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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046174 ID=TCONS_00046174|Name=TCONS_00046174|organism=Clytia hemisphaerica|type=transcript|length=523bp
TCCTGGTGGTGGTGGCCCCCAGCTAAATCAATATGGCGCCAGAAACAAAA
ATCCTggtGTGTATTTGTTGGTTGGACACGTCATCATGGATGTCAATGTT
CGACAAGATATCGACACGCGATTTGATTGGCTCAAACAAAAGACTGTTCG
AATGAGGAAATTTTCACAAGAATCGACGCGAACGAGAACAAGCACCATGT
GAATAAATTGCGAGACAAACTTAATCACTTTCTTGAAGATTTGAGGATTT
AGCTAAGCTACGCCAAAGTCATTTTATTTGAATTCGATATAAACATGTGG
TAGAAACTTAGTAGAAACAAGTATGAACTTCGGCCTGGATTAAAAACAAA
CCTATTTACTTTACTTAGATTTCTGTTGGGCCTTGGGCCTACATAATGAG
ATTTGTCTTATCGAAATTTTTCATCACTTAGGACTTGTTCGTTAAACTTG
AAATGAAAACTTTTGTTTAGTAAAATGTTTGGGCATTTATCTTTTTCAAA
GGGGCGTTTGAAATAAGGGGCGT Run BLAST on NCBI transcript from alignment at scaffold_106:331659..333374- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046174 ID=TCONS_00046174|Name=TCONS_00046174|organism=Clytia hemisphaerica|type=transcript|length=1716bp|location=Sequence derived from alignment at scaffold_106:331659..333374- (Clytia hemisphaerica)
TCCTGGTGGTGGTGGCCCCCAGCTAAATCAATATGGCGCCAGAAACAAAA
ATCCTGTAATATTTTTGCAAAACCCAGCTTAGGAAGCGTGAGAAAGCACT
CATTTATTACGAAAATTGCACCCTTTCCCTTTCTTGAATATCAATGTTTT
TATGACATCGTGTTCTTCTCTTTAACTGGGTGGACCACATTTATCTTAAA
ATTCTCTTAAGTTAACTGAACTTAGAGGTTTAGAGGGGGCGCCAAAAACA
AAATATCTTTTAAAGGTCGCCAAATATTTGCTTGGGATTGATATTCCCGT
GTTTTCATGACTGGGAATTTCATTGTTTTCATGGAAAAAAAAACAGCGCA
AAGTTTTACAGTGAGGATTTGTTGATTTTATTATTTTCAGTGAAGATGAA
AATTGGAGCATAGTTTTCTACTGGGGACGATATTTTGGCTAATTCTTCCA
GTTGGAAGGGTTCCCACTGGGTCTATGAGAAGGTGATCTTGATATCTGGT
TCGAAGCCTCGCTTTTCATGTGTGTTATCTTATAGACTCTCCTATATAAA
AAGAGTTACCGAAGAATTACTATTTGGAGGATTACTAACGCATGAATAGA
CGACTGTTTTTAAAATTTTCAGCTCAAGTACAAAGACGTTTTTGGTGTTG
GTGCCACTACTTGGGATACCATTTATATTGGCACCCTTTGTTGAATACAG
CATTTATATCGCTTACACTTTCGTCATCATGAATGGACTCACGGTATGTG
GAAATTTTTTTTCATGATTTTGTTTACTGACTGCTGCGACTATAATTTTT
CAAATTGCTTGATAATTTTTACTAAGAAAGACACATTATTTAGACATTCA
TTCTCACAGACTCGGTAGGATTTCTTCAGCCAGTGGGGAATAAATAACGA
ACTGAAACTCGATGGAGATAGATATTCTAAGAGTTTTTGGGGATTTCAAT
TCTTTTGCTTTCCAGTCAGAAAATTCAGTGGGGATGGGAAAAATAGCATA
ATATTTTGCAGTGAGAATTGGTTTATTTGATTATTTTCAGTGGGGACAAA
AAGTGGAGGATAATTTTACACCGGGAACGATGTCTTGGACAAATTTTCCA
GTGGGAAGAAGTCCCAGTGGGTCTGTGAAAAGGGGGTATTTTAGACAGCG
AGGCTCACTTTGGTAAAGGCTAACGAAGAGCATGTTTGACAGAAGGAAAT
CTGATATTCAAATTCCACACTCAAAGAAAATGTTTCTTTATTTTTCAGGG
TGTGTATTTGTTGGTTGGACACGTCATCATGGATGTCAATGTTCGACAAG
ATATCGACACGCGATTTGATTGGCTCAAACAAAAGACTGTTCGAATGAGG
AAATTTTCACAAGAATCGACGCGAACGAGAACAAGCACCATGTGAATAAA
TTGCGAGACAAACTTAATCACTTTCTTGAAGATTTGAGGATTTAGCTAAG
CTACGCCAAAGTCATTTTATTTGAATTCGATATAAACATGTGGTAGAAAC
TTAGTAGAAACAAGTATGAACTTCGGCCTGGATTAAAAACAAACCTATTT
ACTTTACTTAGATTTCTGTTGGGCCTTGGGCCTACATAATGAGATTTGTC
TTATCGAAATTTTTCATCACTTAGGACTTGTTCGTTAAACTTGAAATGAA
AACTTTTGTTTAGTAAAATGTTTGGGCATTTATCTTTTTCAAAGGGGCGT
TTGAAATAAGGGGCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046174-exon-scaffold_106-1575043694:333320..333374 | TCONS_00046174-exon-scaffold_106-1575043694:333320..333374 | Clytia hemisphaerica | exon |
| TCONS_00046174-exon-scaffold_106-1575043694:331659..332126 | TCONS_00046174-exon-scaffold_106-1575043694:331659..332126 | Clytia hemisphaerica | exon |
| TCONS_00046174-exon-scaffold_106-1510915933:333320..333374 | TCONS_00046174-exon-scaffold_106-1510915933:333320..333374 | Clytia hemisphaerica | exon |
| TCONS_00046174-exon-scaffold_106-1510915933:331659..332126 | TCONS_00046174-exon-scaffold_106-1510915933:331659..332126 | Clytia hemisphaerica | exon |
| TCONS_00046174-exon-scaffold_106-1491911889:333320..333374 | TCONS_00046174-exon-scaffold_106-1491911889:333320..333374 | Clytia hemisphaerica | exon |
| TCONS_00046174-exon-scaffold_106-1491911889:331659..332126 | TCONS_00046174-exon-scaffold_106-1491911889:331659..332126 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_106 | supercontig | scaffold_106:331659..333374 - |
Blast
The following BLAST results are available for this feature:
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