XLOC_029925 (gene) - C. hemisphaerica

Overview
NameXLOC_029925
Unique NameXLOC_029925
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_118:311228..317623+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029925 ID=XLOC_029925|Name=XLOC_029925|organism=Clytia hemisphaerica|type=gene|length=6396bp|location=Sequence derived from alignment at scaffold_118:311228..317623+ (Clytia hemisphaerica)
ATGCTTGTAAAAAAAGACCATACTTTCTGAGAACACATAAACGTGTCAGT TCCTTGAAGTAGCCTAAGCCTGTTTTCCTATAAATTCGCAATTGAAATGA GTAGCTCTGCAGTCAGAAGAAGGCTTCAGTACACTTAAAGTTAAAAATTA ATCTTTAAGAAAATGCTACGCAGTAAAAGACCAGACCAGAGAAGACCGAA AGGTGGACTTCTCGTTGGTAGACGGCATATTAAACCAAAAAATCTCAATA AATCTATCAGTGCGGAAGATCTTTATAATATTGCATTTGGATTTGGAATT TCAGCTTCAGGTAATCAGATTAAGTTTGTGATTGGACGTATGTATTATGA TGTGTAATCTTTGTCTTTTGGGAACAGTTTTACAAAACGAAATCAAACAT CCCTGTATCAATGAAACCTTTTTCACCCACTCGGTATGTATAAAATTCCG ATGAATATGATCAAAGATTTGTGTTTTATGGATGTATAATTGACATACAA AACATTAGAataacatacatacatacatctAATATCCACCACTGTGAAGA GAAACTTGTGGAGCACACGCCTCATTGTAGTTATTCTCGCTTCTTTTAAC GAATTACTTTTGTGAATGTTGATTTGAAACACCCCTGTCACACTGCCCCA ATATGAACTCCCCCCATTGGGTCTAAAAATCTCTATCGAAATCTCAACGG GGATAGATATTCTATAGTTTCTAAGTGGGGATGATTTTGAAGTGCAGCTT TATCCCTtcaatttcgaatggggatgaaattaaagtcgattatccagtgg ggctgaaaattTAGGGTGATTTTACCATCGGGAgcaaaattttccagtag gATCCCAGCAtttctgtgatacaggggtgttttgAGCTAAACTAACCATA TTTGATATGATTTCGTTATTAGACCAGCGGTTGAGGTGGtaaattgtgtc acttcgtagggtacctcttagatcagggcaaatttttgatgttatgcccc taatagggtgtagaattgactaAAGAATTTACCCTTCAAATCTCCcacag ttttcgagtgaatcgattttcaGTTAATTGATATAACCTatcctttacta acggttttttcgaagtctgaaaatcaaatatctgaggctatcaacggatt cagcgtgaaaatcagataaagaaaattgggttatttgttaagtttctatC AGCTGAGGCGAAAAATCGTTTtgatgtcagcattttcctagagGGTGGAT AGTCCTGAATTGTAGTAGTATtaaaaaatggtatggtttgtcagctttcg atgtctagatctcgagatatttaggtttaaatattgaaaattatcgatat tttttgctgagtcaccagtttttcagcatatttactcaccttaaaaatga aatatctcaagatcgAAACATCAAAAGTTAACAAGCCATACCATTTTCAG ATagtactaattcagggctatccagctgtgggaatgattttttctgaaaa tcccTCTAGGATAATGCGCCCAAACGCccaaacgtcgatttttcgcctta aaaacgCCATTTCTCGGCCCCATGAGGTGGAAACTTAAcaaaccccattt tctttatctacttttcacgctgaatccgttgatagcctcagatatttgat tttcagacttagAAAAAAACCgttatcgattaactaaaaatcgattcact cgaaaactgcaggagattcgaagggcaaatttttttgtcaattctacacc ctactagaagcaaaatatcaaaaatttgccctgatctaaggggtgccttg aaaaaaaccatttttaaggccttttctgaatGTCGAACGCTGGTCTGTAT ATTCAGTTTACCATATACGTAGAATCACTTTTCCATTCATACATTTTAAG GTGGCGGGGGCTCATTCATGCAAGGCTTGGAAATTGCTCAAAGATCCATT GCAGATGGTTTTGAATCAGTCGATATTTACGAACCAAAGGAGTTAACTGG AACAGGTCGAGCTTTCGTATCAGGTGGTATTGGTAAACCAGAATCACTCC AAGATCCCATTGCATTTGGAGAAAAAGTATTAGTTCTTCTTGAAAACTTG GATAAGTATCTCAGAAGATCTGGCTCTTCACTGCAAGGGATTCTTCCAGT AGAAGCAGGTCCAATCAATGGTCTTTTGCCAATCTACAATGTCCATGCTT AcaacaagaaacaaacagaTCCGGAAAGAAAAATATGGCTGTTCGATTGT GATGGAGCTGGTCGCGCTGTTCCTGCACTGACAACTTTAATGTATGATTA TTTCTCAGAAGGTACTTGCCCCATTACTTACAATTTCAAGAATGATGCTG GCGATACAAGGAACATCTTATTGCAATCTGCTGAAGTGCTCAACGGATCT GATGCAGAGCAGGTAAGATTATTGAAAACGTCTGCATAATAATGATCCTT ACagcccgagggggggggggttctacccttgccgaccgacaagggtgctc cgctgaggttcaaaaaatgaaccctacgtgggactcgttttttcaaaatt tttgccgaaatttgcgaaaaaagtgaccctgaatgggactgaaattccaa aattttctcaaattttctacttttaaccccaaattttccaaaaaaaggca ccctacgagagactgatttttctatttcgatatttttgcgaccctacctg ggactcatggaggttaaaaaaggcggccagcggcgcatccccgtaaccca ttttgccctagtacctcCTACCCGGGTCTTACATTAATTCTTACTAGTCG TAAAACAGATCTTTTCAAGAGCTTAATGACCTGGGAATCACTAGAAagag ctcttccagaaaatttttgtacatggagGGGGGGAGGGGGCGGAGGATAC ATTGGATATTTTGGCCAGGGGTTGTGAAAAATCTGCGAAATTTGCTTTAT TTTAAGGGGCGGGCTTGCTGTGAttaggggtaattttgaatggggggggg ggggggagggggtggaggatacattggatattttgtccagGGGTTGTGAA AAATCTGCGAAATTTGCTTTATTTTAAGGGACAAACTTGCTctgattagg ggtgattttgaatgtccggggggtcaactgatgcttgtctggGGGTGAGA TCCGTTGTCCGGAGGTCCAAATTCATAATGTCCGGAAGggtaaatttcca gaaaattttaTAACCTCCACCTCCTATAATCAATTCTTTTCTGAAAGATC CCAAATGACAGAGAAAGAATTACTTTTACGCAGAAGCCCAAATTTGAAAT AAGCAACATGCAAGTATGTAGGCTCTCGGTTATGAGAACTTGCACTTATT CGAATAATTCGGTGCCCTTGGTTCTGTTTACCCTACTCCAGCAAAACCAC TCTCGTTTATTCGTACTTCAGCTATTCGAAGcgatttctatccccatttt gGACAATCATAGGCTACATCGCCTTcgttattcgaatttttcttattGGG AGATCATCGAGTGAGAACATAGATTTTCTGTCTTTCAGTTTTTTCTGCAA AACATTTGTTTCAATATTTATGGCTATTTACACTCTTGCTTCAAGcaatt tcttaaaaagtttaatATTTGTTTACGATCCCCAGAGACACAACAACCTC AATTGATTCAAAAAAGTCCAGGTTATAATATATTGAAAATCTGGCGAGAA AGTGAATTTTTTAGTTGGAGCTTCCGGTTATTTGAAGTTCTTGTAACCTT GGAGCTTCTAATAACTAAGAGTCTATTGGGCTCTAAAAGGTGTTGTGTTA TGTTTTTAAGTCAATAGTAATATGTCCACTATTATTTTCTGTATCTTCGT TTCTCGTTATATTCATTTTTCCAGATTTTCAACGTGGTATTAATTGGttt ctgagaaaattttaaaattcaacaTACTTCTGTGattttcatgtcaaaat ttttgtttaggtGTTCAGTAGCGTTATGCTTTATGGTGATGGTTCAATGA ACGAATCTATTCCATTCACATGTTGGCAGTTTGACGAAGAAATGGCAAAA GATGGTATTAGATTTCCTNTATTCCATTCACTTGTTGGCAGTTTGACGAA GAAATGGCGAAAGATGGTATTAGATTTCCTACTGGAACGTACAGATTCTG GAAAAACATGGGAGCACTTTTCAAACAAAGCTATAAGGACAAGGACAAAT TAATAGAATTCTTGAAAGTCTTAAATTTCGAGAANACAAAGCTATAAGGA CAAGGACAAATTAATAGAATTCTTGAAAGTCTTGAATTTCGAGAATTATT ATTCGCGTCATTTATTCCAAGATCAAATTTATACCTCGACCGTTGATGAT ATCGTTCAAGTTCCTAATGATCGTTGGAATGTTGGTTACATCAAATTCGA TGTTGATGCTGATTCTGAGAAACGTCTTTATTTCGTCAACGAGAATCTAA CAATCTCAAAGTTGACCTATAAGGACAATAAGCTGGAAACACTGGCCACT GCTCCAAGTAGTATCACTTCATTCTTCAAGGATCCAAATCCAGATAAAGT CCCAATTGGTACTGATGGAACCACTTTAGAACCTGGTTTCATTCCTTATA ATACTGGTGAtattgacaaaattgcaaaattgaaAGGTGTCGAAATTATC ATTGCTGTCACAGATCCTACCATTCCCAGTAAAATGAATTTCCTTTATGA AGATGATATGCGATCAAGATTCCTTGATGTTATGAATGGCACCTTTGAGC AATTAAATGCTGAAAATGATGAATATATTTTCCCTGATTTGATAGAAGAA GTCATACCATTACCACCATTGAAAGATGATGTTTAAATGTGATGAAATTT GATCAAGACTATATCTTATGGTTTGATTTTTAAACTGAAGGTgacttttg aaagttttttgttatGGTAAATTGTATTAACCTTGAAGCTCTTAGCGCCA ATAGAAACAGTTTAttatcaatgattttttatCCTAATTAGGGTCTTTTG TCAATGTTTTGATAACTTCTTATTACCATTGTTTTTGTACACCTTGCTCC CACTTCAAGGTGTTTATAAAtgcatttttgtaaatattacaGGGGATTAC ATGGGTGTTTTCATCtttttaaaagttgttttcaTGTACGTATCAATGCA TCAGTCTTTTAGCCTATCTTTGAAGGAATAAGCTTTCatagaatacacct tttcgaccgtagtcgtgcgggcttttttgtccactttatcTCACTAAAAC Cgttccaatccttttttgacgaatttttctattgtctattggtgcgaaaa aaggactgggacagTTGTAGTgagataaagcggacaaaaaaattcccgcg cggcaattggtggctacggtcgaaaaggtggttatttaaagtttttttcg tgtacgtacacgttttttttattataagaatggtgttttttcatttcatc atggatattcttaactttttggcgaaaatcatccaaaagtattcttacgg tattcttaggttaagttCGAAactggcaatctacaggttaaaatgcatta aaaatggcactcttaggttcagttgctaaattccatgatggtgatattct taccatattcttaattttttggccattttcatcatggacattcttataaa gtgtattcttataaaaaaaaagcgtgtatgtacGTACTGATGCATATTTG AGCCTGTCTTTGAAGGAATAAGCTTCATAGAATTAGAAAACTATTTTTCA TAAAGCTTCCTTTATCTTTTTGTATTTACTGATTTAGTTATCTCCTTATC CAATTGAATTAAGTAGAAACCAAAATAAATATTTGCCTTTCCCACTTGGG AGAAATAAACTACGCGTCAATGTAAAAACTTAGAACCATGTCTAGgtcaa aaagttgatttttttttcttccgcTTGCTTGCTCCAGAAGCAGCCAGCGG AGAGATTTAAACAAATATatatgttcttatcttctaggagaccgaATGTT ATGACCTTGTGATGTGTTCTGACTTCTAGGAAATCTTcatcgcactattt gtctccctaaacttatcactttatggtttgatgtgttctaaaatctagaa aaacagGTTACAAGGTAAACATAGGATATTGGTTAGgatattttaagata tttgtttttctccacgaaagatgtgttctgaaaatttttagggttactag gcaacaagattacatcaattttttttggattatatccctgtctccttaaa agatgtgttctgaagctttcctTGGGTAACCTAAACAACAAGTACACGtt agatgaccttgattatacccctgtctcgtcagatcTATTTTTtagctgat taatttttgaagatctgatcaaaacagatcaaaatttctagctgaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046899TCONS_00046899Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046899-proteinTCONS_00046899-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_118supercontigscaffold_118:311228..317623 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.28 0.29 0.4 0.37 0.34 0.67 0.63 0.44 0.51 0.36 1.03 3.68 3.34 48.5 45.51 4.46 3.56 6.15 5.73 2.35 2.33 25.45 23.36 12.98 10.66 126.53 101.6 29.57 19.52