TCONS_00051104 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051104
Unique NameTCONS_00051104
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1333

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051104 ID=TCONS_00051104|Name=TCONS_00051104|organism=Clytia hemisphaerica|type=transcript|length=1333bp
tttatattgtacaaactacagaccagactgtattaagagaaaatcacaaa
agagtgcttgtttcgagctccaaccatNttgtttcgagctccaaccctaa
ccctaactgataataaccaaattcctagccaatctgatacgtaaccacac
ccatacccaaccctaccaggttgCCTGctggtcctgacactattcccgca
tgccggatccgaaaaatagatacatgtctttcgcttttacgaagaagcct
tcaccatACCAAACACATGTTTTGACCTGAGCAAGAGAAGTGTTTTAGGA
AGCTGCCCTCAGTAGGTTGTGGTGAGCTCAACAGGGTAACATCAATAAGT
GTAAAGTATAAAGTATAAAATATGGGTGGAGAAAAAGACATTCTCATCCC
TCCAGTCAAAGGCTACAGACCACGCTGTTTTTTTGATATCAACATAAACA
ACGTTTCAGTTGGAAGAATAATCTTGGAATTGTTTGCTGATATTTGCCCA
AAGACATGTGAAAATTTCCGCGCTTTATGCACAGGTGAAAAGGGTGATGG
TAAGACAACATTGAAACCTCTGCATTATAAAAGAACAGTCTTTCATCGTA
TCGTAGCTGGCTTCATTATTCAAGGTGGAGACTTCAGTGCAGGTGATGGA
ACTGGAGGGGAATCTATCTACGGAGGAACTTTCAAAGATGAATCCTTTGA
GGTCGAACACAACCAACCTTATCTTTTGTCAATGGCCAACCGTGGCCCAA
ACACTAATGGCTCTCAGTTTTTTATAACTTTGGCACCAGCCCCTCATTTG
GATAAAGTGCACTGCGTGTTTGGACGTGTGCTGTCTGGTCAAGAAATCGT
CCGTGATATGGAGAATCAAAAGGTGAATGACAACCACACTCCATACGCCG
AAATACGTGTCACGCATTGTGGTGAACTAGTGAAGAAATCTAAACAGACC
AATCATGATCATGCAACAACATCGAAGAGAAAATCACGCAAAAGctcatc
atcgtcatcatcatccTCGTCGTCGTCGTCCTCAGAAGAAGAAAGTGATG
CTGAAGTAACCAAGAAAACGAGGaagaaggaaaagaagaaagaaaagaaa
aagaaaaaaaccaagAGGTTAGCAAAAATTCTCATTCATGACGGAGGGTA
ATTccccaaaattgacattttaaccAATTTTATCCGTTTGACATTGAATT
TTATGCTTAGGATATGATTCgaaaaactttaaactgatgCAGACTGGAAT
GTGTAAAAATTCCCACGACCAATCAAAGAAGTCCAAAAGGGCGCGTAACT
CACATGGCTGAGGGAATTCTCCattgtgaagat
Run BLAST on NCBI

transcript from alignment at scaffold_194:402..23492+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051104 ID=TCONS_00051104|Name=TCONS_00051104|organism=Clytia hemisphaerica|type=transcript|length=23091bp|location=Sequence derived from alignment at scaffold_194:402..23492+ (Clytia hemisphaerica)
tttatattgtacaaactacagaccagactgtattaagagaaaatcacaaa
agagtgcttgtttcgagctccaaccatNttgtttcgagctccaaccctaa
ccctaactgataataaccaaattcctagccaatctgatacgtaaccacac
ccatacccaaccctaccaggttgCCTGctggtcctgacactattcccgca
tgccggatccgaaaaatagatacatgtctttcgcttttacgaagaagcct
tcaccatACCAAACACATGTTTTGACCTGAGCAAGAGAAGTGTTTTAGGA
AGCTGCCCTCAGTAGGTTGTGGTGAGCTCAACAGGGTAACATCAATAAGT
GTAAAGTATAAAGTATAAAATATGGGTGGAGAAAAAGACATTCTCATCCC
TCCAGTCAAAGGCTACAGACCACGCTGTTTTTTTGATATCAACATAAACA
ACGTTTCNAAAATATGGGTGGAGAAAAAGACATTCTCATCCCTCCAGTCA
AAGGCTACAGACCACGCTGTTTTTTTGATATCAACATAAACAACGTTTCA
GGTAGATATAATTTATCTACAATAATAtctattatgtttaaaactcagag
tttcatagTGCTTCAGcaccaatcttcagtgaaatgagACACGTTAGAAA
ATAGAATacagtatagaccttttttcaaagaggccaccctgttgtataat
tatgtagtccagcagaaaaacaatgataaggcggatctctaaaaattgtt
tggttcctgCCCGTCatccgaccgaccctgatttttaCTCTGAAGTTAGA
GTCGGAGAGTCGGAGACCCGCTTTTGCCACTTCTGGATTCCTAATTGTCA
ACCTCTGGCTCTGCACGCtcagtgtttacaagttttcaaatcgaaatagC
GGAAAGTGAAccaaaaaccagtttatccatgaTTCCCCGATTTTTTAACT
GGATTTCATAATTCGGACTTTCGTGGAAGCAGACCACGCTTGCGAAGCAT
CACTTTCTAAAAAACAAGATGTTGAATGATGATTATGGGGCTCACAATGC
AGGTACCTTCAATGAACAAAGATGGTATgtatgtacaaaaaaatatattc
gaccgaccgaccgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNaaatttcatgtTTTAACTGTCTATCATTAGTCTGCAATTCATAAA
TTTTGTGtcaatttttcctcgttttggcaatttttagcaaaaaagtgctT
CAGTTTTCGGTGggtggatggaaaggcgaaaaggtctatgaccagccagg
tcattcatttgagggctatgcatgttagcctccaggACACTGTCAACAAG
AAGGTACAAATCATGCACCATGCCAAAAAAGGCTTAAAATAAGGTTTTTG
TAATAACTTGCCCAAATTACATAAAAAATTAGGGAAAATCTCAGAAAACC
TCTATATTAACATTAGAAAGGATAAGAGATGGTTTAAAATCACTCCAGGG
GGTTAAATGCCCCAAATATGGGTAAATgccacatttttggtacacctgtc
ccttccgttacgctttTGACTTTTACTGCTCATATCTTGAAAACTAGCAT
TAAACTTGCAAAACTTCCAATTGATTATTNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNCCCATATGGCTTATTTGTCGtccagaaaaaaagattttccta
aAACGGGCCATTTAAGCTTAGTCTCTACCGAACCTTTAAACTAAAGCTGA
ATGGTTTTTTAACTCTCAAATAGTATAGTAAAATGGCACACTCTTTACGT
TTTTGGGTGCTAAAATAGGACAATAAAGTCCTTAATTTTAACCttgatat
tttacaaaaaggaCAATTTAGTGTCAAATCAAAGAAATATGGTTTCTATC
CATAGGTGATTTTGACCCTAATATGATATAGAATTTTATTTCTATACTgc
caggctagctctaaagctctaaaacagcataaaaccagaatatgattctt
caaaacGATTGAATGTGCTTTGTTTGATTTATGGTTTAGGTCTAAACACT
CCACTAacctgcacacatcccctctgttatgttttgatatagaggATGCA
TATTGTGTATACGATTTTATTAATAGCAGTGAACGAAGGTATAAATTGAC
CATCATCACTGAGACCATCAACACAATGTAAACGATGCTCTCATTGAACA
GCTCATCCTTCCTGAATCTCTGGTGACATAGATCTTACTCTTTGAAGTGA
TTCTTCACGTGACCCTCAAGACGACACGAGAAAACTTTGGGACATTTCTC
ACATTTGAAAACCTTTGGTGTATTTTGTTTTATACCAGGGCAAGTTTTTA
CATGACGTGCAATTTTTGATTGGTGATTGAATGTTTTATTGCATTTACGA
CATACAAATACaccatctttcaaaaaatagctTTTTAGTTCTTGGACAGC
TGGCTTAAGGCATTTTTTTGTGTGTCTCGCAAGTTGCATTGGCCATTTGA
AAATACTTCTGCACCCTATATTTTTACATTTGTATTGTTTGATTTCTNTA
GTTCTTGGACAGCTGGCTTAAGGCATTTTTTTGTGTGTCTCGCAAGTTGC
ATTGGCCATTTGAAAATACTTCTGCACCCtatatttttacatttgaattG
TTTGATTTCTAAAGACAAAAAATAATTAACTAAATACAAGTCTGGTCAAT
ATAcagggatcgaattagcgtatcgcatttcgcaattcgcgatgcctttt
tggattacttacaagctaaaaattgaaaattgatctaTTTTAGGATacaa
aatcatgcttatcaaaaaattgcaatgcactttctatcccttatttcgat
gcctgATATATCTTACGGTGAACAACTTTCTTTGAGCTCATGGTTTTCTC
AAAAACTTCTGACATATTTGAAATCTCAGTACGACCAGTACAGAAAATCC
ATATAAATGGGCCCTGAATCGCAGACCTGTACAAAACCGTTGGTAGTATA
TATTATCTACACGAAGCACAAATCCGTTAGAAGCCTaaagacgggggtaa
ctctcggacgggaattttatacacaataTGCATCCTCTATATTAAAACAT
AACAGAGGGGACGTGTGCAGGCTAGTGTAGTTTTTAGACTTAAACCAAAG
ATCAAACAAAGCACATTCAAAACTCAAAGATAAGNGTTTCTATCCATAGG
TGATTTTGACCCTAATATGATATAGAATTTTATTTCTATACTgccaggct
agctctaaagctctaaaacagcataataacatgaaaaccagaatatgatt
cttcaaaacGATTGAATGTGCTTTGTTTGATTTATGGTTTAGGTCTAAAC
ACTCCACTAACCTACACACATCCCCTCtgttatgttttgatatagaggAT
GCATATTGTGTATACGATTTTATTAATAGCAGTGAACGAAGGTATAAATT
GACCATCATCACTGAGACCATCAACACAATGTAAACGATGCTCTCATTGA
ACAGCTCATCCTTCCTGAATCTCTGGTGACATAGATCTTACCCTTTGAAG
TGATTCTTCACGTGACCCTCAAGACGACACGAGAAAACTTTGGGACATTT
CTCACATTTGAAAACCTTTGGTGTATTTTGTTTGATACCAGGGCAAGTTT
TTACATGACGTGCAATGTTTGATTGGTGATTGAATGTTTTATTGCATTTA
CGACATACAAATACaccatctttcaaaaaatagctTTTTAGTTCTTGGAC
AGCTGGCTTAAGGCATTTTTTTGTGTGTCTCGCAAGTTGCATTGGCCATT
TGAAAATACTTCTGCACCCtatatttttacatttgaattGTTTGATTTCT
TCTATTTCATTCATTATTTATATCTAAAGACAAAAAATAATTAACTAAAT
ACAAGTCTGGTCAATATAcagggatcgaattagcgtatcgcatttcgcaa
ttcgcgatgcgtttttggattacttacaagctaaaaattgaaaattgatc
taTTTTAGGATacaaaatcatgcttatcaaaaaattgcaatgcactttct
atcccttatttcgatgcctgATATATCTTACACGGTGAACAACTTTCTTT
GAGCTCATGGTTTTCTCAAAAACTTCTGACATATTTGAAATCTCAGTACG
ACCAGTACAGAAAATCCATATAAATGGGCCCTGAATCGCAGACCTGTACA
AAACCGTTGGTAGTATATATTATCTACACAAAGCACAAATCCGTTAGAAG
CCTaaagacgggggtaactctcgggcgggaattttatacacaataTGCAT
cctctatatcaaaacataacaGAGGGGACGTGTGCAGGCTAGTGTAGTTT
TTAGACTTAAACCAAAGATCAAACAAAGCACATTCAAAACTCAAAGATAA
GTAATTCTTCTCTCTGTAGTTCTACAATCGTTGTTTATGAAAACATGCAA
gtgactttttttttcaagctgGCTTCAAGCCAAAATCATGAGCTTCTGAA
AAATCTACCACTACAAGTAGTTTTTCTTCGCTAAAATAGTAGATCAAACA
AAGCATATTTTCAATTCGAAATTTGCTTGCAGACAAAAGTATCCAGAAGT
ATCCGGTGATTAGTGGAGTGCTTTTTATCTGATTTTACCTTCTCATTATA
TGCTATTTTACCTCCGTGCTCTGTGCTGGACATTATTATCGTTCTTTTCT
AGTTCTATTTTCATCTGACtatcatcatcaggtaggtccattcagcatgt
gaCTTGTTTCATGGCAATTTAGACCTCACTTTCTATACTGTCAATCTGGC
TAAATTAAGTGATGCTGATTCAAAATCTTTAATCAATTTCTAGTTGGAAG
AATAATCTTGGAATTGTTTGCTGATATTTGCCCAAAGACATGTGAAAATT
TCCGCGCTTTATGCACAGGTATGCTGTTTACTTGTATTCAATATGAAGAA
ATCTGATTCGTAATAATAAAAGATTTTCAGATTTGAGTGTTCTTCTCAAT
CGATTCTTAGGAATTTCGTTTGTGACTTCACAATGTTCCCATACCCACAC
ACCCCATCTTAACCAATACCTTTTaatcaaaagctcaaaattggtCTCTT
GCTTACTGTatttgaattctatcaaaagttcaAAACTCTTATGTTATGTA
TTCTTTAGGACAGCCTTAATCAAATtatattgaattaaaaaaagaaagaa
taaatCAAATCTACTAATATTAATTCCAGGTGAAAAGGGTGATGGTAAGA
CAACATTGAAACCTCTGCATTATAAAAGAACAGTCTTTCATCGTATCGTA
GCTGGCTTCATTATTCAAGGTGGAGACTTCAGTGCAGGTAAGTCtttcat
atttttctgaaacaatcgtaaatttgttactttttccTAGCTTATGAAAT
CTATTGACTATTTTATCTGATATAACCAAATAAATTGTCCAACACTATAT
TATCTTATGCTAAATTAACAGAACTAGAGATGAAATAGCCCACTCGACAT
TTTTCCATAATGAAATTCTGTCTCTCATTCTAGTTTGAAAATGTGAACCA
GTGAAATTCAGTTTTTATAATTCTAAAGTCTGTCTANNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Ngttgctttagcttgaaaattatgatttttgggtcggacatgaagctatt
tgggtcggCCAATGTCCGaagtccgaccgttatttcgagccctgtaaTGA
TCTAATTTTAGCATtagtaactttgcagtgaatcactattcaaaatttga
gaccaaaaggactattttataaaaagttattcaagaaaactATTTTGTAG
GTTTTACTGGGTTTTAAGAAgtaaatcgctaaaattgcattttttcatca
agcaataaaaaatttcttagcagcttttacaaaatacaatacccagggaa
gaaattcataggtagcctagactcaccagaaaaagtttcagcccttactg
ttttctctgtcgtaggttttaaggggtatccactggtagtaACTTTTGTA
TTTTATCCTTTGTGTTGAGTGACgacttaattttttcaatccACAAAGCC
TCAAAGGCATTAAATTAAACATTAAACATGTtctattattatatacctgt
aagCAAAGaaagccattgaataattccggATATACCAAGGCTATCATAGG
GGCACCCCCAGGGACTGGCGTAACATGTGAATTAGTCTTTTTTCTGCCGT
GAATATGTAAATTGGATTTTTGCCGCgtgtgaatacgtgaattgcgatat
cagcgtgaacgtgaaaataagatttttcccTGCGTGAATTTGTGAATCCA
GAATTTTAGCGTGAAAGGTGAAAAGTAATTTATCTTCTAGAACAcaagaa
aatttgataaacatacattctaaatcttttaaatttttaaggtGTAGTAT
TGTCATTTAATATTTTTGTGCGAACACTGCATCCAATGAGAGCGTTTTTA
GTCCAAACAAATGAGAAAATCTTAATTCTAAGTGATCTTAGAATGCTACC
AGATTTATGCAGGACTCACGCCACCCTTGGAGGGGGGCAAAGGGCCATTG
AACCTCActttttccaaagaaaaaagtatttctatttcCCATGATTCATT
TCTGAATATTGCCTCAAAGTCTATCAAATTTAAGCaatttaaaatcgaaa
aattttcccgtcggcgcaaaccatggttgcgcctctaAGTCACTATATGT
ATTAATTTGGAGGCAGCAGGGGtttcgtatttttttataatttgcaaAGC
AGTAAGTAGTTTTGTAATTTATCTTCAATGTGAAAGAGTGCTAAGGCTTA
TTTGGAGTTTCATTTGCTTCCCCCTTAACTGACAAACAGTGCCATTGTTT
ACACCAGCATACACGCCCGAGGGATGGTAGTAGCTTTGACGTGATGTCAG
GACCAAAATTTCGCTCAATGAAAACCAAAATAGTTAAACTGCCTTAAAAG
GTCGAAAATGGCGAGAATAATAAAGTCATAAAACTGTAATGCAACTTCAC
GCTGGTGAAAATGATAGGTATAAGAATTGGTATAACGGTTAATAGAGGTC
ATAAAATGTCAAGTCACAAAAGTTTAACCAAAGAATTTAAAGCAAAATTA
GCGTGTGAACGTGAAAACGGGTTTTTTCGTACGTGAATACGTGACTTGGC
AAAAATTTGTGCATGAATACGTGTTAATTGAGGGTTAACTGGGGAAGGCT
CATCATACCACGGTAGAATTTTTCTTTTTTATTTTGCTTTCAAATTTAGA
TTTTTTTGTCGCTCTTGAATAAATCTATTGTCAATTTCATGAATAAATTT
CATGACTCAAAGTAATTAAGAAAATCATTAAAAAAGAAAAACTTTCGAAC
GTTCTATTATGAGAGTGTTTTATGTGAATCGTTCGACTATTTACATAATT
TATTTTTTGTCTTTGCCTCTAAATGTATAATAAAACATATATTCAATAGG
TTTTCGTAGGTTATGGGATTTATGTATTAACCAACTTTTACCTATTGAAT
ATCTGCTTGTTGTTAAATGAAATTCTACTTTGATCAAGATGTTAAAACCA
ACCACCGAACGCCCGTGCTCTTTGAATCGGGCAACTAAATGCTAACTAGA
TTGGCCTGCATAGCTTTACTACCCAACTCTTCAGAGACTTTTTGATCAGC
GGTTTTAGGGATAGAAGTTAGACATGTTTTGATCTTACAAAGCTTAAAAT
TTTTTTATCATATTGGCAAATTTCTGAAAAGGACAATTTCCAACTAAATC
AATAAAATCATGTTTTATTACCCACCCTTATATTCATACAACGACAAGTG
TTGTCTGATATCATGTCTGCAtgaccattccttgtgacatGTTGTGATGG
TAAGCTTTGACATTCTTAtaagatattttaaatattacttaaaaactgga
aaatttgatctggtGACGTGATGGGAGagagaaaataaagaagatgAGAA
GGCGAATGATCCAAGTATTATATTCTAATTACAGGTGATGGAACTGGAGG
GGAATCTATCTACGGAGGAACTTTCAAAGGTTTGTTAATCCATTTCTTAT
TTGGCAATAGCGATATCTTCTCATGAATCGTTTTAGTCAATTATATTTTT
ATCCATGCAGAATCTCCCTAAACTGTTTAACGATTTGAAATCTAAATGAT
AATATGCTTACCTTTCACAAAACTCTACCCTTTGGTGgtacattgaaaaa
ataataattttactGCACTCTACAATAACTTTTATATATGACAGTTTATA
TAATCATCGATGAAGCAGAAAAAGTTTATAttagggtggggcgtcaaatg
tcaaagtcagaaaattcaagatgtagNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCAAAATTGGctgaa
cccccctgggggtactgattcgcactacaggcaaaaattggaaaaaatgg
cattttctggccttttcaggcctgtaaatatgtcatcactattgcaaatc
ttatttttttcacttgctgtgctaaattttatgaataaacaacaaaataa
tcatattggattgaaaattgtgcccattagaGCCCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGAAAAGAAAATC
Tcctcaatttttctaaaaatatatgaaaaactcctcaaatttttacagaa
atctcctcaaaaaagtgaaaaatcctTAATTCTCCTCAATTCcccttaaa
tttgaaattttgaaatctgtGGGAACCCTGTGAGAAGNAAATATATGAAA
AACTCCTCAAATTTTTACAGaaatctcctcaaaaaagtgaaaaatcctTA
ATTCTCCTCAATTCcccttaaatttgaaattttgaaatctgtGGGAACCC
TGTGAGAATTTTGAATGATttaataataacaaaaaaataaaaataactca
AGGGAACTGAATTTGATGTCGCATCAACTTTGAAAGGAAAATAGATTTTA
TACNACTCAAGGGAACTGAATTTGATGTCGCATCAACTTTGAAAGGAAAA
TAGATTTTATACGATGCTTGTAATATGGAAGGATGATGAATTCTGCTTTG
AATTCCAAATTAATTAGAATTAGCGAGAAATGAACAATTTTTTGAACGAA
AATTAATTCTGCGTTGTCCGCACTTTAGCAAGGAAAATCATTCTTTTGGT
AGATAAAAcaggaagtatttctttaaattgtttatgggtcatttttttga
attttcaaatagaAAATGGATTATTCGTTGCTTGTAATTATAGGGGGGGG
ATGTTAGGACTAATTTTTTAAgccatttgtcaaaagttgccattgggtat
aaaaagaagaaaaattcatgtaaaaaccctgtggaacttttttcaaggtt
gccacGGGTAGGGTGCCACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTCCTTTTCAGTACTAGC
TCCAGAGCCTAATTTCTCCTACCCCTTTACTAGACTGATGGAACAATTTG
AGCACAAAACTTTCTTCTTCCAAAGTGAACAATCGGTTCGGTCAACACTT
CTTTACAATTTTATGTGTGATTGACGGCTTTCCGCATCACTTCTTTCGTT
TTCCGCTTAAATTCGGTTTTTTTTATGACGGTTTGacgtccgccatcttt
gttgtttgtttgaCCTTCAATTGCTACTCCAACCAGCTGAAGATATTTTA
TGATCGTGAAATAATTTTTAACGtctagtttttattgaatagtttTCGTA
ATAAAATGTTAGCAAAAATGTATTCAGCATGTATTATCCTTTCCTACTTT
ATATACTGTAATacataaaaaatttttcaagacGTCGCAATTCTTCTTTA
ACTATTATTGAcattattttcatgaaaaactgtaggcaaaaaagttgttc
aggatgaaatttcctttccaaccGTATATAATACTTCGTGGTTtgtaatt
ataaattttttgaaaacttttgtgatgacgtcacaagtcaaCTTAAGAGG
CTTCTAACTTTTATTGACTTCATTTTCAGCAAAAACtgtaagaaaaaaag
tttttcagaattGAATTTCCTTTCCAATGGTATATAATACTTGATGGTTT
GGAtaccttcaaaatattttcataacgtcagcaaaaaagtgctgacgtca
gcagtcACGTGGTTTTCAGACGTGTCtatgtcaatttttttgttcagaat
ACAATTGTGCATGTCTGTGCcaagtttcatgcttttttcaCAAACTGAAG
TATTATTATGATACGCCACTGGACTATTAtgccatttttgcaaaataaca
tcCCCCCTAGTAATTAGGAAgttaaaaaaacattgattgtattttttaat
aagcgGGTGTGACAAGGTAGACTCAACATGAGTTATCTTTTATAAGGTGT
GCTATTACCATGTTATTTACGCTTTCCTGACAAGTGGGAAAGGATGAATT
TGACCAAGACAGTGTAGCGAATTTCAGTTTGCTCTTGCATTACTTCACTT
TCAGCAACCCAATCCTGAGATTGAATCAAGTAGAAACAATAATATTGGTC
TAGCCTGTACAATTCACTATTTTGTTGATTCTGCACCTCAAGAACGTTCA
TAAAGCTCCCGTCCAAAGTTTGAGCACAAAGTGCTCAAGCGCTCAAGCGC
TCAAGCGCTCAAGCAACATCATAGGCTTATTTCACAATCTTAGCATTACA
ATTCTTCCGAATGGTTTTATAGTCTGTCCGAACCTTGTAAAGTCTTCCAA
ATTATCACTAAGACAAGCATGcctgaataaaaaaaacaattggATGTTTG
CAATTTCTAAGAGCGCGATGATTTCATTTGCTAAAAGATGGAGGGGAATA
CAAGattaaaatagcaaaagaagGAAGCAGACAAAATTCGATTCCACCat
atttattataattttcCCAATTCTTAATTGTCATTCTCAAGATATTTTGA
GATTGTCGCGGAAACCTTTCTCTCAGATCATCAGCGACTTTGGCTGTAtt
acaaggtatttttcaagGTTGGGATACTTAGACAGTAGGATTTTTCATCT
CTTTCCGAAAATCATAACCTGATCCTTTCAATATCAAAACATAGCTTGGA
ATCTGAGCTCAAAGAAGACTTTCTCAGGACGCTCCCTCGTACAGAGGTAC
GAACGCGTATACGCGTCCCTCGCGATCGCTGTTGTTTTACGACATCATTG
TAGTAGTATAGGTTgggataattttgaaaatagaaatgaaTACCCGCCAA
TTTGCATTTATCCAACATGTAAAAATGTAACTAGTCAATTTAGACTTTGG
AAGACATTTTAATATCAatcttgttgttgtttttttaccgACAAAGCAAT
AATATCATTCGATTGGGTTCTAATGGCATTACTTTAATCTCCAGTCGTCA
AGCTTTTTGCCATTTAAGGTAAGTAAGAGTTAGATAGTATACTAATACAT
TATCTGAATACATTTTTTTTAGATGAATCCTTTGAGGTCGAACACAACCA
ACCTTATCTTTTGTCAATGGCCAACCGTGGCCCAAACACTAATGGCTCTC
AGTTTTTTATGTAAGTTTTATTTAAATAGTTTTACGCACattgtgaaatt
tttttgatgttcCAATTCCAAATAGGATAGAGACATTAGAGCGACTATTT
TATACTCTTGAGGTTAAGTTCTCTTTCTTTTGTATGCATTACTAAAGTAA
TTATTTCCAATTCATTCTCAAGGTAAAAGAACAACAGTTTTGCTATCTCA
CTTAAGTGTGAGTAACTAAATGTGTTGTGTCATCCGAAGGAAACAGTCCT
CCCTGTCTTATCTATTTTCTCCATCTATAGAACTTTGGCACCAGCCCCTC
ATTTGGATAAGTAAGTCATTTCTATCAAACAGATTATCAGCATTCCGGCG
GGGTCACGCAGCTACTGCGCTAGACGAAGACGACAACTTAAGGGGGAGGC
TGCCGTGATCTGACAAAAAGAAGTAaccatcaatttttaaaaattcatat
ttttgcaaaaatcaactCCTAAGAGTCCAGCATGTGTTTTCCAGTAGTTG
ATTTCTAGTAAAAGacttctttttatcatttttttggactaatatttcat
tttattttctgacgAAAGGAAGTAAAGTCACTTACTTCTTTTTAtagcct
gaaaaatgaaaattgcttGCAATTTTTTGCGGTTTATATTCTGACAAAAA
GAagtaacttgaaattttttagcTTGAAAGAGCTTGAGTAGAGTAAATCT
TGtgtagatttttctaaaatcaagaTGTTAAACTACTTTTAACTCCTTCC
TTTTAGATATTATACTACTCTAGGGTTTGGCCTTTCACAATCAGCAAAAG
TTTTGATCTTAAAACGATACCATTAATCCGTCATTTATgcaattatctca
aaataagaaaaatgtagttacttccttttgtcagatcACGGCAGGGGAGT
GATCATCAAATTCAAGCTTAAACTTGCATCGTCACAAAGGAGAGTTTTTT
TTGCATAGCTTTTTAATCTTTACAGCTTACTGAAACattactctcaggta
cctaataataaacagggggttgtaaattttttcaaatttaataaacggGG
CTGGGGTGAATTACTGTGGGTTGGAAATTGCCAGGGGTAGGAAATTGTAC
ATCTAAATACCCCAGAGGAAGGTATTTATCAAAAACTGGCTTTTTAGAAC
AAAATAGGGGATTCTCTTttgatagctgaaaatattttcaaaaattgata
aactaATGAGGTCCTAATGAGGTCCAAagggtttggaaaaaaatgttatc
aaaattgttcggtatttcggtaatAGCAAACCCCGTACGCGGGCCCTTCc
cttattaggcacctgagagtacatctgctaaatattttttttactgtGGG
GAGAGAGTAAATGAAATTCAGTTTTTCTCAACGCCACTTTGTGAACTCCA
CACTGACCATGGCTTCTTTCCCTATACACCAGAGTGCACTGCGTGTTTGG
ACGTGTGCTGTCTGGTCAAGAAATCGTCCGTGATATGGAGAATCAAAAGG
TGAATGACAACCACACTCCATACGCCGAAATACGTGTCACGCATTGTGGT
GAACTAGTGAAGAAATCTAAACAGACCAATCATGATCATGCAACAACATC
GAAGAGAAAATGTAAGTACCCTCGTGATGCTCCACCCAGTGTTCAAAGCT
cttccgtctcacagaaaaaaactgctttgaccACTGTCAACCTATACCTA
GAATCTTTTAAGGTAGATTTCACCTGCAAGTAGCATTAGGGTAGCTTACT
TATGCGTGAGTTGAACAAAGATCGccttttcaaaagattttaggGGACCC
CTATAAGCTGTGAATGACTCCCCCAGGTCATATAGGGATTCCAGGCATGT
TTTTCATTTGTCACTGCAATCTTGTTAGTGATTAGTTAATTTTCGACTCT
agaaaccacatcaaaacatagAAAATCAAAGAAGGAGAGTATGTTATCTG
TTCTGAGACTNGAACACATAGAATGGTGCGAGCTGGGAATAATCAATTAT
CAAATTCCGAGACTAactttttatgattttcttGTCCTTATGATATTTAA
AATATCATAAGCTTCTCTATCCCCTGGATTTCTGATCTGAATACCCATAA
TGGCAACTTTTCAGAAAGTGACCAAACATCCCAAACATCGGCTTGTCATA
TATCAATCATATATTTTTTTGCTCGCGAAATACTTTAAATCCGATTCAAG
TAATTAAActtctaatttttctaatttttctccTTGTAACAGCACGCAAA
AGctcatcatcgtcatcatcatccTCGTCGTCGTCGTCCTCAGAAGAAGA
AAGTGATGCTGAAGTAACCAAGAAAACGAGGaagaaggaaaagaagaaag
aaaagaaaaagaaaaaaaccaagAGGTTAGCAAAAATTCTCATTCATGAC
GGAGGGTAATTccccaaaattgacattttaaccAATTTTATCCGTTTGAC
ATTGAATTTTATGCTTAGGATATGATTCgaaaaactttaaactgatgCAG
ACTGGAATGTGTAAAAATTCCCACGACCAATCAAAGAAGTCCAAAAGGGC
GCGTAACTCACATGGCTGAGGGAATTCTCCattgtgaagat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032397XLOC_032397Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051104-exon-scaffold_194-1491911889:402..812TCONS_00051104-exon-scaffold_194-1491911889:402..812Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:402..812TCONS_00051104-exon-scaffold_194-1510915933:402..812Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:402..812TCONS_00051104-exon-scaffold_194-1575043694:402..812Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:905..952TCONS_00051104-exon-scaffold_194-1491911889:905..952Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:905..952TCONS_00051104-exon-scaffold_194-1510915933:905..952Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:905..952TCONS_00051104-exon-scaffold_194-1575043694:905..952Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:10645..10719TCONS_00051104-exon-scaffold_194-1491911889:10645..10719Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:10645..10719TCONS_00051104-exon-scaffold_194-1510915933:10645..10719Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:10645..10719TCONS_00051104-exon-scaffold_194-1575043694:10645..10719Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:11031..11138TCONS_00051104-exon-scaffold_194-1491911889:11031..11138Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:11031..11138TCONS_00051104-exon-scaffold_194-1510915933:11031..11138Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:11031..11138TCONS_00051104-exon-scaffold_194-1575043694:11031..11138Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:14136..14180TCONS_00051104-exon-scaffold_194-1491911889:14136..14180Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:14136..14180TCONS_00051104-exon-scaffold_194-1510915933:14136..14180Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:14136..14180TCONS_00051104-exon-scaffold_194-1575043694:14136..14180Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:20824..20911TCONS_00051104-exon-scaffold_194-1491911889:20824..20911Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:20824..20911TCONS_00051104-exon-scaffold_194-1510915933:20824..20911Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:20824..20911TCONS_00051104-exon-scaffold_194-1575043694:20824..20911Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:21182..21211TCONS_00051104-exon-scaffold_194-1491911889:21182..21211Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:21182..21211TCONS_00051104-exon-scaffold_194-1510915933:21182..21211Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:21182..21211TCONS_00051104-exon-scaffold_194-1575043694:21182..21211Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:22334..22512TCONS_00051104-exon-scaffold_194-1491911889:22334..22512Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:22334..22512TCONS_00051104-exon-scaffold_194-1510915933:22334..22512Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:22334..22512TCONS_00051104-exon-scaffold_194-1575043694:22334..22512Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1491911889:23144..23492TCONS_00051104-exon-scaffold_194-1491911889:23144..23492Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1510915933:23144..23492TCONS_00051104-exon-scaffold_194-1510915933:23144..23492Clytia hemisphaericaexon
TCONS_00051104-exon-scaffold_194-1575043694:23144..23492TCONS_00051104-exon-scaffold_194-1575043694:23144..23492Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_194supercontigscaffold_194:402..23492 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.46844	3.00049	3.32225	3.00227	21.3124	17.1108	11.1252	12.3224	7.55157	9.96312	7.44748	8.29679	11.1965	13.9252	9.64272	11.578	8.95923	10.4777	4.04238	4.14987	7.91266	8.77282	7.86942	8.8345	10.0217	9.94815	5.07356	4.88031	7.47731	8.02879
Blast
[Close]
BLAST of TCONS_00051104 vs. Swiss-Prot (Human)
Match: PPIG (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 6.221e-72
Identity = 117/176 (66.48%), Postives = 143/176 (81.25%), Query Frame = 3 
Query:  405 VKGYRPRCFFDININNVSVGRIILELFADICPKTCENFRALCTGEKGDGKTTLKPLHYKRTVFHRIVAGFIIQXXXXXXXXXXXXESIYGGTFKDESFEVEHNQPYLLSMANRGPNTNGSQFFITLAPAPHLDKVHCVFGRVLSGQEIVRDMENQKVNDNHTPYAEIRVTHCGELV 932
            +K  RPRCFFDI INN   GR++ ELF+D+CPKTCENFR LCTGEKG GK+T KPLHYK  +FHR+V  F++QGGDFS G+G GGESIYGG F+DESF V+HN+ +LLSMANRG +TNGSQFFIT  P PHLD  H VFG+V+SGQE+VR++ENQK +    P+AE+R+  CGEL+
Sbjct:    3 IKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELI 178
The following BLAST results are available for this feature:
BLAST of TCONS_00051104 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIG6.221e-7266.48Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
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