACAT
CCGACCCTTTGCTTGCACCTTCTGTGGCAAAAGATTTCACCAGAAATCTG
ATATGCGTAAACATACTTACACCCATACAGGGGAAAAGCCTCATCAATGT
AATTTCTGTGGAAAATCATTCAGCCAGTCGTCAAACCTGATAACACATTG
CCGCAAACATAAAGGATTTAAACCATTCAGATGTAGCATCTGTTTGGAAG
ATTTTCAACAGAAAATTGATCTACGTAAACATATGTAtacacatcaaaac
aaagattcgATAAGGCTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063796-exon-scaffold_400-1491911889:151413..152378 | TCONS_00063796-exon-scaffold_400-1491911889:151413..152378 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1510915933:151413..152378 | TCONS_00063796-exon-scaffold_400-1510915933:151413..152378 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1575043694:151413..152378 | TCONS_00063796-exon-scaffold_400-1575043694:151413..152378 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1491911889:154588..154710 | TCONS_00063796-exon-scaffold_400-1491911889:154588..154710 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1510915933:154588..154710 | TCONS_00063796-exon-scaffold_400-1510915933:154588..154710 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1575043694:154588..154710 | TCONS_00063796-exon-scaffold_400-1575043694:154588..154710 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1491911889:155216..156420 | TCONS_00063796-exon-scaffold_400-1491911889:155216..156420 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1510915933:155216..156420 | TCONS_00063796-exon-scaffold_400-1510915933:155216..156420 | Clytia hemisphaerica | exon |
| TCONS_00063796-exon-scaffold_400-1575043694:155216..156420 | TCONS_00063796-exon-scaffold_400-1575043694:155216..156420 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_400 | supercontig | scaffold_400:151413..156420 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00063796 vs. Swiss-Prot (Human)
Match: GFI1B (Zinc finger protein Gfi-1b OS=Homo sapiens GN=GFI1B PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.820e-48 Identity = 74/112 (66.07%), Postives = 93/112 (83.04%), Query Frame = 3
Query: 1566 DRNYPCKICSKTFKRSSTLSTHMMIHANIRPFACTFCGKRFHQKSDMRKHTYTHTGEKPHQCNFCGKSFSQSSNLITHCRKHKGFKPFRCSICLEDFQQKIDLRKHMYTHQN 1901
+R++ C++C K FKRSSTLSTH++IH++ RP+ C FCGKRFHQKSDM+KHTY HTGEKPH+C CGK+FSQSSNLITH RKH GFKPF C +C + FQ+K+DLR+H + N
Sbjct: 217 ERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHN 328
The following BLAST results are available for this feature:
|
