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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060502 ID=TCONS_00060502|Name=TCONS_00060502|organism=Clytia hemisphaerica|type=transcript|length=4532bp
GGggttagcctgtaccaaactcttcgcATCCAAAAACcgataatataaaa
aaaaccaCCAATGGGATGGATGGTACAGGTTAGGCAGGAGTCGGTTAGGA
AACACTGTATTTGAAGTGACTGTACACTTTCCGCGATCCCAAACATGGAA
GATACGGAATTGAACTGAAATTGAGGTTGTGGGTCACCAACAGTCACCAA
TTACCTTCTCATTTGCAATTGAAGATCCTTTCAGACGTTGCTTTGACGTC
AATTGTTCTACCAATAAAGGAAACCTACAAAAACTCTGGTAAATTAATTC
GCATGGTAAAGAAGAATGGAGTACGGAAACTGATCGTGCTGTTTATAAAG
AGACACTTAGAAACACATTTTCTATCGAATTCCTCCGCAACTAACTTCGA
TTTAAAGACATCTCTCTAATTAATTAGAAAGCAATCATGTTTTGACCACA
GTATTGTGATGACATATTTGGTTTAATGATAAACAACGTAGCTCCTTTAC
TCAATCAATGAATATAATACATAAATATAAAAGTTCTTCCAATATATTGT
TGTTCAGACATTGAGTCGTCAACATCCAAGCGAGCGatagaaacattttt
gaagaagaATCACAGTTTGGAGTTATACAAATATGCATCTTCACTTAGTC
GTTTTCTTGACACTCACAATATGTGCAATAACAATCCATAGTCAAAATGC
AAATGCGAATGCAAACGCTTGGAAGGTACGACCGAGTAACAGGCCTCGAT
GGTTTACGCGACCCACAAGACCGACACGACCTGTTGTTACTTACACAGAT
TATGAAACAGCAACTTCTGCGTCAACACAACCGACTACAACTACGTCTCA
ACCAACAAAACCAACACCCAAAACTGAAACTGCAGCTACAACGAGATCAA
CATCAGACAGACCACAACCAACAACAACTAAACAAACAACAGCCACAACA
AGTAAACAGACAGCTTCAACCTATTCCACGTCACCAAAGACACCCATGAC
ACCTCCACGATCAACGAAAATGACAACAACTTTACGTTCTTCAATAACAG
AAAACACTGAGctaaaaccaacaacaaaacaaacacCCAATACAGAAATA
ACAACATCCTCGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAACC
TACCACAACACAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACAC
CGATTTCTACAACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAA
ACAACAACACAAGACCCCAACGTCACTAAAAACACTACTACAACAACTTC
TGAAACAACAGAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCAT
CCACAACCACATCAATCAGAACCATACCGACCGACGACAGTCTACCATTC
AccatttcaaaattcatcaaataCAAGATCGGAAAACTCTCAGATCTTTA
TGGTCTTCCTTTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGT
ACAATATCAAGAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCcg
aaattatatgaaaaatcaGTTAAAACAGCTGCGGATAAATTACTGAAGAC
ATTGAAACGacaaatcaaacaatttaaaCGAAAAGATAACCAAGTTTGTT
TTGGTAATCGAAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCA
GTTAAGAAAAACTTGAGTGGATTTTGTCAATTCTGTGTCTGTGTCAATGA
TGTTTCATTTAATGGTGAACAAATTTCTATAGCTTCAAGTAGCATCAAAT
CTTCCGAGACTGAGAGTATTGTTACTGCAACAACTTCCCCAAAAGCTACC
NCCAACAAAACCAACACCCAAAACTGAAACTGCAGCTACAACGAGATCAA
CATCAGACAGACCACAACCAACAACAACTAAACAAACAACAGCCACAACA
AGTAAACAGACAGCTTCAACCTATTCCACGTCACCAAAGACACCCATGAC
ACCTCCACGATCAACGAAAATGACAACAACTTTACGTTCTTCAATAACAG
AAAACACTGAGctaaaaccaacaacaaaacaaacacCCAATACAGAAATA
ACAACATCCTCGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAACC
TACCACAACACAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACAC
CGATTTCTACAACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAA
ACAACAACACAAGACCCCAACGTCACTAAAAACACTACTACAACAACTTC
TGAAACAACAGAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCAT
CCACAACCACATCAATCAGAACCATACCGACCGACGACAGTCTACCATTC
AccatttcaaaattcatcaaataCAAGATCGGAAAACTCTCAGATCTTTA
TGGTCTTCCTTTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGT
ACAATATCAAGAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCcg
aaattatatgaaaaatcaGTTAAAACAGCTGCGGATAAATTACTGAAGAC
ATTGAAACGacaaatcaaacaatttaaaCGAAAAGATAATCAAGTATGTT
TTGGTAATCGAAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCA
GTTAAGAAAAACGTGAGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATGA
TGTTTCATTTATTGGTGAGCAAATTTCTATAGCTTCAAGTAGCACCAAAT
CTTCCGAGACTGAGAGTATTGTTACTGCAACAACTTCCTCAAAAGATACA
GATGTTCATACAACAACTAATACTCCAGCAAAAATGACCACACCTCAAAC
TTCAGATCATTCTTCTCAAGAAGAGAACATCTCTGGTGAAAACTCGGCAA
CATTGATAGCATCAGAAGCAGAATCAACTCCACATGCTTCAATTGGCAGT
AACAATGAACGTTACAGAAGACGACGTTCTACAAATGGGATGACGGCAGA
AGAGCAAGCCGTTCTTGAAGAATTGAATCTTCACAACACATTGGGAGCAC
GTGCTACACTGAGAACAAATTGTCTGGAGAGGGGGAGTGGGAACGACCGA
AACACCATCAACATGTGTCGATCATGTCAATATGATATCAACTTACCCAG
CGATCATTACCCAGAATCCTTCATTCATACCACGTGCGGGAACGGTGAAG
ATATTTCATGTTTCACCAGTGAAGGTGTCTGCTCCAAAGTCATTGTCGTC
AAACCTGTTTTGAAATGGAAAGATGATGGTGGCTATCAAGAATTTCATGT
TCCAGTAACAATCGGATGTGCTTGTGAAATTATCAAGGGAAGCATTATGG
AGGTTTTTGTATAAATACGTCGATGCTGGAAAATTTTGCCTTTGGAGGAC
GATAGCTTACAACGTAAGTGTAAGAAAACTGAAGGTGTGTGATTCCAAAA
ACAACGCCAGTCCTTACTAAATTACAGTACTTACGAACTGAAACCTCCCA
TATGAGCATTTTAAACAATTTCGTGACAAATGTCTTTCTAAATGGAATGT
GTACCGGAAAGATTTACTGAAAATTACCGGAATTTATTGAAGCAGCGAAA
AATTAAAGCTGATATAGGGACGATACAAAACTATCAAacatgaattaaaa
ttgatcaTCTAATTCCGCCATTATACACTCTATTTCATCGTATTTGGAAT
TTAGAAAAGACTTCTATGTTTTATTTGAACCATNAAAGTCATTGTCGTCA
AACCTGTtttgaaatggaaaaatgaTGGTGGCTATCAAGAATTTCATGTT
CCAGTAACAATCGGATGTGCTTGTGAAATTATCAAGGGAAGCATTATGGA
GGTTTTTGTATAAATACGTCGATGCTGGAAAATTTTGCCTTTGGAGGACG
ATAGCTTACAACGTAAGTGTAAGAAAACTGAAGGTGTGTGATTCCAAAAA
CAACGCCAGTCCTTACTAAATTACAGTACTTACGAACTGAAACCTCCCAT
GTGAGCATTTTAAACAATTTCGTGACAAATGTCTTTCTAAATGGAATGTG
TACCGGAAAGATTTACTGAAAATTACCGGAATTTATTGAAGCAGCGAAAA
ATTAAAGCTGATATAGGGACGATACAAAACTATCAAacatgaattaaaat
tgatcaTCTAATTCCGCCATTATACACTCTATTTCATCGTATTTGGAATT
TAGAAAAGACTTCTATGTTTTATTTGAACCATCGATTTAAATTGCCTTAT
TTAGAACCATAGGGATATGGTATTGGACTGACTCGAAAAAACGGAGTGAT
ATTTCTTTtgctttgataaaattttatttttagaaattgtaTATTGATCt
tcgaaatgttttttttcatttgatcattttttaaatctgtATATAGAAAC
AAAACAAGGATTGAATATATTATATTAGTATCTGTAATTCGAATATATAA
AGTCTCAAATTAATTTCCAGATACTCTTAGCG Run BLAST on NCBI protein sequence of TCONS_00060502-protein >TCONS_00060502-protein ID=TCONS_00060502-protein|Name=TCONS_00060502-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MTPPRSTKMTTTLRSSITENTELKPTTKQTPNTEITTSSSRTTTAEPATR
QPTTTQKTRPATRQTPQTPISTTKSTVRPATDNTKTTTQDPNVTKNTTTT
TSETTEGTGQSTPTTDKSSTTTSIRTIPTDDSLPFTISKFIKYKIGKLSD
LYGLPFKSLTEIFAALNTYNIKKVIKTGVRYQACPKLYEKSVKTAADKLL
KTLKRQIKQFKRKDNQVCFGNRNGKYDCDECCKPSVKKNVSGFCQFCVCV
NDVSFIGEQISIASSSTKSSETESIVTATTSSKDTDVHTTTNTPAKMTTP
QTSDHSSQEENISGENSATLIASEAESTPHASIGSNNERYRRRRSTNGMT
AEEQAVLEELNLHNTLGARATLRTNCLERGSGNDRNTINMCRSCQYDINL
PSDHYPESFIHTTCGNGEDISCFTSEGVCSKVIVVKPVLKWKDDGGYQEF
HVPVTIGCACEIIKGSIMEVFV Run BLAST on NCBI transcript from alignment at scaffold_343:147260..153757- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060502 ID=TCONS_00060502|Name=TCONS_00060502|organism=Clytia hemisphaerica|type=transcript|length=6498bp|location=Sequence derived from alignment at scaffold_343:147260..153757- (Clytia hemisphaerica)
GGGGTTAGCCTGTACCAAACTCTTCGCATCCAAAAACCGATAATATAAAA
AAAACCACCAATGGGATGGATGGTACAGGTTAGGCAGGAGTCGGTTAGGA
AACACTGTATTTGAAGTGACTGTACACTTTCCGCGATCCCAAACATGGAA
GATACGGAATTGAACTGAAATTGAGGTTGTGGGTCACCAACAGTCACCAA
TTACCTTCTCATTTGCAATTGAAGATCCTTTCAGACGTTGCTTTGACGTC
AATTGTTCTACCAATAAAGGAAACCTACAAAAACTCTGGTAAATTAATTC
GCATGGTAAAGAAGAATGGAGTACGGAAACTGATCGTGCTGTTTATAAAG
AGACACTTAGAAACACATTTTCTATCGAATTCCTCCGCAACTAACTTCGA
TTTAAAGACATCTCTCTAATTAATTAGAAAGCAATCATGTTTTGACCACA
GTATTGTGATGACATATTTGGTTTAATGATAAACAACGTAGCTCCTTTAC
TCAATCAATGAATATAATACATAAATATAAAAGTTCTTCCAATATATTGT
TGTTCAGACATTGAGTCGTCAACATCCAAGCGAGCGATAGAAACATTTTT
GAAGAAGAATCACAGTTTGGAGTTATACAAATATGGTGAGCTCCTTGCTA
TACTATTTCAATTTAAGGATGGAAACGAAGAAAGTAGATAATTTAATTTG
ATTATTTTTGATAGTTTTAATTATATCGTAACATCTTCTTTTTGTGTTAT
GTTCGTTTCTTGGTTCATAAGAATGGGCTCTTCCAGAAAAAGTCCGTTCA
TGGGGGGTGGAGGATGAATTGTCCAGGGGTATTGAAAAAATACCAAAAAA
TTGCAATTTCCAGGGGGTAAATTTTAATGTCCAGGGGTAATTTTTTGTGT
CCACGGGGTTGGTTTGATGTTTGTCCAGGGGTATAACCCGTGTCCAGGGG
TCAAAAATCAAAATGTCCAGGGGTAAATCATGAAAAAAATAATATATCCT
CCACCCCCCATGAACGGATTTTTTCTGGAAGAGCCCAATTCTTGGAAAAA
TAGTTACAGCAAAAAATTAGTTTTTGAAGTGGTAGTTCTTCCTTCCTATA
TTTATAGTTATCGTTACCTATACTTTTAAGTGTAATATTACTTATGTCTT
TTCTTCACATTTTCGTCCCACACAGCATCTTCACTTAGTCGTTTTCTTGA
CACTCACAATATGTGCAATAACAATCCATAGTCAAAATGCAAATGCGAAT
GCAAACGCTTGGAAGGTACGACCGAGTAACAGGCCTCGATGGTTTACGCG
ACCCACAAGACCGACACGACCTGTTGTTACTTACACAGATTATGAAACAG
CAACTTCTGCGTCAACACAACCGACTACAACTACGTCTCAACCAACAAAA
CCAACACCCAAAACTGAAACTGCAGCTACAACGAGATCAACATCAGACAG
ACCACAACCAACAACAACTAAACAAACAACAGCCACAACAAGTAAACAGA
CAGCTTCAACCTATTCCACGTCACCAAAGACACCCATGACACCTCCACGA
TCAACGAAAATGACAACAACTTTACGTTCTTCAATAACAGAAAACACTGA
GCTAAAACCAACAACAAAACAAACACCCAATACAGAAATAACAACATCCT
CGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAACCTACCACAACA
CAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACACCGATTTCTAC
AACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAAACAACAACAC
AAGACCCCAACGTCACTAAAAACACTACTACAACAACTTCTGAAACAACA
GAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCATCCACAACCAC
ATCAATCAGAACCATACCGACCGACGACAGTCTACCATTCACCATTTCAA
AATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTTATGGTCTTCCT
TTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGTACAATATCAA
GAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGAAATTATATG
AAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGACATTGAAACGA
CAAATCAAACAATTTAAACGAAAAGATAACCAAGTTTGTTTTGGTAATCG
AAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCAGTTAAGAAAA
ACTTGAGTGGATTTTGTCAATTCTGTGTCTGTGTCAATGATGTTTCATTT
AATGGTGAACAAATTTCTATAGCTTCAAGTAGCATCAAATCTTCCGAGAC
TGAGAGTATTGTTACTGCAACAACTTCCCCAAAAGCTACCNCCAACAAAA
CCAACACCCAAAACTGAAACTGCAGCTACAACGAGATCAACATCAGACAG
ACCACAACCAACAACAACTAAACAAACAACAGCCACAACAAGTAAACAGA
CAGCTTCAACCTATTCCACGTCACCAAAGACACCCATGACACCTCCACGA
TCAACGAAAATGACAACAACTTTACGTTCTTCAATAACAGAAAACACTGA
GCTAAAACCAACAACAAAACAAACACCCAATACAGAAATAACAACATCCT
CGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAACCTACCACAACA
CAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACACCGATTTCTAC
AACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAAACAACAACAC
AAGACCCCAACGTCACTAAAAACACTACTACAACAACTTCTGAAACAACA
GAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCATCCACAACCAC
ATCAATCAGAACCATACCGACCGACGACAGTCTACCATTCACCATTTCAA
AATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTTATGGTCTTCCT
TTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGTACAATATCAA
GAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGAAATTATATG
AAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGACATTGAAACGA
CAAATCAAACAATTTAAACGAAAAGATAATCAAGTATGTTTTGGTAATCG
AAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCAGTTAAGAAAA
ACGTGAGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATGATGTTTCATTT
ATTGGTGAGCAAATTTCTATAGCTTCAAGTAGCACCAAATCTTCCGAGAC
TGAGAGTATTGTTACTGCAACAACTTCCTCAAAAGATACAGATGTTCATA
CAACAACTAATACTCCAGCAAAAATGACCACACCTCAAACTTCAGATCAT
TCTTCTCAAGAAGAGAACATCTCTGGTGAAAACTCGGCAACATTGATAGC
ATCAGAAGCAGAATCAACTCCACATGCTTCAATTGGCAGTAACAATGAAC
GTTACAGAAGACGACGTTCTACAAATGGTAAGAATTATGGTACTTTTTTA
AATGAGTCTCATAACATTCATTACATCTAGATCGTACTTAAACGATACTC
ATTAAATTGCAAAGAATACACGTTTTTTTTAAGAAACTAGTTTTACCAAG
CAGCCTCAATGTTTCTTAAGAAATTGGCCTTTTGAGCCTTAAATGTTTCT
TACATGTTTCTAAACATTTTGACATAATCAGCCTCATGGAAGGCTAGATT
GGAAGGTTCTTAAAAAACTAAATTTAAAAAAATGTTATTTTCTCATTCTC
AGCCTCAGCATGTTTCTTAGATGTTTCTTAGTTTTTAGGCATTCTGAGCC
TCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAACGTGTACTTTATA
TCTTAAATACGCTATATGTTTTTTATTTCTTAAGCATAGGGTTCATTTGA
GAAGAGGCTGGACAAAATGCTTAAAGATCTATTGTTATATCAGCTTATAA
ACGTTTATGTTTATAGATATTAAAACGACTTCGGTGAACGTTGTTTTAAA
ATCTCAGCGCATTTTTCATAGGGATGACGGCAGAAGAGCAAGCCGTTCTT
GAAGAATTGAATCTTCACAACACATTGGGAGCACGTGCTACACTGAGAAC
AAATTGTCTGGAGAGGGGGAGTGGGAACGACCGAAACACCATCAACATGT
GTCGATCATGTCAATATGATATCAACTTACCCAGCGAGTAAGAGTTGTTT
GCCTTTACTACTTTCTTATATGCAAGGTGTCTTTAAAGATCTCTGCAAAA
TTGGTTTAAACAAAAGATTCTTCTGTTAAACCAGGTATTTTTTGAGAAAC
TCTTTTACCAGTAGATTACTCCATCGTTGTTTAATTTCATCTTTTAATAC
CAGTGGTCCCTGGGAGAGACAATGGTTCAGCTCCATGGAAGCTGAGTCAT
TATTCCATGACCAGTCACTTAAAGGTTTTATCTTTACATAAGTGTTCCCG
TTTCATATATTTCATATCATTACAATGTCTCCCTATTGTTATATTATGGT
GATATAAGCAGAAAAGTGTTTTTCTTTTCCTCTTTCTGGCCAATGTTGCT
CCACATCCGTGTCAATCCAATGTTAAAAAGCTTGCGAATTAAAATGAGTA
AGCAAACGATATGACTCTTATTTAGAAACAAAACCTTTAAAATATTAGTG
ATTTTACTTGACTCCCATCTCCCCTTGATCTCCCATTTTCTATCGATTCT
TATTATTATAGTTTACTGAAATAGAATCTCCGATCCGCAACAGGAAAATT
GCGAAGGAGTACAGTTGAGTCTCTTCATAACTCGAACACGCACGGGGAAC
ACAAATTTGTTCGAGTTAAGGAAATTTCGTATTATGAAGTAAGGTTTATA
AGTCATTGTTAACTGAAGGGACGAGAAAACTTGCTCGAATTGAGGAGACA
TTCGAGTTATAGAGGTTCGAGTTAAAGAGACTCTTCTGCAGACTCTTCTT
CTTTATATATTTTGTATACCATGTGTGCTCTGAAATTATTTTATGGATTG
TTTCTCTATAAAAATAATTTTGACTTGTTACTTTCCATATTTTTTACTTT
CACTTATTCTTTCTTTCAGTCATTACCCAGAATCCTTCATTCATACCACG
TGCGGGAACGGTGAAGATATTTCATGTTTCACCAGTGAAGGTGTCTGCTC
CAAAGTCATTGTCGTCAAACCTGTTTTGAAATGGAAAGATGATGGTGGCT
ATCAAGAATTTCATGTTCCAGTAACAATCGGATGTGCTTGTGAAATTATC
AAGGGAAGCATTATGGAGGTTTTTGTATAAATACGTCGATGCTGGAAAAT
TTTGCCTTTGGAGGACGATAGCTTACAACGTAAGTGTAAGAAAACTGAAG
GTGTGTGATTCCAAAAACAACGCCAGTCCTTACTAAATTACAGTACTTAC
GAACTGAAACCTCCCATATGAGCATTTTAAACAATTTCGTGACAAATGTC
TTTCTAAATGGAATGTGTACCGGAAAGATTTACTGAAAATTACCGGAATT
TATTGAAGCAGCGAAAAATTAAAGCTGATATAGGGACGATACAAAACTAT
CAAACATGAATTAAAATTGATCATCTAATTCCGCCATTATACACTCTATT
TCATCGTATTTGGAATTTAGAAAAGACTTCTATGTTTTATTTGAACCATN
AAAGTCATTGTCGTCAAACCTGTTTTGAAATGGAAAAATGATGGTGGCTA
TCAAGAATTTCATGTTCCAGTAACAATCGGATGTGCTTGTGAAATTATCA
AGGGAAGCATTATGGAGGTTTTTGTATAAATACGTCGATGCTGGAAAATT
TTGCCTTTGGAGGACGATAGCTTACAACGTAAGTGTAAGAAAACTGAAGG
TGTGTGATTCCAAAAACAACGCCAGTCCTTACTAAATTACAGTACTTACG
AACTGAAACCTCCCATGTGAGCATTTTAAACAATTTCGTGACAAATGTCT
TTCTAAATGGAATGTGTACCGGAAAGATTTACTGAAAATTACCGGAATTT
ATTGAAGCAGCGAAAAATTAAAGCTGATATAGGGACGATACAAAACTATC
AAACATGAATTAAAATTGATCATCTAATTCCGCCATTATACACTCTATTT
CATCGTATTTGGAATTTAGAAAAGACTTCTATGTTTTATTTGAACCATCG
ATTTAAATTGCCTTATTTAGAACCATAGGGATATGGTATTGGACTGACTC
GAAAAAACGGAGTGATATTTCTTTTGCTTTGATAAAATTTTATTTTTAGA
AATTGTATATTGATCTTCGAAATGTTTTTTTTCATTTGATCATTTTTTAA
ATCTGTATATAGAAACAAAACAAGGATTGAATATATTATATTAGTATCTG
TAATTCGAATATATAAAGTCTCAAATTAATTTCCAGATACTCTTAGCG Coding sequence (CDS) from alignment at scaffold_343:147260..153757- >TCONS_00060502 ID=TCONS_00060502|Name=TCONS_00060502|organism=Clytia hemisphaerica|type=CDS|length=4257bp|location=Sequence derived from alignment at scaffold_343:147260..153757- (Clytia hemisphaerica)
TCATTACCCAGAATCCTTCATTCATACCACGTGCGGGAACGGTGAAGATA
TTTCATGTTTCACCAGTGAAGGTGTCTGCTCCAAAGTCATTGTCGTCAAA
CCTGTTTTGAAATGGAAAGATGATGGTGGCTATCAAGAATTTCATGTTCC
AGTAACAATCGGATGTGCTTGTGAAATTATCAAGGGAAGCATTATGGAGG
TTTTTGTATAAGGATGACGGCAGAAGAGCAAGCCGTTCTTGAAGAATTGA
ATCTTCACAACACATTGGGAGCACGTGCTACACTGAGAACAAATTGTCTG
GAGAGGGGGAGTGGGAACGACCGAAACACCATCAACATGTGTCGATCATG
TCAATATGATATCAACTTACCCAGCGAATGACACCTCCACGATCAACGAA
AATGACAACAACTTTACGTTCTTCAATAACAGAAAACACTGAGCTAAAAC
CAACAACAAAACAAACACCCAATACAGAAATAACAACATCCTCGTCCAGG
ACGACTACAGCAGAACCTGCTACGAGGCAACCTACCACAACACAGAAGAC
ACGACCTGCAACAAGACAGACTCCTCAAACACCGATTTCTACAACAAAAT
CGACAGTAAGACCAGCAACAGACAATACGAAAACAACAACACAAGACCCC
AACGTCACTAAAAACACTACTACAACAACTTCTGAAACAACAGAAGGGAC
TGGTCAATCAACACCTACAACAGATAAGTCATCCACAACCACATCAATCA
GAACCATACCGACCGACGACAGTCTACCATTCACCATTTCAAAATTCATC
AAATACAAGATCGGAAAACTCTCAGATCTTTATGGTCTTCCTTTTAAATC
ATTGACCGAAATCTTTGCAGCTCTGAACACGTACAATATCAAGAAAGTCA
TCAAGACAGGTGTCCGGTACCAAGCTTGTCCGAAATTATATGAAAAATCA
GTTAAAACAGCTGCGGATAAATTACTGAAGACATTGAAACGACAAATCAA
ACAATTTAAACGAAAAGATAATCAAGTATGTTTTGGTAATCGAAATGGGA
AATATGATTGCGATGAATGTTGTAAACCTTCAGTTAAGAAAAACGTGAGT
GGGTTTTGTCAATTCTGTGTTTGTGTCAATGATGTTTCATTTATTGGTGA
GCAAATTTCTATAGCTTCAAGTAGCACCAAATCTTCCGAGACTGAGAGTA
TTGTTACTGCAACAACTTCCTCAAAAGATACAGATGTTCATACAACAACT
AATACTCCAGCAAAAATGACCACACCTCAAACTTCAGATCATTCTTCTCA
AGAAGAGAACATCTCTGGTGAAAACTCGGCAACATTGATAGCATCAGAAG
CAGAATCAACTCCACATGCTTCAATTGGCAGTAACAATGAACGTTACAGA
AGACGACGTTCTACAAATGTCATTACCCAGAATCCTTCATTCATACCACG
TGCGGGAACGGTGAAGATATTTCATGTTTCACCAGTGAAGGTGTCTGCTC
CAAAGTCATTGTCGTCAAACCTGTTTTGAAATGGAAAGATGATGGTGGCT
ATCAAGAATTTCATGTTCCAGTAACAATCGGATGTGCTTGTGAAATTATC
AAGGGAAGCATTATGGAGGTTTTTGTATAAGGATGACGGCAGAAGAGCAA
GCCGTTCTTGAAGAATTGAATCTTCACAACACATTGGGAGCACGTGCTAC
ACTGAGAACAAATTGTCTGGAGAGGGGGAGTGGGAACGACCGAAACACCA
TCAACATGTGTCGATCATGTCAATATGATATCAACTTACCCAGCGAATGA
CACCTCCACGATCAACGAAAATGACAACAACTTTACGTTCTTCAATAACA
GAAAACACTGAGCTAAAACCAACAACAAAACAAACACCCAATACAGAAAT
AACAACATCCTCGTCCAGGACGACTACAGCAGAACCTGCTACGAGGCAAC
CTACCACAACACAGAAGACACGACCTGCAACAAGACAGACTCCTCAAACA
CCGATTTCTACAACAAAATCGACAGTAAGACCAGCAACAGACAATACGAA
AACAACAACACAAGACCCCAACGTCACTAAAAACACTACTACAACAACTT
CTGAAACAACAGAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCA
TCCACAACCACATCAATCAGAACCATACCGACCGACGACAGTCTACCATT
CACCATTTCAAAATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTT
ATGGTCTTCCTTTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACG
TACAATATCAAGAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCC
GAAATTATATGAAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGA
CATTGAAACGACAAATCAAACAATTTAAACGAAAAGATAATCAAGTATGT
TTTGGTAATCGAAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTC
AGTTAAGAAAAACGTGAGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATG
ATGTTTCATTTATTGGTGAGCAAATTTCTATAGCTTCAAGTAGCACCAAA
TCTTCCGAGACTGAGAGTATTGTTACTGCAACAACTTCCTCAAAAGATAC
AGATGTTCATACAACAACTAATACTCCAGCAAAAATGACCACACCTCAAA
CTTCAGATCATTCTTCTCAAGAAGAGAACATCTCTGGTGAAAACTCGGCA
ACATTGATAGCATCAGAAGCAGAATCAACTCCACATGCTTCAATTGGCAG
TAACAATGAACGTTACAGAAGACGACGTTCTACAAATGTCATTACCCAGA
ATCCTTCATTCATACCACGTGCGGGAACGGTGAAGATATTTCATGTTTCA
CCAGTGAAGGTGTCTGCTCCAAAGTCATTGTCGTCAAACCTGTTTTGAAA
TGGAAAGATGATGGTGGCTATCAAGAATTTCATGTTCCAGTAACAATCGG
ATGTGCTTGTGAAATTATCAAGGGAAGCATTATGGAGGTTTTTGTATAAG
GATGACGGCAGAAGAGCAAGCCGTTCTTGAAGAATTGAATCTTCACAACA
CATTGGGAGCACGTGCTACACTGAGAACAAATTGTCTGGAGAGGGGGAGT
GGGAACGACCGAAACACCATCAACATGTGTCGATCATGTCAATATGATAT
CAACTTACCCAGCGAATGACACCTCCACGATCAACGAAAATGACAACAAC
TTTACGTTCTTCAATAACAGAAAACACTGAGCTAAAACCAACAACAAAAC
AAACACCCAATACAGAAATAACAACATCCTCGTCCAGGACGACTACAGCA
GAACCTGCTACGAGGCAACCTACCACAACACAGAAGACACGACCTGCAAC
AAGACAGACTCCTCAAACACCGATTTCTACAACAAAATCGACAGTAAGAC
CAGCAACAGACAATACGAAAACAACAACACAAGACCCCAACGTCACTAAA
AACACTACTACAACAACTTCTGAAACAACAGAAGGGACTGGTCAATCAAC
ACCTACAACAGATAAGTCATCCACAACCACATCAATCAGAACCATACCGA
CCGACGACAGTCTACCATTCACCATTTCAAAATTCATCAAATACAAGATC
GGAAAACTCTCAGATCTTTATGGTCTTCCTTTTAAATCATTGACCGAAAT
CTTTGCAGCTCTGAACACGTACAATATCAAGAAAGTCATCAAGACAGGTG
TCCGGTACCAAGCTTGTCCGAAATTATATGAAAAATCAGTTAAAACAGCT
GCGGATAAATTACTGAAGACATTGAAACGACAAATCAAACAATTTAAACG
AAAAGATAATCAAGTATGTTTTGGTAATCGAAATGGGAAATATGATTGCG
ATGAATGTTGTAAACCTTCAGTTAAGAAAAACGTGAGTGGGTTTTGTCAA
TTCTGTGTTTGTGTCAATGATGTTTCATTTATTGGTGAGCAAATTTCTAT
AGCTTCAAGTAGCACCAAATCTTCCGAGACTGAGAGTATTGTTACTGCAA
CAACTTCCTCAAAAGATACAGATGTTCATACAACAACTAATACTCCAGCA
AAAATGACCACACCTCAAACTTCAGATCATTCTTCTCAAGAAGAGAACAT
CTCTGGTGAAAACTCGGCAACATTGATAGCATCAGAAGCAGAATCAACTC
CACATGCTTCAATTGGCAGTAACAATGAACGTTACAGAAGACGACGTTCT
ACAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060502-exon-scaffold_343-1575043694:153123..153757 | TCONS_00060502-exon-scaffold_343-1575043694:153123..153757 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1575043694:150181..152582 | TCONS_00060502-exon-scaffold_343-1575043694:150181..152582 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1575043694:149471..149636 | TCONS_00060502-exon-scaffold_343-1575043694:149471..149636 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1575043694:147260..148588 | TCONS_00060502-exon-scaffold_343-1575043694:147260..148588 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1510915933:153123..153757 | TCONS_00060502-exon-scaffold_343-1510915933:153123..153757 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1510915933:150181..152582 | TCONS_00060502-exon-scaffold_343-1510915933:150181..152582 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1510915933:149471..149636 | TCONS_00060502-exon-scaffold_343-1510915933:149471..149636 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1510915933:147260..148588 | TCONS_00060502-exon-scaffold_343-1510915933:147260..148588 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1491911889:153123..153757 | TCONS_00060502-exon-scaffold_343-1491911889:153123..153757 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1491911889:150181..152582 | TCONS_00060502-exon-scaffold_343-1491911889:150181..152582 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1491911889:149471..149636 | TCONS_00060502-exon-scaffold_343-1491911889:149471..149636 | Clytia hemisphaerica | exon |
| TCONS_00060502-exon-scaffold_343-1491911889:147260..148588 | TCONS_00060502-exon-scaffold_343-1491911889:147260..148588 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_343 | supercontig | scaffold_343:147260..153757 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR029034 | Cystine-knot_cytokine |
Blast
The following BLAST results are available for this feature:
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