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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048936 ID=TCONS_00048936|Name=TCONS_00048936|organism=Clytia hemisphaerica|type=transcript|length=1264bp
aaaagaacacaggtcttgtgggaacagtgttttgtatggagacgTATGCC
GCATgtaagttccaaaaatgccaaaagaatgccagattcaccacatcttt
tttatttggcatttatggcactcaaattttgccacatttgccaaattttt
gtcaatcgaatgcaaaatagtaattggcaatcagggcaaaaatggcatat
tttgaagtcaatcgaattggctgtttGTTTTAtcgtcaatgatgacagtg
ctgttattaattttgttagagtTTGCAAGTACACTTTATATTTTTGATCC
CCATTCaaaaatcatattctggttttcatctTAATAGATGCTgatttaga
gctttagagctatcCTGCCTGCCTGCCCTATTTTATTGATTGTAAAAAAA
CAAGTGGGAGAGTCCTGCTGGTAATTGGTATAAACTGACAGCTAGAATTG
CTTCAATACCTCTAGCTAAAAGAGTAGCGTAGCTACATCAGTCATTTTTC
AACATACTTTATAAAATCACAGTACAGAAAAGGCAACACTCTCATCGTTT
CAAATACAAAgaaactaaaatctaaaaaaatcaaaccaatttATAATGTC
CAAAGCAGCAAAAAAGAACTGAATTCAATGTCGGTGGCCAAAGCCAATGT
TTTGAAATCTAGCCGCCATAAGCGCCGATTTGATATTTTATCCAATCAAA
ATGCTGTATTTGATCATGTGATCACAACATTGACTTCAGTCCGGTCctca
aattaaacattttctaaaagaaaaacaacaacaactatAATGGCGCGGTA
GTAGTGgaggaaaaaaaagtttgtttcaaAAACACATATCTATTTGCAGT
GTTCTGAGTTGAAATTTCAACTCATTTGATAAACTGCTGTACTCGTCGAG
AGAGATGAtaaagatttattgaattttgaattttctccaGCAACAAAATG
GATGTTGCTTTTCTCACATACGAAGGGATTGCTACAGATCCAGTGGAGAC
ACATTTGAACTTAGAAAAGCCTGTTTACATTTTGGGCAAACACTTTAAGC
CTGACGAACGTAAGTACTTTTCTCAATCTTGAAAATTACAGCTAAAAGCA
AGTGCTCTACTTTGGTTTGTACTATTACAAAAAAGACTCTTCNttgtttg
aatttttattgagtCATTACTTTCTGTTATCATCATTACAATTTACTATA
ATTTGTCCTGTTTTTCTTGGCTTCGATCCTTGATCGTTCTTTTTTGGTCA
TTGGTTTGGTTTCG Run BLAST on NCBI transcript from alignment at scaffold_148:7367..8630 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048936 ID=TCONS_00048936|Name=TCONS_00048936|organism=Clytia hemisphaerica|type=transcript|length=1264bp|location=Sequence derived from alignment at scaffold_148:7367..8630 (Clytia hemisphaerica)
CGAAACCAAACCAATGACCAAAAAAGAACGATCAAGGATCGAAGCCAAGA
AAAACAGGACAAATTATAGTAAATTGTAATGATGATAACAGAAAGTAATG
actcaataaaaattcaaacaaNGAAGAGTCTTTTTTGTAATAGTACAAAC
CAAAGTAGAGCACTTGCTTTTAGCTGTAATTTTCAAGATTGAGAAAAGTA
CTTACGTTCGTCAGGCTTAAAGTGTTTGCCCAAAATGTAAACAGGCTTTT
CTAAGTTCAAATGTGTCTCCACTGGATCTGTAGCAATCCCTTCGTATGTG
AGAAAAGCAACATCCATTTTGTTGCtggagaaaattcaaaattcaataaa
tctttaTCATCTCTCTCGACGAGTACAGCAGTTTATCAAATGAGTTGAAA
TTTCAACTCAGAACACTGCAAATAGATATGTGTTTttgaaacaaactttt
ttttcctcCACTACTACCGCGCCATTatagttgttgttgtttttctttta
gaaaatgtttaatttgagGACCGGACTGAAGTCAATGTTGTGATCACATG
ATCAAATACAGCATTTTGATTGGATAAAATATCAAATCGGCGCTTATGGC
GGCTAGATTTCAAAACATTGGCTTTGGCCACCGACATTGAATTCAGTTCT
TTTTTGCTGCTTTGGACATTATaaattggtttgatttttttagattttag
tttcTTTGTATTTGAAACGATGAGAGTGTTGCCTTTTCTGTACTGTGATT
TTATAAAGTATGTTGAAAAATGACTGATGTAGCTACGCTACTCTTTTAGC
TAGAGGTATTGAAGCAATTCTAGCTGTCAGTTTATACCAATTACCAGCAG
GACTCTCCCACTTGTTTTTTTACAATCAATAAAATAGGGCAGGCAGGCAG
gatagctctaaagctctaaatcAGCATCTATTAagatgaaaaccagaata
tgatttttGAATGGGGATCAAAAATATAAAGTGTACTTGCAAactctaac
aaaattaataacagcactgtcatcattgacgaTAAAACaaacagccaatt
cgattgacttcaaaatatgccatttttgccctgattgccaattactattt
tgcattcgattgacaaaaatttggcaaatgtggcaaaatttgagtgccat
aaatgccaaataaaaaagatgtggtgaatctggcattcttttggcatttt
tggaacttacATGCGGCATAcgtctccatacaaaacactgttcccacaag
acctgtgttctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048936-exon-scaffold_148-1491911889:7367..8630 | TCONS_00048936-exon-scaffold_148-1491911889:7367..8630 | Clytia hemisphaerica | exon |
| TCONS_00048936-exon-scaffold_148-1510915933:7367..8630 | TCONS_00048936-exon-scaffold_148-1510915933:7367..8630 | Clytia hemisphaerica | exon |
| TCONS_00048936-exon-scaffold_148-1575043694:7367..8630 | TCONS_00048936-exon-scaffold_148-1575043694:7367..8630 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_148 | supercontig | scaffold_148:7367..8630 . |
Blast
The following BLAST results are available for this feature:
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