|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060560 ID=TCONS_00060560|Name=TCONS_00060560|organism=Clytia hemisphaerica|type=transcript|length=1033bp
TCACGCTCCGAAAATAATTagaatgctagatcctatccatcggcacgaaa
tttaaaaagtcaaatttttgcttaaagcttaaagttgcctatctagccct
tcgggagtGAGTTTTAGTCGTTTCATGAAAagcattgaaaaataatttca
aagtttcatACGATTTTATACGATTATCTAATTTTCACTGTTGTGATAAA
TTTCTCCGATTTGAAAGTACGAAAATACTGACTGCCCTACAGTCGACTTG
TAGGATATCAATGGTCTTTAATATAAAAATACCAATCAATTTATAAAAGT
TTCGTTATGATTATTATAGTGCTCGGAAATATATTTCCATAGATAGCAAG
TTTACTAAAATTGAATCATTGGTTGATAAATGAGAAGGAATCCAAAAGTA
TATTTCTCCACATGGAAGTGATACAGTCCCGTGTTATATCTAGTGTCTTT
GTTATGTCATAATACCattctctttatttataaaaGTATCCAATTTTATT
CGTGAGAACAAAAAGTAAGTGTTTTCCATTTTATCAAGTTCTTTTTACAG
AGCGCTGATTGGTTGAACAATAAAACAATCGAATGATTCTCAGTTTAACA
AAACCTCATTTTCAAACCCATTTGATATAAAAATCTCTTCATCGAAATCA
TTAAAATCGTATTCCGGCAGTTCCGTCATTAGGTACTGCTTCCGGGGTAA
ATCCTAACCGGCGTCTAATCTCCGTTTGCCGGGCACGTGACGCTAAGGGA
GCACTGATTGTCATGGAATCATTTTGTGTGACGTCAGCCAGTGGTAATTT
GCTGAccactttttctttcttttgatcttcaattttctttcgcTCCAAGT
CATCCAAATCACTTTTCTTGAGTTCAATTCGCGAAGGTTTGTTGTACCGG
AGCATGATTTCAgtttaagtttttaattttttttttgctgtaagAAAAAA
GTTAAACGACAgttacaaaaaattcaaagtataAACTTTGGcaagaaaag
caaaaaattcGAGAATATAATTTTCTATCAGTC Run BLAST on NCBI transcript from alignment at scaffold_344:74286..75318 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060560 ID=TCONS_00060560|Name=TCONS_00060560|organism=Clytia hemisphaerica|type=transcript|length=1033bp|location=Sequence derived from alignment at scaffold_344:74286..75318 (Clytia hemisphaerica)
GACTGATAGAAAATTATATTCTCgaattttttgcttttcttgCCAAAGTT
tatactttgaattttttgtaacTGTCGTTTAACTTTTTTcttacagcaaa
aaaaaaattaaaaacttaaacTGAAATCATGCTCCGGTACAACAAACCTT
CGCGAATTGAACTCAAGAAAAGTGATTTGGATGACTTGGAgcgaaagaaa
attgaagatcaaaagaaagaaaaagtggTCAGCAAATTACCACTGGCTGA
CGTCACACAAAATGATTCCATGACAATCAGTGCTCCCTTAGCGTCACGTG
CCCGGCAAACGGAGATTAGACGCCGGTTAGGATTTACCCCGGAAGCAGTA
CCTAATGACGGAACTGCCGGAATACGATTTTAATGATTTCGATGAAGAGA
TTTTTATATCAAATGGGTTTGAAAATGAGGTTTTGTTAAACTGAGAATCA
TTCGATTGTTTTATTGTTCAACCAATCAGCGCTCTGTAAAAAGAACTTGA
TAAAATGGAAAACACTTACTTTTTGTTCTCACGAATAAAATTGGATACtt
ttataaataaagagaatGGTATTATGACATAACAAAGACACTAGATATAA
CACGGGACTGTATCACTTCCATGTGGAGAAATATACTTTTGGATTCCTTC
TCATTTATCAACCAATGATTCAATTTTAGTAAACTTGCTATCTATGGAAA
TATATTTCCGAGCACTATAATAATCATAACGAAACTTTTATAAATTGATT
GGTATTTTTATATTAAAGACCATTGATATCCTACAAGTCGACTGTAGGGC
AGTCAGTATTTTCGTACTTTCAAATCGGAGAAATTTATCACAACAGTGAA
AATTAGATAATCGTATAAAATCGTatgaaactttgaaattatttttcaat
gctTTTCATGAAACGACTAAAACTCactcccgaagggctagataggcaac
tttaagctttaagcaaaaatttgactttttaaatttcgtgccgatggata
ggatctagcattctAATTATTTTCGGAGCGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060560-exon-scaffold_344-1491911889:74286..75318 | TCONS_00060560-exon-scaffold_344-1491911889:74286..75318 | Clytia hemisphaerica | exon |
| TCONS_00060560-exon-scaffold_344-1510915933:74286..75318 | TCONS_00060560-exon-scaffold_344-1510915933:74286..75318 | Clytia hemisphaerica | exon |
| TCONS_00060560-exon-scaffold_344-1575043694:74286..75318 | TCONS_00060560-exon-scaffold_344-1575043694:74286..75318 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_344 | supercontig | scaffold_344:74286..75318 . |
Blast
The following BLAST results are available for this feature:
|
