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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046008 ID=TCONS_00046008|Name=TCONS_00046008|organism=Clytia hemisphaerica|type=transcript|length=1193bp
atttTTTCTCTATCTTTGATGTTGGCTCTGTTTTTCTTGTGCAGGGTGTA
CGTAGCCACGTTTTGGGAAAAACGACCATATTGTGTATGATTCGTCACTG
CTTAAAGCTATTGGTTGAAACAACTCATTAACTGATTTTTTGGAGTCATT
AATATAGTATCATTTGTTTCCGTGAGTGTtcgaaacaacaacaaaaaagt
aatCGATAATTGCAAGTGTGGTTCTTTTTCATTTGACGATCCACCAGAAT
GACAAGACAAGGCAAGATAGTGCAACCGGCTCACGGTGATCACACGGCAA
GGGATAAACACGTGAAAACGAAAGCGGAGCCGGTGGACACACAACTGCAG
CCAGTTGACCCTCTACAACAACAAGAAGAAGGTCATGTCATCTCTCCACT
GACTCGTTGCATGACTAGAGAGGAGATCGAAATATTGAGCAATAATTCAA
CATCACCTTTGGAAAGAGATTTGATTGAATACCTTAGaatgcaacaacaa
caacaacagcaacagcaacagcaacagcaacagcaacagcaacagcaaca
acaacagaaTCACCACCACCAACAAAATTGTCAACAAAATGGAGCAACAC
CTTTTCAACCAATCACCAACCAGCATCAGCAACAACAAAGAAAATCTTTC
GGTTATGGAAACAGTCCTAATCTGACCAGATCTAATTCTACACCAATGAA
GGCTTACCAGACCCTCTCCAATGCATCGACTGCACAGAATCTCTCCAGCC
CCACAGACATCGCAAATTACATGAATGGACAGAACCCAATGGATGCAAGC
AAACTTCCTCATTTTCCAATGCCTATTTCTCAaatcaagaaagaaaatga
ttttgaccAAGGTAAGTGCTTCTTTACTTGCCAGAAGCTTCTTTAGTTAA
CAGTTGGGAGTTGATTTAGTTGATCGATTAGCAGATATTGCCAATAATTA
AATTCGCTGTTTATTTATTTCACAAAGATTTTTAGTTTCAAAGGTTTCAC
TTTAGTTAGCTCTTTATTTTAGCAGCAAATCGAGTTGACAAAACATTCTG
CTTTCCACGTTgtcttaaaaatctttgttgataatttttactttcatttt
ctcaAAAGAAACAAACTTTCCAGTTTCAGTTCTCAAATTATGTAACCTTT
CAGCCAAGAGCTTGTTCATAAACATAAACCAAATTATCTAGCC Run BLAST on NCBI transcript from alignment at scaffold_105:602073..603265+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046008 ID=TCONS_00046008|Name=TCONS_00046008|organism=Clytia hemisphaerica|type=transcript|length=1193bp|location=Sequence derived from alignment at scaffold_105:602073..603265+ (Clytia hemisphaerica)
atttTTTCTCTATCTTTGATGTTGGCTCTGTTTTTCTTGTGCAGGGTGTA
CGTAGCCACGTTTTGGGAAAAACGACCATATTGTGTATGATTCGTCACTG
CTTAAAGCTATTGGTTGAAACAACTCATTAACTGATTTTTTGGAGTCATT
AATATAGTATCATTTGTTTCCGTGAGTGTtcgaaacaacaacaaaaaagt
aatCGATAATTGCAAGTGTGGTTCTTTTTCATTTGACGATCCACCAGAAT
GACAAGACAAGGCAAGATAGTGCAACCGGCTCACGGTGATCACACGGCAA
GGGATAAACACGTGAAAACGAAAGCGGAGCCGGTGGACACACAACTGCAG
CCAGTTGACCCTCTACAACAACAAGAAGAAGGTCATGTCATCTCTCCACT
GACTCGTTGCATGACTAGAGAGGAGATCGAAATATTGAGCAATAATTCAA
CATCACCTTTGGAAAGAGATTTGATTGAATACCTTAGaatgcaacaacaa
caacaacagcaacagcaacagcaacagcaacagcaacagcaacagcaaca
acaacagaaTCACCACCACCAACAAAATTGTCAACAAAATGGAGCAACAC
CTTTTCAACCAATCACCAACCAGCATCAGCAACAACAAAGAAAATCTTTC
GGTTATGGAAACAGTCCTAATCTGACCAGATCTAATTCTACACCAATGAA
GGCTTACCAGACCCTCTCCAATGCATCGACTGCACAGAATCTCTCCAGCC
CCACAGACATCGCAAATTACATGAATGGACAGAACCCAATGGATGCAAGC
AAACTTCCTCATTTTCCAATGCCTATTTCTCAaatcaagaaagaaaatga
ttttgaccAAGGTAAGTGCTTCTTTACTTGCCAGAAGCTTCTTTAGTTAA
CAGTTGGGAGTTGATTTAGTTGATCGATTAGCAGATATTGCCAATAATTA
AATTCGCTGTTTATTTATTTCACAAAGATTTTTAGTTTCAAAGGTTTCAC
TTTAGTTAGCTCTTTATTTTAGCAGCAAATCGAGTTGACAAAACATTCTG
CTTTCCACGTTgtcttaaaaatctttgttgataatttttactttcatttt
ctcaAAAGAAACAAACTTTCCAGTTTCAGTTCTCAAATTATGTAACCTTT
CAGCCAAGAGCTTGTTCATAAACATAAACCAAATTATCTAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046008-exon-scaffold_105-1491911889:602073..603265 | TCONS_00046008-exon-scaffold_105-1491911889:602073..603265 | Clytia hemisphaerica | exon |
| TCONS_00046008-exon-scaffold_105-1510915933:602073..603265 | TCONS_00046008-exon-scaffold_105-1510915933:602073..603265 | Clytia hemisphaerica | exon |
| TCONS_00046008-exon-scaffold_105-1575043694:602073..603265 | TCONS_00046008-exon-scaffold_105-1575043694:602073..603265 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_105 | supercontig | scaffold_105:602073..603265 + |
Blast
The following BLAST results are available for this feature:
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