TCONS_00051427 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051427
Unique NameTCONS_00051427
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1760

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051427 ID=TCONS_00051427|Name=TCONS_00051427|organism=Clytia hemisphaerica|type=transcript|length=1760bp
gtttttgccgtttttgcaaaaTAGGCCCTGGGGAAAAGAAAGAAATCGGG
TGAAAAGGAGGCCGATTCGTGAGATTTTTGGGCGTTATAATTATCTCGGG
TGGCAATTGTCCTATCACGTTGAAAGATATCACCGGGTTGGTGATAAACA
ACATAGCAacgattttctcaaaatgcaGATAAATGCTAAAAGAAAGACTT
TTCAAAATTGACGTCAGTTGAAAAacttatttgacgtcaaataaaaaaat
gcttcatagaaaaaagaaaaactgccAAGAAAAATTATCGTACTTTGAAC
CACCTTTGAGAATAGACGCTCGAAGGATTTTCTCGCTTTTTCGTGAGAAA
TAGTAGTATCGATTTGTTTATATTGATCTTTAACGATTGATATTAATTGT
TATAATAATGAGTGGTATAGCACACGAGTGTTTACAGCATGGTTTTGTTC
TGGGACGGAGCCTAGGCGAGGGAGGATACGGGCAAGTAAAGCAAGCGTCT
TACGTGAACTTTAACTGCCTCAATGATCCTCTCGCCAAGAGACTCCGCTC
CTTAGGACACAGTGACCAAGTTGCtatcaaaataatgaagaaaGCAAACT
GCTCTCAAACCTTTGAAAGGGAAGTGAGTTGCATGCTAAAACTGACTGGC
TGTCGGAACGTTGTCCAGTTATTCAGATACTTCACCGGAGAAAACCATGT
TTACTTGGTGATCGAACTTTGTACTGGAGGTGACTTGATCACACATTTCA
CCAACAGCCAGAAAATTAacgtaaagaaaatttttcaacagaTTGCTGAT
GGCGTGCAGCAAATGCACGCAAAGGGCATCGCCCACCGAGACTTGAAACC
AGAAAACGTCTTGATTGACCGAAATGGTATCGCTAAGATCTCAGACTTTG
GTACTACAATCATGCCATCATCTCCGGACAACCTTTGTAATTCCTATTGT
GGAACACCGGAATATATGGCACCAGAGGTCCTGCGTGGAGTTAAGCTCAT
CAGTTACAAACCGTACAATCCTTTCAAGGCCGATATGTGGAGTTTAGGTG
CTATCCTGTATTCCTTTCTTACTGGAGAGTTCCTTCCACAAGTTGGTtct
tggaaagaaaatttgtccGTCTCTAATGAATGTCTTGATCTCTTGGCCAA
GCTCTTGAGTATCAAACCATCGTTGAGACCAACCATTGGTGACATTCAAA
GACACCCCTGGCTTTCGGCTTCTCATAAGGAACCCGCAATCAAACAAATA
GAGTTGATCAACAATATGATCAAAGAATTTGATTGTTTGGTGGATAGAAA
AAAGGCTCTTAAAGAAGAGTTAACCGaagctgaaaataaaaataaaatcc
ttAAATTGAAACTTGGCATCAGTGAAAAGCAACCATCTCGCTACAAAGTC
ATCGTTCAACAAGATCTAGACGAAAAGATACCGACCACTGCCCAAGAAGC
TAGCGacgaaatggccaaaatgaTGAACAATCTCGCCCATAATATCAAGA
GAGCAAATATCTtattaaaaagacaaaaagcgGATTTGAAAAAACTGAAC
GACAAAAATGTACTTCtcgaacaaaatttttttgagaagatACTGAGAAA
CAACGCCGCTTCAAATCCTCAATTCCCAAATGGGCATCATTTTCCATCCA
CGGAATTATGGGAATGAAAACctccaaaaaatattcaaatttgtaaatag
ttttttttaaatctatattaattttgtaaatagttttattttatctttac
TTATGGTGGc
Run BLAST on NCBI

transcript from alignment at scaffold_201:572788..582971-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051427 ID=TCONS_00051427|Name=TCONS_00051427|organism=Clytia hemisphaerica|type=transcript|length=10184bp|location=Sequence derived from alignment at scaffold_201:572788..582971- (Clytia hemisphaerica)
GTTTTTGCCGTTTTTGCAAAATAGGCCCTGGGGAAAAGAAAGAAATCGGG
TGAAAAGGAGGCCGATTCGTGAGATTTTTGGGCGTTATAATTATCTCGGG
TGGCAATTGTCCTATCACGTTGAAAGATATCACCGGGTTGGTGATAAACA
ACATAGCAACGATTTTCTCAAAATGCAGATAAATGCTAAAAGAAAGACTT
TTCAAAATTGACGTCAGTTGAAAAACTTATTTGACGTCAAATAAAAAAAT
GCTTCATAGAAAAAAGAAAAACTGCCAAGAAAAATTATCGTACTTTGAAC
CACCTTTGAGAATAGACGCTCGAAGGATTTTCTCGCTTTTTCGTGAGAAA
TAGTAGTATCGATTTGTTTATATTGATCTTTAACGATTGATATTAATTGT
TATAATAATGAGTGGTATAGCACACGAGTGTTTACAGCATGGTTTTGTTC
TGGGACGGAGCCTAGGCGAGGGAGGATACGGGCAAGTAAAGCAAGCGTCT
TACGTGAACTTTAACTGCCTCAATGATCCTCTCGCCAAGAGACTCCGCTC
CTTAGGACACAGTGACCAAGTAAGTTATTAATTGCTCAACTTTCATTGAT
TTATATTCAATACGTTTGTTGCTTTTCCTTCTTTCCTTAAAATTTCTAGC
TAGACTCTAATAGACGCTAGATTCTACTGCCCAGACAATCATCACGCCAA
AAAGCTCAGATTATAGTATAGGTTTTGAATAGTAAAACAAATATTGTTGA
TAACGTCTTTAAATAACCGGGTTATTGATTATTCGTTGGTTTTGCGAGTG
CAATGTGTTTCTTCTTAATAATTTCATAATTTTTTTCCCATTTAAAGGTT
GCTATCAAAATAATGAAGAAAGCAAACTGCTCTCAAACCTTTGAAAGGGA
AGTGAGTTGCATGCTAAAACTGACTGGCTGTCGGAACGTTGTCCAGTTAT
TCAGATACTTCACCGGAGAAAACCATGTTTACTTGGTGATCGAACTTTGT
ACTGGAGGTGACTTGATCACACATTTCACCAACAGCCAGAAAATTAACGT
AAAGAAAATTTTTCAACAGATTGCTGATGGCGTGCAGCAAATGCACGCAA
AGGGCATCGCCCACCGGTAAGTTTAAGAACCTATTGCTGGTGATGTCTGC
CTGTTCGTCTTTCGATGTGGTGACACTCAAATCAAGTCATATTTTTGCAC
TTGGTCATAGCACCCTGAACTGATCATCCTAGATGACTGTATACAGTATG
TATCATAGGTTTCAATACGATGACACGGAGTCGATTTGAACGGTTTTGGG
GTTTTTCAAAACTTTCATGGAGCATTGTTAAAAAGAAGAATTTTTTACAA
ATTAAATCTATTCATTTCATGTTTTTCAGAGACTTGAAACCAGAAAACGT
CTTGATGGACCGAAATGGTATCGCTAAGATCTCAGGTACGTTTTCCATTC
TAAAGAAATATCGGATCGTTTCTGAATGCCTTTTGGACAATTCTCTCTGT
AAATTGATAATTAGAAAATAGCATGTAACAGAGACACGATTCCTATAAAT
TAAGTCAATTTGAACGAATTCCTTGTGTGATGATTTGAAACTTTAAAATC
GTATTTTTCAGACTTTGGTACTACAATCATGCCATCATCTCCGCACAACC
TTTGTAATTCCTATTGTGGAACACCAGAATATATGGCACCAGAGGTCTTG
CGTGGAGTTAAGCTCGTCAGTTACAAACCGTACAACCCGTTCGAGGCGTG
GAGTTTGTAAGTCGATCTATTTAATACATTTGTTGTGCGCAGATTTGTAA
TACTTGCGCAGATTTGTAATACCTGTGCAGATTTGTAATACTTTCTGCGC
AGATTTGTAATACCTGCGCAGATTTGTAATAAACTTTGCGCAAATTTGTA
ATACTTAAGCTGCGCAGAAATGTAATACTTCTCTGCGCAGATTTGTAATT
TGGAATTGATATTTTCATTGGTAACCAAGTTCTATTCATCGAACAAAATG
CATTAAAAAAGACTTAGAAAATAATACCCAGATAAAGTTGTGATTATTGA
GCACATCGAATAAATAATCAATTAATATTTCTTTTCTAAGCAGTGCTTTT
ATAAGAAATTTATCTGGTAATATAGAAATTGTTTATGAGAATAGCGCGGA
CATAACTTTTTATAAGAACTGCTTTTATAAGAAACTAATTAATAACTCGT
AAAATAAAAATTATTTCTTGTCGGTAACTATTTATTTCGAAGTAAACAAG
GTGCGAAGAATAACATGAACATGTACATTTTTTATAAGAACTGCTTTTAT
AAGAAACTAATTTCCTTTGGATCAAAAGATATTGATTAGTTTCTTATAAA
GTTGATACTTATAAGAAAAATGAAAATACTTAAAATAAGCAAATCCCATA
TTTGTATTGAAAGAACCAAGCGCCGAAAGCCAATTTCCATTAGATTAAAA
GATATTGTTTCGTTTCTTATAAAGTTGATGCTTATAATAAAAATGAAAAT
ATTAAAATTATTCCCAATCACATGTTTGTATTGAAAGAACCAACTGCCAA
AAGCCAATTTTTATTAGATTAAAATATATTGATTCGTTTGTTATAAAGTT
AATGTTCATACAAAAGATCTACAACCTTTGTGTGATTTTCTGATTTTTTT
CTGAGTCTTTTTTTCGAAACTTTTCTTCGTAAGAAACATATGCCCTCGAA
GTAAAAATCTAAATTCCAAATTACAAATCTGCGCAGAGAAGTATTACATT
TCTGCGCAGCTCAAGTATTACAAATTTGCGCAGGTATTACAAATCTGCGC
AAGTATTACAAATCTGCGCAGAGAAGTATTACATTTCTGCGCAGCTCAAG
TATTACAAATTTGCGCAGGTATTACAAATCTGCGCAAGTATTACAAATCT
GCGCACAACACATTTACAATTTTATTCGAAAATTATAGATAGGCCAACTT
ATGAGACTTGCCTCGGCGAAATGTTTTATGTTTTCTAAATCCCATCCTTA
AAAGAAGATAATTACAAAGGAATGATCCAAAGTAGACCCTAACACATTCT
TTTTAGGGCAAAATAGGCTATATTGTAAACAAAAAATTTTCCCAACAGCG
AAACTTCCGAATTTGGAGCTGCGAGCCGCAAAATAAAATTCTGCAAAAAT
TTCTTCCATTAAAAGTAGCTCAGTTTTTCTCTCCGTATAACTATTTTTCA
TNAGTTTTTTGTATGAAGATAAAGGGTGATAATTTTTTTTGTATGTTTTA
TTCTCTGTATAAAATTTTATACTTTTCTCTCAATTTTAGAGGCGCTATCC
TGTATTCCTTTCTTACTGGAGAGTTCCTTCCACAAGTTGGTTCTTGGAAA
GAAAATTTGTCCGTCTCTAATGGTAAGTTTAAAGGTTTTTCGTTCAAGTG
GATGACTTCTACAATTCCTGGAGAATATTTGGGGGCCAGTACTGCCAAAC
CCTGAGCTATAGGAGGAAAGTCTGGCAGTATTAGCACTTTTAACAAAAAA
CTGGATTTTAGCGAATTTTTGTTGTTGCTGACCCAAAAATGGAGTCGGAA
AAATATAGAAAGATAAAGCCAATTTTATTTGCAGTTGAAAAATTGTGACA
TTCTAAAGATTTTCCTGGTCCATTTTTTGCTTGCGATTAAAATGACTAAG
TATAGAGTCCACTTAGATTGAACTTTATTCTTTATATTCATTGTTTAGAA
TGTCTTGATCTCTTGACCAAGCTCTTGAGTATCAAATCATCGTTGAGACC
AACCATTGGTGACATTCAAAGACACCCCTGGCTTTCGGCTTCTCATAAGG
TATGGTGATCTTCTAATAAAAATTTATCTTCATTGAAATATTTTCGAAAT
TACAAACTCTGCATTGATGATCTTATAGAAAATTGTTCCAACTGGCTGAT
TTATTTATTTGTAAAAACACTTCATTTAACCTACGAATGGATAACAATTT
TCGCCAAATAACCCTTTTTTATCTGAATGATTTAACCATAACGTAAAATC
ATTAAATCATTAATATTGAAACTTCTTTTCTAGANTTATCTGAATGATTT
AACCATAACGTAAAATCATTAAATCATTAACATTGAAACTTCTTTTCTAG
GAACCCGCAATCAAACAAATAGAGTTGATCAACAATATGATCAAAGAATT
TGATTGTTTGGTGGATAGAAAAAAGGCTCTTAAAGAAGAGTTAGCCGAAG
CTGAAAATAAAAATAAAATCCTTAAATTGAAACTTGGCATCAGTGAAAAG
GTGAGAAAATGTCATTTTTTTCGCGATATCTCAGTCTGTTAAAATGAACG
AGAGCAAAAAAATACAAAAAGGTTTTTCCCAGATTCCCATATACTTTTAG
TCCAAGTGTCTTTTATAGTATGTTGTTACAGTAGCGTAGACAGGAGGGGC
GCAAAATTTGTGTAGGAGAGCAAACTTTCATGACACTGTGATTATCTATT
CATAATGTAAAAAGATAATTAGAGTGTCATTAAAATCTGCTCTCCTACAT
AAATTTTGCGCCCCTCCTGTCTACGCTACTGTTTGTAAGCCCTCGTATTA
TTTCAAAGCGATTTACGCTAGACATAATCGAATAATTTACGCCAGATTAA
GTTTCACATTTTCGAAAACGAAAATAAATTCACGCGAGATTTTCGAAATT
GTGCTTTCCGACGCAAAGCTTATAATTTATTTCTAACAATGTTCTAGCAA
CCATCTCGCTACAAAGTCATCGTTCAACAAGATCTAGACAAAAAGGTGAG
TTTACTTTCTTAAATGTTAGCACTTTTCGCTTTTCAGGAGGAATTAAGTT
TTTAGTGTAATTTCCTGAGAAACTGCCGTATTTTTTTCCTACAGTAAAAA
CAACTGATAATTTATTTTCTCATAGATGCCGGCCACTGCCAAAGAAGCTA
GCGACGAAATGGCCAAAATGATGAACAATCTCGCCCATAATATCAAGAGA
GCAAATATCTTATTAAAAAGACAAAAAGCAGATTTGCAGAAAATCAACAG
CGAAAATGTTCTTCTCGGACACAAATTTTTTGAGAAGATACTAAGAAACA
ACGCCGCTTCAAATCCTCAATTCCCAAATGGGCATCATTTTCCATCCACG
GAATTATGGGAATGAAAACCTCCAAAAAATATTCAAATTTGTAAATAGTT
TTTTTTAAATCTATATTAATTTTGTAAATTGTTTTATTTTATCTTTACTT
ATTATGGTGTCACTTCAAAAAAATATAAATCCCCACAAAAACTCTTCAAT
ACGCTAAACAAAATAATTTTTTAATTTCATTCGTTCCGCATTTAAGCTGG
TTGATGTTTAATTTAGAAAGAAATGACTCAGTATTAAAATTCTTAGAACC
AAGAAACTGTAATAGACCCGGTGGGACAAAGTCAAAGTTTCTTCCCCGGT
GGAAAGAAATACCCTAAAATTTCAGCCCAACCCAGAAACTGACTTTCATT
TAATCCCAATTTTAAATTCAATGGAGAAAATTGTCTTCCAAATCCATCCA
ACTGGATTTTTTTAGCTGGGAACAATATACAGTTTATATTTCCTTTTTGA
TAAAAGTTTTCAACACCAATCTTGGAAAAAAGTTCCACCGGGCGGCCTGT
GAGAAAGGGGTGTCTTAGAGGTCGTAATTTCTCTGTTCATTGTCCTCTCC
ATCTCGCCCTCCATAAGATACACCCCTGTGTTATAGACCCGCTGGAACCC
CCACCCACTGGAAAATTTAGTCTCGGGTTGGAAAAAAACCTGTAATTTCA
ACCCCACTGGGAAATCCACTTTTAGTTCATCCCTGCTCGAAATTCAATGT
TGGAATCCAAAACCATCTGCACTGGATTTTTTAAACATTTGAACGATAAA
ATTTCTATTCCCACTGAAGAAAAAAGTTCCACCGGGGCTGTGAGACAAGG
GTGTTAAGATAAATTTTTTCTCTCGAGGGTTTTAAGGCAGGCTCACACTT
TCACAAAAATGCCATTTTTTCCTTCAAGGAACACATTAAGTTTACGTTGA
ATTTGGATCCGACCTTGAGAATACTTTAAGAATATCAATTAAGATTGGAA
TTGCCGATCTTATAAAAAAGCTAGCGAGGGATATTTGCGACTAAGATAAA
GAGCAAAAACATTTGAATATCAGAATGCCGAACGAGAAATGAAAGAAAGG
CGTCACTTTTTTCAATATGTTAAAAATTGACGTCAGTTGAAAAATTTATT
TGACGTCAAATAAAAAAATTCTTAATAGAAAGAAAACTGCCAAGAAAAAT
TATCGTACTTCAACCCACCTTCGAGAATAGACGTTCGAAGGATTTTTCTC
GCTTTTTCGTGAGAAATAGTAGTATCGATTTGTTCATATCAATCTTTAAC
GATTGATATTAATTGTTATAATAATGAGTGGTATAGCACACGAGTGTTTA
CAGCATGGTTTTGTTCTGGGACGGAGTCTAGGCGAGGGAGGATACGGGCA
AGTCAAACAAGCGTCGTACGTGAACTTTAACTGCCCCAATGATACTCTCG
CCAAGAGGCTCCGCTCCTTTGGACACAGTGACCAAGTAAGTTATTAATTG
CTCAACTTTCATTGCTTTATATTCAATACGTTCGTTGCTTTTCTTTCTTT
CCCTAATATTTTTAGCTAGACTATAATAGACGCTAGATTCTACTGCCCAG
ACAATCATCAAGCCAAAAAGCTGAGATTATAGTATAAGTTTTGAATAGTA
AAACAAAGATTGTTGATAACGTCTTTAAATAAACGGGTTATTGATTATTC
GTTGGTTTTGCAAGTGCAATGTGTTTCTTCTTAATAATTTCATAATTTTT
TTTCCCATTTAAAGGTTGCTATCAAAATAATGAAGAAAGCAAGCTGCTCT
CAAACCTTCGAAAGGGAAGTGAGTTGCATGCTAAAACTGACTGGCTGTCG
GAACGTTGTCCAGTTATTCAGATACTTCACCGGAGAAAACCATGTTTACT
TGGTGATCGAACTTTGTACTGGAGGTGACTTGATCACACATTTCACCAAC
AGCCAGAAAATTAACGTAAAGAAAATTTTTCAACAGATTGCTGATGGCGT
GCAGCAAATGCACGTAAAGGGCATCGCCCACCGGTAAGTTTAAGAACCTA
TTGATGGTGATGTCTGCCTATTTGTCTTTCGATGTGGTGACACTCAAATC
AAGTCATATTTTTGCACTTGGTCATAGCACCCTTAGGTTTCAATACGATG
ACACGGAGCCGATTTGAACAGTTTTGGGGTTTTTCAAAATGTTCATGGAG
CATTGTTAAAAAGAAGAATTTTATACAAATTAAACCTATTCATTTCATGT
TTTTCAGAGACTTGAAACCAGAAAACGTCTTGATTGACCGAAATGGTATC
GCTAAGATCTCAGGTATGTTTTCCATTCATTTTAAAGCAATTCAGGATCG
TCTCTAAATGCCTTTGTACAATCCCCCCTGTAAATTAAATAAATATGAAA
TAGCGTGTAACAGAGGCAGGCACCGATTCCTATGAAATAGGTCAATTGAA
CCAATTCCGTGTGTGATGATTAAAAACTTTTTAATCGTATTTTTTCAGAC
TTTGGTACTACAATCATGCCATCATCTCCGGACAACCTTTGTAATTCCTA
TTGTGGAACACCGGAATATATGGCACCAGAGGTCCTGCGTGGAGTTAAGC
TCATCAGTTACAAACCGTACAATCCTTTCAAGGCCGATATGTGGAGTTTG
TAAGTCAATCTGTTTTAATACATTGTCAATTTTATTCGAAAAGCTAACAG
TAGGTCTCTCTGTGTCATTATGAATATGCCAACTTATTACGAGACTTGCC
GCGGTGAAATTTCATCATTTTTTAATTCCACCCTGAAAAGAAAAAAATTA
TAAAGGAATGATCCAAAGTCAGAAAACGCGGGAAAGAGTTAGGGCGTCAG
GGCTGTTAACGGGAAGAATAGCGGTGGTAGAGTTTTGGAAGACTGTAAAC
ATCTCCGCCACTGCTTACTCCACCCGAATTTATCACGCCTCTCCTAAACT
ATTCCCTTTTTTTAGTGATCTTGTGTAGACGATAGGATCGTCTACCCTAA
CATATTCATTTTTTCAAAAATTTAATGAATCTGCGGCCTTATCAGATATT
TTCTGAACCTGAAAAAAGAAGTCATNCATATTCATTTTTTCAAAAATTTA
ATGAATCTGCGGCCTTATCAGATATTTTCCGAACCTGAAAAAAGAAGTCA
TTTGTAGCCTGAATGATGAGTCAAATTGGGGTCTATAGAATATATCTTAA
ATTGGTTGTAGCAGGTCACTTTTTTTTAAAGATTTTTTCTCTGTAAAAAA
TTCATTTTTTTCTCTCAATTTTAGAGGTGCTATCCTGTATTCCTTTCTTA
CTGGAGAGTTCCTTCCACAAGTTGGTTCTTGGAAAGAAAATTTGTCCGTC
TCTAATGGTAAGTTTGAAGGTATCGTTCAAGTGGATGATTTCTACAATTC
CTGGAGAAATTTTGAGGCCCAGTACTGACGAACCCTGAACTAGGAGGAAG
CTCTGGCAGTATTAGCACTTTTCAACAAAATAAGAATTTTAGCAACTTTC
TGTTGTCGCTGACCCAAAAAAGGGTATTTTAGTGGCTCCTGCATGCCCTA
ACTCATTTGTACAGTAGTCGAAAAATTGTGACATTCTAAAGATTTTCCTG
GGCCATTTTTTGCTTGCGATGAAAATGACCACTTGGATTGAACTTTATTC
TTTATATTCATTGTTTAGAATGTCTTGATCTCTTGGCCAAGCTCTTGAGT
ATCAAACCATCGTTGAGACCAACCATTGGTGACATTCAAAGACACCCCTG
GCTTTCGGCTTCTCATAAGGTGATTTTCTAAAGTGTGTCCGCAAAAAAGA
ATAAGAATTTATTTTCATCAAAACATTTTGGAAATGACAAACTCTGCATT
GCTGATCTTATAAAAAATTGTTCCAACCGGTTGATTTATTTATTTGTAAA
AACACTTCATTCCACCCACGACTGGATAACAATTTTCGCCAAATACTCCT
TTTTTATCTGAATGATTTAACCATAACGTGAAATCATTAAATCATTAACA
TTGAAACTTCTTTTCTAGGAACCCGCAATCAAACAAATAGAGTTGATCAA
CAATATGATCAAAGAATTTGATTGTTTGGTGGATAGAAAAAAGGCTCTTA
AAGAAGAGTTAACCGAAGCTGAAAATAAAAATAAAATCCTTAAATTGAAA
CTTGGCATCAGTGAAAAGGTGAGAAAATGTCATTTTTTTGGCGATATCTC
AGTCTGTTAAAATGAACGAGAATAAAAAAATACAAAAAGGTTTTTCCCAG
ATTCCCATATATTTTTAGTCCAAGTGTCTTTTATAGTATGTTGTTACAGA
AGCGTAGGCAGAAGGGGCGCAAAATTTGTGTAGGAGAGCAAACTTTCATG
ACACTGTGATTATCTATTCATAATGTAAAAAGATAATCAGAGTGTCATAA
AAATCTGCTCTCCCACATAAATTTTGCGCCCCTCCTGTCTACGCTACTGT
TTGTAAGCCCTCGTATTATTTCAAAGCGATTTGCGCTAGACATAATCGAA
TAATTTTCGCCAGATGAAGTTCACATTTTCGCCTGAGTAAACGAAAATAA
ATTCACGCGAGATTTTCGAAATTGTGCTTTCCGACGCAAAGCTTATAATT
TAATTCTAACTATGTTCTAGCAACCATCTCGCTACAAAGTCATCGTTCAA
CAAGATCTAGACGAAAAGGTGAGTTTACTTTCTTAAATGTTAGCACTTTT
CGCTTTTCAGTAGGAATTGAAGTTTTTAGTGTAATTTCCTAAAAAATTAC
CGTACTTTTTTTTTCTACAGTAAAAACAACTGATAATTTATTTTCTCATA
GATACCGACCACTGCCCAAGAAGCTAGCGACGAAATGGCCAAAATGATGA
ACAATCTCGCCCATAATATCAAGAGAGCAAATATCTTATTAAAAAGACAA
AAAGCGGATTTGAAAAAACTGAACGACAAAAATGTACTTCTCGAACAAAA
TTTTTTTGAGAAGATACTGAGAAACAACGCCGCTTCAAATCCTCAATTCC
CAAATGGGCATCATTTTCCATCCACGGAATTATGGGAATGAAAACCTCCA
AAAAATATTCAAATTTGTAAATAGTTTTTTTTAAATCTATATTAATTTTG
TAAATAGTTTTATTTTATCTTTACTTATGGTGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032586XLOC_032586Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051427-exon-scaffold_201-1575043694:582403..582971TCONS_00051427-exon-scaffold_201-1575043694:582403..582971Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:581856..582124TCONS_00051427-exon-scaffold_201-1575043694:581856..582124Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:575609..575664TCONS_00051427-exon-scaffold_201-1575043694:575609..575664Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:575273..575423TCONS_00051427-exon-scaffold_201-1575043694:575273..575423Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:574565..574647TCONS_00051427-exon-scaffold_201-1575043694:574565..574647Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:574153..574253TCONS_00051427-exon-scaffold_201-1575043694:574153..574253Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:573754..573903TCONS_00051427-exon-scaffold_201-1575043694:573754..573903Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:573254..573301TCONS_00051427-exon-scaffold_201-1575043694:573254..573301Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1575043694:572788..573120TCONS_00051427-exon-scaffold_201-1575043694:572788..573120Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:582403..582971TCONS_00051427-exon-scaffold_201-1510915933:582403..582971Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:581856..582124TCONS_00051427-exon-scaffold_201-1510915933:581856..582124Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:575609..575664TCONS_00051427-exon-scaffold_201-1510915933:575609..575664Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:575273..575423TCONS_00051427-exon-scaffold_201-1510915933:575273..575423Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:574565..574647TCONS_00051427-exon-scaffold_201-1510915933:574565..574647Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:574153..574253TCONS_00051427-exon-scaffold_201-1510915933:574153..574253Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:573754..573903TCONS_00051427-exon-scaffold_201-1510915933:573754..573903Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:573254..573301TCONS_00051427-exon-scaffold_201-1510915933:573254..573301Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1510915933:572788..573120TCONS_00051427-exon-scaffold_201-1510915933:572788..573120Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:582403..582971TCONS_00051427-exon-scaffold_201-1491911889:582403..582971Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:581856..582124TCONS_00051427-exon-scaffold_201-1491911889:581856..582124Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:575609..575664TCONS_00051427-exon-scaffold_201-1491911889:575609..575664Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:575273..575423TCONS_00051427-exon-scaffold_201-1491911889:575273..575423Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:574565..574647TCONS_00051427-exon-scaffold_201-1491911889:574565..574647Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:574153..574253TCONS_00051427-exon-scaffold_201-1491911889:574153..574253Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:573754..573903TCONS_00051427-exon-scaffold_201-1491911889:573754..573903Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:573254..573301TCONS_00051427-exon-scaffold_201-1491911889:573254..573301Clytia hemisphaericaexon
TCONS_00051427-exon-scaffold_201-1491911889:572788..573120TCONS_00051427-exon-scaffold_201-1491911889:572788..573120Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:572788..582971 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.000760726	0	0	0	0.061175	0	0.183289	0	0	0	0.210473	0.0759852	0	0.0695851	0	0.130071	0.183208	0	0.127924	0.345318	0.370217	0	0.000257477	0	0.000304364	0	0	0	0
Blast
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BLAST of TCONS_00051427 vs. Swiss-Prot (Human)
Match: TSSK3 (Testis-specific serine/threonine-protein kinase 3 OS=Homo sapiens GN=TSSK3 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.131e-37
Identity = 90/287 (31.36%), Postives = 153/287 (53.31%), Query Frame = 3 
Query:  432 LQHGFVLGRSLGEGGYGQVKQASYVNFNCLNDPLAKRLRSLGHSDQVAIKIMKKANCSQTF-----EREVSCMLKLTGCRNVVQLFRYF-TGENHVYLVIELCTGGDLITHFTNSQKI---NVKKIFQQIADGVQQMHAKGIAHRDLKPENVLIDRNGIAKISDFG-TTIMPSSPDNLCNSYCGTPEYMAPEVLRGVKLISYKPYNPFKADMWSLGAILYSFLTGEF------LPQV-------GSWKENLSVSNECLDLLAKLLSIKPSLRPTIGDIQRHPWLSAS 1223
            L +G+ LG+++GEG Y +VK+A            +K+     H  +VAIK++ K    + F      RE+  +  L   +N++Q++    + +  + LV+EL  GGD+     N   +     K +F+Q+ + ++  H  G+AHRDLK EN L+    + K++DFG   ++P S   L  ++CG+  Y APEVL+G+      P++  K D+WS+G +LY  L          +P++        S+  +LS+S +C DLL +LL     LRP+I ++  HPWL+++
Sbjct:    6 LSNGYQLGKTIGEGTYSKVKEA-----------FSKK-----HQRKVAIKVIDKMGGPEEFIQRFLPRELQIVRTLDH-KNIIQVYEMLESADGKICLVMELAEGGDVFDCVLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQGFNL-KLTDFGFAKVLPKSHRELSQTFCGSTAYAAPEVLQGI------PHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLWQQQKGVSFPTHLSISADCQDLLKRLLEPDMILRPSIEEVSWHPWLAST 268
The following BLAST results are available for this feature:
BLAST of TCONS_00051427 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSSK31.131e-3731.36Testis-specific serine/threonine-protein kinase 3 ... [more]
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