TCONS_00046899 (transcript) - C. hemisphaerica

Overview
NameTCONS_00046899
Unique NameTCONS_00046899
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00046899 ID=TCONS_00046899|Name=TCONS_00046899|organism=Clytia hemisphaerica|type=transcript|length=3196bp
ATGCTTGTAAAAAAAGACCATACTTTCTGAGAACACATAAACGTGTCAGT
TCCTTGAAGTAGCCTAAGCCTGTTTTCCTATAAATTCGCAATTGAAATGA
GTAGCTCTGCAGTCAGAAGAAGGCTTCAGTACACTTAAAGTTAAAAATTA
ATCTTTAAGAAAATGCTACGCAGTAAAAGACCAGACCAGAGAAGACCGAA
AGGTGGACTTCTCGTTGGTAGACGGCATATTAAACCAAAAAATCTCAATA
AATCTATCAGTGCGGAAGATCTTTATAATATTGCATTTGGATTTGGAATT
TCAGCTTCAGGTGGCGGGGGCTCATTCATGCAAGGCTTGGAAATTGCTCA
AAGATCCATTGCAGATGGTTTTGAATCAGTCGATATTTACGAACCAAAGG
AGTTAACTGGAACAGGTCGAGCTTTCGTATCAGGTGGTATTGGTAAACCA
GAATCACTCCAAGATCCCATTGCATTTGGAGAAAAAGTATTAGTTCTTCT
TGAAAACTTGGATAAGTATCTCAGAAGATCTGGCTCTTCACTGCAAGGGA
TTCTTCCAGTAGAAGCAGGTCCAATCAATGGTCTTTTGCCAATCTACAAT
GTCCATGCTTAcaacaagaaacaaacagaTCCGGAAAGAAAAATATGGCT
GTTCGATTGTGATGGAGCTGGTCGCGCTGTTCCTGCACTGACAACTTTAA
TGTATGATTATTTCTCAGAAGGTACTTGCCCCATTACTTACAATTTCAAG
AATGATGCTGGCGATACAAGGAACATCTTATTGCAATCTGCTGAAGTGCT
CAACGGATCTGATGCAGAGCAGgtGTTCAGTAGCGTTATGCTTTATGGTG
ATGGTTCAATGAACGAATCTATTCCATTCACTTGTTGGCAGTTTGACGAA
GAAATGGCGAAAGATGGTATTAGATTTCCTACTGGAACGTACAGATTCTG
GAAAAACATGGGAGCACTTTTCAAACAAAGCTATAAGGACAAGGACAAAT
TAATAGAATTCTTGAAAGTCTTAAATTTCGAGAANACAAAGCTATAAGGA
CAAGGACAAATTAATAGAATTCTTGAAAGTCTTGAATTTCGAGAATTATT
ATTCGCGTCATTTATTCCAAGATCAAATTTATACCTCGACCGTTGATGAT
ATCGTTCAAGTTCCTAATGATCGTTGGAATGTTGGTTACATCAAATTCGA
TGTTGATGCTGATTCTGAGAAACGTCTTTATTTCGTCAACGAGAATCTAA
CAATCTCAAAGTTGACCTATAAGGACAATAAGCTGGAAACACTGGCCACT
GCTCCAAGTAGTATCACTTCATTCTTCAAGGATCCAAATCCAGATAAAGT
CCCAATTGGTACTGATGGAACCACTTTAGAACCTGGTTTCATTCCTTATA
ATACTGGTGAtattgacaaaattgcaaaattgaaAGGTGTCGAAATTATC
ATTGCTGTCACAGATCCTACCATTCCCAGTAAAATGAATTTCCTTTATGA
AGATGATATGCGATCAAGATTCCTTGATGTTATGAATGGCACCTTTGAGC
AATTAAATGCTGAAAATGATGAATATATTTTCCCTGATTTGATAGAAGAA
GTCATACCATTACCACCATTGAAAGATGATGTTTAAATGTGATGAAATTT
GATCAAGACTATATCTTATGGTTTGATTTTTAAACTGAAGGTgacttttg
aaagttttttgttatGGTAAATTGTATTAACCTTGAAGCTCTTAGCGCCA
ATAGAAACAGTTTAttatcaatgattttttatCCTAATTAGGGTCTTTTG
TCAATGTTTTGATAACTTCTTATTACCATTGTTTTTGTACACCTTGCTCC
CACTTCAAGGTGTTTATAAAtgcatttttgtaaatattacaGGGGATTAC
ATGGGTGTTTTCATCtttttaaaagttgttttcaTGTACGTATCAATGCA
TCAGTCTTTTAGCCTATCTTTGAAGGAATAAGCTTTCatagaatacacct
tttcgaccgtagtcgtgcgggcttttttgtccactttatcTCACTAAAAC
Cgttccaatccttttttgacgaatttttctattgtctattggtgcgaaaa
aaggactgggacagTTGTAGTgagataaagcggacaaaaaaattcccgcg
cggcaattggtggctacggtcgaaaaggtggttatttaaagtttttttcg
tgtacgtacacgttttttttattataagaatggtgttttttcatttcatc
atggatattcttaactttttggcgaaaatcatccaaaagtattcttacgg
tattcttaggttaagttCGAAactggcaatctacaggttaaaatgcatta
aaaatggcactcttaggttcagttgctaaattccatgatggtgatattct
taccatattcttaattttttggccattttcatcatggacattcttataaa
gtgtattcttataaaaaaaaagcgtgtatgtacGTACTGATGCATATTTG
AGCCTGTCTTTGAAGGAATAAGCTTCATAGAATTAGAAAACTATTTTTCA
TAAAGCTTCCTTTATCTTTTTGTATTTACTGATTTAGTTATCTCCTTATC
CAATTGAATTAAGTAGAAACCAAAATAAATATTTGCCTTTCCCACTTGGG
AGAAATAAACTACGCGTCAATGTAAAAACTTAGAACCATGTCTAGgtcaa
aaagttgatttttttttcttccgcTTGCTTGCTCCAGAAGCAGCCAGCGG
AGAGATTTAAACAAATATatatgttcttatcttctaggagaccgaATGTT
ATGACCTTGTGATGTGTTCTGACTTCTAGGAAATCTTcatcgcactattt
gtctccctaaacttatcactttatggtttgatgtgttctaaaatctagaa
aaacagGTTACAAGGTAAACATAGGATATTGGTTAGgatattttaagata
tttgtttttctccacgaaagatgtgttctgaaaatttttagggttactag
gcaacaagattacatcaattttttttggattatatccctgtctccttaaa
agatgtgttctgaagctttcctTGGGTAACCTAAACAACAAGTACACGtt
agatgaccttgattatacccctgtctcgtcagatcTATTTTTtagctgat
taatttttgaagatctgatcaaaacagatcaaaatttctagctgaa
Run BLAST on NCBI

protein sequence of TCONS_00046899-protein

>TCONS_00046899-protein ID=TCONS_00046899-protein|Name=TCONS_00046899-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MLRSKRPDQRRPKGGLLVGRRHIKPKNLNKSISAEDLYNIAFGFGISASG
GGGSFMQGLEIAQRSIADGFESVDIYEPKELTGTGRAFVSGGIGKPESLQ
DPIAFGEKVLVLLENLDKYLRRSGSSLQGILPVEAGPINGLLPIYNVHAY
NKKQTDPERKIWLFDCDGAGRAVPALTTLMYDYFSEGTCPITYNFKNDAG
DTRNILLQSAEVLNGSDAEQVFSSVMLYGDGSMNESIPFTCWQFDEEMAK
DGIRFPTGTYRFWKNMGALFKQSYKDKDKLIEFLKVLNFEXTKL
Run BLAST on NCBI

transcript from alignment at scaffold_118:311228..317623+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00046899 ID=TCONS_00046899|Name=TCONS_00046899|organism=Clytia hemisphaerica|type=transcript|length=6396bp|location=Sequence derived from alignment at scaffold_118:311228..317623+ (Clytia hemisphaerica)
ATGCTTGTAAAAAAAGACCATACTTTCTGAGAACACATAAACGTGTCAGT TCCTTGAAGTAGCCTAAGCCTGTTTTCCTATAAATTCGCAATTGAAATGA GTAGCTCTGCAGTCAGAAGAAGGCTTCAGTACACTTAAAGTTAAAAATTA ATCTTTAAGAAAATGCTACGCAGTAAAAGACCAGACCAGAGAAGACCGAA AGGTGGACTTCTCGTTGGTAGACGGCATATTAAACCAAAAAATCTCAATA AATCTATCAGTGCGGAAGATCTTTATAATATTGCATTTGGATTTGGAATT TCAGCTTCAGGTAATCAGATTAAGTTTGTGATTGGACGTATGTATTATGA TGTGTAATCTTTGTCTTTTGGGAACAGTTTTACAAAACGAAATCAAACAT CCCTGTATCAATGAAACCTTTTTCACCCACTCGGTATGTATAAAATTCCG ATGAATATGATCAAAGATTTGTGTTTTATGGATGTATAATTGACATACAA AACATTAGAataacatacatacatacatctAATATCCACCACTGTGAAGA GAAACTTGTGGAGCACACGCCTCATTGTAGTTATTCTCGCTTCTTTTAAC GAATTACTTTTGTGAATGTTGATTTGAAACACCCCTGTCACACTGCCCCA ATATGAACTCCCCCCATTGGGTCTAAAAATCTCTATCGAAATCTCAACGG GGATAGATATTCTATAGTTTCTAAGTGGGGATGATTTTGAAGTGCAGCTT TATCCCTtcaatttcgaatggggatgaaattaaagtcgattatccagtgg ggctgaaaattTAGGGTGATTTTACCATCGGGAgcaaaattttccagtag gATCCCAGCAtttctgtgatacaggggtgttttgAGCTAAACTAACCATA TTTGATATGATTTCGTTATTAGACCAGCGGTTGAGGTGGtaaattgtgtc acttcgtagggtacctcttagatcagggcaaatttttgatgttatgcccc taatagggtgtagaattgactaAAGAATTTACCCTTCAAATCTCCcacag ttttcgagtgaatcgattttcaGTTAATTGATATAACCTatcctttacta acggttttttcgaagtctgaaaatcaaatatctgaggctatcaacggatt cagcgtgaaaatcagataaagaaaattgggttatttgttaagtttctatC AGCTGAGGCGAAAAATCGTTTtgatgtcagcattttcctagagGGTGGAT AGTCCTGAATTGTAGTAGTATtaaaaaatggtatggtttgtcagctttcg atgtctagatctcgagatatttaggtttaaatattgaaaattatcgatat tttttgctgagtcaccagtttttcagcatatttactcaccttaaaaatga aatatctcaagatcgAAACATCAAAAGTTAACAAGCCATACCATTTTCAG ATagtactaattcagggctatccagctgtgggaatgattttttctgaaaa tcccTCTAGGATAATGCGCCCAAACGCccaaacgtcgatttttcgcctta aaaacgCCATTTCTCGGCCCCATGAGGTGGAAACTTAAcaaaccccattt tctttatctacttttcacgctgaatccgttgatagcctcagatatttgat tttcagacttagAAAAAAACCgttatcgattaactaaaaatcgattcact cgaaaactgcaggagattcgaagggcaaatttttttgtcaattctacacc ctactagaagcaaaatatcaaaaatttgccctgatctaaggggtgccttg aaaaaaaccatttttaaggccttttctgaatGTCGAACGCTGGTCTGTAT ATTCAGTTTACCATATACGTAGAATCACTTTTCCATTCATACATTTTAAG GTGGCGGGGGCTCATTCATGCAAGGCTTGGAAATTGCTCAAAGATCCATT GCAGATGGTTTTGAATCAGTCGATATTTACGAACCAAAGGAGTTAACTGG AACAGGTCGAGCTTTCGTATCAGGTGGTATTGGTAAACCAGAATCACTCC AAGATCCCATTGCATTTGGAGAAAAAGTATTAGTTCTTCTTGAAAACTTG GATAAGTATCTCAGAAGATCTGGCTCTTCACTGCAAGGGATTCTTCCAGT AGAAGCAGGTCCAATCAATGGTCTTTTGCCAATCTACAATGTCCATGCTT AcaacaagaaacaaacagaTCCGGAAAGAAAAATATGGCTGTTCGATTGT GATGGAGCTGGTCGCGCTGTTCCTGCACTGACAACTTTAATGTATGATTA TTTCTCAGAAGGTACTTGCCCCATTACTTACAATTTCAAGAATGATGCTG GCGATACAAGGAACATCTTATTGCAATCTGCTGAAGTGCTCAACGGATCT GATGCAGAGCAGGTAAGATTATTGAAAACGTCTGCATAATAATGATCCTT ACagcccgagggggggggggttctacccttgccgaccgacaagggtgctc cgctgaggttcaaaaaatgaaccctacgtgggactcgttttttcaaaatt tttgccgaaatttgcgaaaaaagtgaccctgaatgggactgaaattccaa aattttctcaaattttctacttttaaccccaaattttccaaaaaaaggca ccctacgagagactgatttttctatttcgatatttttgcgaccctacctg ggactcatggaggttaaaaaaggcggccagcggcgcatccccgtaaccca ttttgccctagtacctcCTACCCGGGTCTTACATTAATTCTTACTAGTCG TAAAACAGATCTTTTCAAGAGCTTAATGACCTGGGAATCACTAGAAagag ctcttccagaaaatttttgtacatggagGGGGGGAGGGGGCGGAGGATAC ATTGGATATTTTGGCCAGGGGTTGTGAAAAATCTGCGAAATTTGCTTTAT TTTAAGGGGCGGGCTTGCTGTGAttaggggtaattttgaatggggggggg ggggggagggggtggaggatacattggatattttgtccagGGGTTGTGAA AAATCTGCGAAATTTGCTTTATTTTAAGGGACAAACTTGCTctgattagg ggtgattttgaatgtccggggggtcaactgatgcttgtctggGGGTGAGA TCCGTTGTCCGGAGGTCCAAATTCATAATGTCCGGAAGggtaaatttcca gaaaattttaTAACCTCCACCTCCTATAATCAATTCTTTTCTGAAAGATC CCAAATGACAGAGAAAGAATTACTTTTACGCAGAAGCCCAAATTTGAAAT AAGCAACATGCAAGTATGTAGGCTCTCGGTTATGAGAACTTGCACTTATT CGAATAATTCGGTGCCCTTGGTTCTGTTTACCCTACTCCAGCAAAACCAC TCTCGTTTATTCGTACTTCAGCTATTCGAAGcgatttctatccccatttt gGACAATCATAGGCTACATCGCCTTcgttattcgaatttttcttattGGG AGATCATCGAGTGAGAACATAGATTTTCTGTCTTTCAGTTTTTTCTGCAA AACATTTGTTTCAATATTTATGGCTATTTACACTCTTGCTTCAAGcaatt tcttaaaaagtttaatATTTGTTTACGATCCCCAGAGACACAACAACCTC AATTGATTCAAAAAAGTCCAGGTTATAATATATTGAAAATCTGGCGAGAA AGTGAATTTTTTAGTTGGAGCTTCCGGTTATTTGAAGTTCTTGTAACCTT GGAGCTTCTAATAACTAAGAGTCTATTGGGCTCTAAAAGGTGTTGTGTTA TGTTTTTAAGTCAATAGTAATATGTCCACTATTATTTTCTGTATCTTCGT TTCTCGTTATATTCATTTTTCCAGATTTTCAACGTGGTATTAATTGGttt ctgagaaaattttaaaattcaacaTACTTCTGTGattttcatgtcaaaat ttttgtttaggtGTTCAGTAGCGTTATGCTTTATGGTGATGGTTCAATGA ACGAATCTATTCCATTCACATGTTGGCAGTTTGACGAAGAAATGGCAAAA GATGGTATTAGATTTCCTNTATTCCATTCACTTGTTGGCAGTTTGACGAA GAAATGGCGAAAGATGGTATTAGATTTCCTACTGGAACGTACAGATTCTG GAAAAACATGGGAGCACTTTTCAAACAAAGCTATAAGGACAAGGACAAAT TAATAGAATTCTTGAAAGTCTTAAATTTCGAGAANACAAAGCTATAAGGA CAAGGACAAATTAATAGAATTCTTGAAAGTCTTGAATTTCGAGAATTATT ATTCGCGTCATTTATTCCAAGATCAAATTTATACCTCGACCGTTGATGAT ATCGTTCAAGTTCCTAATGATCGTTGGAATGTTGGTTACATCAAATTCGA TGTTGATGCTGATTCTGAGAAACGTCTTTATTTCGTCAACGAGAATCTAA CAATCTCAAAGTTGACCTATAAGGACAATAAGCTGGAAACACTGGCCACT GCTCCAAGTAGTATCACTTCATTCTTCAAGGATCCAAATCCAGATAAAGT CCCAATTGGTACTGATGGAACCACTTTAGAACCTGGTTTCATTCCTTATA ATACTGGTGAtattgacaaaattgcaaaattgaaAGGTGTCGAAATTATC ATTGCTGTCACAGATCCTACCATTCCCAGTAAAATGAATTTCCTTTATGA AGATGATATGCGATCAAGATTCCTTGATGTTATGAATGGCACCTTTGAGC AATTAAATGCTGAAAATGATGAATATATTTTCCCTGATTTGATAGAAGAA GTCATACCATTACCACCATTGAAAGATGATGTTTAAATGTGATGAAATTT GATCAAGACTATATCTTATGGTTTGATTTTTAAACTGAAGGTgacttttg aaagttttttgttatGGTAAATTGTATTAACCTTGAAGCTCTTAGCGCCA ATAGAAACAGTTTAttatcaatgattttttatCCTAATTAGGGTCTTTTG TCAATGTTTTGATAACTTCTTATTACCATTGTTTTTGTACACCTTGCTCC CACTTCAAGGTGTTTATAAAtgcatttttgtaaatattacaGGGGATTAC ATGGGTGTTTTCATCtttttaaaagttgttttcaTGTACGTATCAATGCA TCAGTCTTTTAGCCTATCTTTGAAGGAATAAGCTTTCatagaatacacct tttcgaccgtagtcgtgcgggcttttttgtccactttatcTCACTAAAAC Cgttccaatccttttttgacgaatttttctattgtctattggtgcgaaaa aaggactgggacagTTGTAGTgagataaagcggacaaaaaaattcccgcg cggcaattggtggctacggtcgaaaaggtggttatttaaagtttttttcg tgtacgtacacgttttttttattataagaatggtgttttttcatttcatc atggatattcttaactttttggcgaaaatcatccaaaagtattcttacgg tattcttaggttaagttCGAAactggcaatctacaggttaaaatgcatta aaaatggcactcttaggttcagttgctaaattccatgatggtgatattct taccatattcttaattttttggccattttcatcatggacattcttataaa gtgtattcttataaaaaaaaagcgtgtatgtacGTACTGATGCATATTTG AGCCTGTCTTTGAAGGAATAAGCTTCATAGAATTAGAAAACTATTTTTCA TAAAGCTTCCTTTATCTTTTTGTATTTACTGATTTAGTTATCTCCTTATC CAATTGAATTAAGTAGAAACCAAAATAAATATTTGCCTTTCCCACTTGGG AGAAATAAACTACGCGTCAATGTAAAAACTTAGAACCATGTCTAGgtcaa aaagttgatttttttttcttccgcTTGCTTGCTCCAGAAGCAGCCAGCGG AGAGATTTAAACAAATATatatgttcttatcttctaggagaccgaATGTT ATGACCTTGTGATGTGTTCTGACTTCTAGGAAATCTTcatcgcactattt gtctccctaaacttatcactttatggtttgatgtgttctaaaatctagaa aaacagGTTACAAGGTAAACATAGGATATTGGTTAGgatattttaagata tttgtttttctccacgaaagatgtgttctgaaaatttttagggttactag gcaacaagattacatcaattttttttggattatatccctgtctccttaaa agatgtgttctgaagctttcctTGGGTAACCTAAACAACAAGTACACGtt agatgaccttgattatacccctgtctcgtcagatcTATTTTTtagctgat taatttttgaagatctgatcaaaacagatcaaaatttctagctgaa

Coding sequence (CDS) from alignment at scaffold_118:311228..317623+

>TCONS_00046899 ID=TCONS_00046899|Name=TCONS_00046899|organism=Clytia hemisphaerica|type=CDS|length=3540bp|location=Sequence derived from alignment at scaffold_118:311228..317623+ (Clytia hemisphaerica)
ATGCTACGCAGTAAAAGACCAGACCAGAGAAGACCGAAAGGTGGACTTCT
CGTTGGTAGACGGCATATTAAACCAAAAAATCTCAATAAATCTATCAGTG
CGGAAGATCTTTATAATATTGCATTTGGATTTGGAATTTCAGCTTCAGGT
GGCGGGGGCTCATTCATGCAAGGCTTGGAAATTGCTCAAAGATCCATTGC
AGATGGTTTTGAATCAGTCGATATTTACGAACCAAAGGAGTTAACTGGAA
CAGGTCGAGCTTTCGTATCAGGTGGTATTGGTAAACCAGAATCACTCCAA
GATCCCATTGCATTTGGAGAAAAAGTATTAGTTCTTCTTGAAAACTTGGA
TAAGTATCTCAGAAGATCTGGCTCTTCACTGCAAGGGATTCTTCCAGTAG
AAGCAGGTCCAATCAATGGTCTTTTGCCAATCTACAATGTCCATGCTTAc
aacaagaaacaaacagaTCCGGAAAGAAAAATATGGCTGTTCGATTGTGA
TGGAGCTGGTCGCGCTGTTCCTGCACTGACAACTTTAATGTATGATTATT
TCTCAGAAGGTACTTGCCCCATTACTTACAATTTCAAGAATGATGCTGGC
GATACAAGGAACATCTTATTGCAATCTGCTGAAGTGCTCAACGGATCTGA
TGCAGAGCAGgtGTTCAGTAGCGTTATGCTTTATGGTGATGGTTCAATGA
ACGAATCTATTCCATTCACTTGTTGGCAGTTTGACGAAGAAATGGCGAAA
GATGGTATTAGATTTCCTACTGGAACGTACAGATTCTGGAAAAACATGGG
AGCACTTTTCAAACAAAGCTATAAGGACAAGGACAAATTAATAGAATTCT
TGAAAGTCTTAAATTTCGAGAANACAAAGCTATAAATGCTACGCAGTAAA
AGACCAGACCAGAGAAGACCGAAAGGTGGACTTCTCGTTGGTAGACGGCA
TATTAAACCAAAAAATCTCAATAAATCTATCAGTGCGGAAGATCTTTATA
ATATTGCATTTGGATTTGGAATTTCAGCTTCAGGTGGCGGGGGCTCATTC
ATGCAAGGCTTGGAAATTGCTCAAAGATCCATTGCAGATGGTTTTGAATC
AGTCGATATTTACGAACCAAAGGAGTTAACTGGAACAGGTCGAGCTTTCG
TATCAGGTGGTATTGGTAAACCAGAATCACTCCAAGATCCCATTGCATTT
GGAGAAAAAGTATTAGTTCTTCTTGAAAACTTGGATAAGTATCTCAGAAG
ATCTGGCTCTTCACTGCAAGGGATTCTTCCAGTAGAAGCAGGTCCAATCA
ATGGTCTTTTGCCAATCTACAATGTCCATGCTTAcaacaagaaacaaaca
gaTCCGGAAAGAAAAATATGGCTGTTCGATTGTGATGGAGCTGGTCGCGC
TGTTCCTGCACTGACAACTTTAATGTATGATTATTTCTCAGAAGGTACTT
GCCCCATTACTTACAATTTCAAGAATGATGCTGGCGATACAAGGAACATC
TTATTGCAATCTGCTGAAGTGCTCAACGGATCTGATGCAGAGCAGgtGTT
CAGTAGCGTTATGCTTTATGGTGATGGTTCAATGAACGAATCTATTCCAT
TCACTTGTTGGCAGTTTGACGAAGAAATGGCGAAAGATGGTATTAGATTT
CCTACTGGAACGTACAGATTCTGGAAAAACATGGGAGCACTTTTCAAACA
AAGCTATAAGGACAAGGACAAATTAATAGAATTCTTGAAAGTCTTAAATT
TCGAGAANACAAAGCTATAAATGCTACGCAGTAAAAGACCAGACCAGAGA
AGACCGAAAGGTGGACTTCTCGTTGGTAGACGGCATATTAAACCAAAAAA
TCTCAATAAATCTATCAGTGCGGAAGATCTTTATAATATTGCATTTGGAT
TTGGAATTTCAGCTTCAGGTGGCGGGGGCTCATTCATGCAAGGCTTGGAA
ATTGCTCAAAGATCCATTGCAGATGGTTTTGAATCAGTCGATATTTACGA
ACCAAAGGAGTTAACTGGAACAGGTCGAGCTTTCGTATCAGGTGGTATTG
GTAAACCAGAATCACTCCAAGATCCCATTGCATTTGGAGAAAAAGTATTA
GTTCTTCTTGAAAACTTGGATAAGTATCTCAGAAGATCTGGCTCTTCACT
GCAAGGGATTCTTCCAGTAGAAGCAGGTCCAATCAATGGTCTTTTGCCAA
TCTACAATGTCCATGCTTAcaacaagaaacaaacagaTCCGGAAAGAAAA
ATATGGCTGTTCGATTGTGATGGAGCTGGTCGCGCTGTTCCTGCACTGAC
AACTTTAATGTATGATTATTTCTCAGAAGGTACTTGCCCCATTACTTACA
ATTTCAAGAATGATGCTGGCGATACAAGGAACATCTTATTGCAATCTGCT
GAAGTGCTCAACGGATCTGATGCAGAGCAGgtGTTCAGTAGCGTTATGCT
TTATGGTGATGGTTCAATGAACGAATCTATTCCATTCACTTGTTGGCAGT
TTGACGAAGAAATGGCGAAAGATGGTATTAGATTTCCTACTGGAACGTAC
AGATTCTGGAAAAACATGGGAGCACTTTTCAAACAAAGCTATAAGGACAA
GGACAAATTAATAGAATTCTTGAAAGTCTTAAATTTCGAGAANACAAAGC
TATAAATGCTACGCAGTAAAAGACCAGACCAGAGAAGACCGAAAGGTGGA
CTTCTCGTTGGTAGACGGCATATTAAACCAAAAAATCTCAATAAATCTAT
CAGTGCGGAAGATCTTTATAATATTGCATTTGGATTTGGAATTTCAGCTT
CAGGTGGCGGGGGCTCATTCATGCAAGGCTTGGAAATTGCTCAAAGATCC
ATTGCAGATGGTTTTGAATCAGTCGATATTTACGAACCAAAGGAGTTAAC
TGGAACAGGTCGAGCTTTCGTATCAGGTGGTATTGGTAAACCAGAATCAC
TCCAAGATCCCATTGCATTTGGAGAAAAAGTATTAGTTCTTCTTGAAAAC
TTGGATAAGTATCTCAGAAGATCTGGCTCTTCACTGCAAGGGATTCTTCC
AGTAGAAGCAGGTCCAATCAATGGTCTTTTGCCAATCTACAATGTCCATG
CTTAcaacaagaaacaaacagaTCCGGAAAGAAAAATATGGCTGTTCGAT
TGTGATGGAGCTGGTCGCGCTGTTCCTGCACTGACAACTTTAATGTATGA
TTATTTCTCAGAAGGTACTTGCCCCATTACTTACAATTTCAAGAATGATG
CTGGCGATACAAGGAACATCTTATTGCAATCTGCTGAAGTGCTCAACGGA
TCTGATGCAGAGCAGgtGTTCAGTAGCGTTATGCTTTATGGTGATGGTTC
AATGAACGAATCTATTCCATTCACTTGTTGGCAGTTTGACGAAGAAATGG
CGAAAGATGGTATTAGATTTCCTACTGGAACGTACAGATTCTGGAAAAAC
ATGGGAGCACTTTTCAAACAAAGCTATAAGGACAAGGACAAATTAATAGA
ATTCTTGAAAGTCTTAAATTTCGAGAANACAAAGCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029925XLOC_029925Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046899-exon-scaffold_118-1491911889:311228..311537TCONS_00046899-exon-scaffold_118-1491911889:311228..311537Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1510915933:311228..311537TCONS_00046899-exon-scaffold_118-1510915933:311228..311537Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1575043694:311228..311537TCONS_00046899-exon-scaffold_118-1575043694:311228..311537Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1491911889:313128..313639TCONS_00046899-exon-scaffold_118-1491911889:313128..313639Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1510915933:313128..313639TCONS_00046899-exon-scaffold_118-1510915933:313128..313639Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1575043694:313128..313639TCONS_00046899-exon-scaffold_118-1575043694:313128..313639Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1491911889:315188..315246TCONS_00046899-exon-scaffold_118-1491911889:315188..315246Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1510915933:315188..315246TCONS_00046899-exon-scaffold_118-1510915933:315188..315246Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1575043694:315188..315246TCONS_00046899-exon-scaffold_118-1575043694:315188..315246Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1491911889:315309..317623TCONS_00046899-exon-scaffold_118-1491911889:315309..317623Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1510915933:315309..317623TCONS_00046899-exon-scaffold_118-1510915933:315309..317623Clytia hemisphaericaexon
TCONS_00046899-exon-scaffold_118-1575043694:315309..317623TCONS_00046899-exon-scaffold_118-1575043694:315309..317623Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00046899-proteinTCONS_00046899-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:311228..317623 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.153393 0.281057 0.289111 0.395139 0.365829 0.343594 0.672988 0.628862 0.442518 0.511685 0.362262 1.03446 3.67863 3.33511 48.4965 45.512 4.45543 3.55719 6.15093 5.73032 2.34875 2.32753 25.4523 23.3621 12.9789 10.6616 126.532 101.597 29.5729 19.5171
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027479DUF917_N
IPR010318DUF917
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00046899 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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