TCONS_00045981 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045981
Unique NameTCONS_00045981
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2737

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045981 ID=TCONS_00045981|Name=TCONS_00045981|organism=Clytia hemisphaerica|type=transcript|length=2737bp
GAAGAAATTTCTTATAACTTTACTAATGAAaacaatgtttttcatttttt
taaattgtcattcaccaatgttttacagaccctcttgataattaaaagtt
tttaatcgtgaacgataaatgcagcagcagaaacatcggctaagaggaaa
tccaaatttcacgagtttgtaattaaaaaagttaaatttcatatcaaatt
ttaatgtcagggacagagatatccagctccgctataacatatccctgttt
tgagtggtttcatttttcgatttcaagccaacatcttagcaacggggtgc
ttgcccatagttacaggggtttgtgcaaaaaactactGAAAagtaaacat
agaaaattttccaaatcccccatttcgattaatgcaatgaaatatgaaac
ttttctatgtttcccttttttgcacctatgtttcaaaatgaaaatattta
ttcaatgattttttacggcactttgttgacaatctaactctcgcatcaaa
ttcctgctttcttcagtaaattgaagatgagaaaaaacgtaagccacgga
tcacgaattgaaacaaatatataaagggtgggattttacagccgtccgtc
gtgcaaggcactgaaaggccacaggtgccaaaaacaagggccgtttgaaa
tgtggcaacctcattggtggaaatttgataaacagctgcgaaggagcgct
gggaaacaatcagtagaagagaccactgtcgtttttgttgcagatttcga
tataaacttctgtcagggattacttgtcaatgcacatgtacacatgtgtt
gtgtcaacttgtcagcattgtattgttgtaaagggaaagataaaagaggt
aagactagcctagtttctaatcctgataatAGGAGTTAAGCTTAGACtga
atatgaaagcttgaatcactgattgaaaaaaaattattcctctgtgacca
ctaagccaagaaaaacagtttcaacctttctatcaatttcagctgataaa
aagagtgtcggaattagaggaggggtgtcgacattagaccaaatgATATT
TAAGTTTTGTATTTctgttttttaaaaagaaaatcaagagTTTAAGAAAA
ATCATTATCTGATTTATTTGACtagtctgtttttttttctattctagACC
CTAGATAATGCTAAAAAATATGAAGGAAAGATCTCGTAAATGAACTGAAA
TGAATGGCTTTTccttgtttgaaaattttttgtattttaacttcaatttt
tattgaaaaaggtATTAAGGTATCCAAATGTAACATTTGATTTCAAATCT
GCATTATAAATATGTATATTTACTTTCAGTATGATATGTAAATAAATGTT
TCAACAATCAAAACGGCTAAAAATGAATGACGAAAGCTCAACTGAGATGC
CATCTTCATCATCTGTCGCTGATGGGGTAGTCCCTGAGGCTGACAATGAA
GAGTTCCTTGCTACTGGAGTTCCCGCAAGTGTTACTATTGCACTGCATCC
ACTTGTTATCATGAATATATCTGATCATTATACCCGTATCAAGGCCCAAG
AAGGAGTCGTGCCTAAAGtttATGGAGCACTGTTGGGGAAACAGAATGGA
AGAAATTTGGAGCTTTACAATTCATTTGAATTACAACATTCGGAGAATGC
TGAGGGATGTGTTATTGAAatggaatattttcaaaacaaagaggAACAGT
TTCGTCAGGTGTTCAGTGATTTGGATTTTCTTGGATGGTATACTGTTGGT
TCATCCTCTGCTACTGAGCAAgacattaaaatacaaaaacagatGATTAC
TGTCAACGAAAGCTCATTACTTCTAAAACTGGATCCTTTATCCAAATCAT
CAAATCTTCCGATTACGATTTACGAATCTATGATTGACATCATTGACCAA
CAGCCTAGAATGCTCTTCATCAAAGTTCAATACACTTTAGTGACTGAAGA
AGCAGAGAGGATAGGGGTAGACCACGTTGCTAGGGTTTCCACTGCCGCTC
AATCAGAGATCTCTCAAGTGTCGGAGTACATGCAGGTTCAACAAAGTGCG
ATCAAGATGTTGTCTTCAAGAGTGGATATCATTCTCCAGTATGTCAGCGC
TGTCAAAGATGGACATATTCCGTTAGATCAGAGTATTATGCGTCAATGTC
TGAGTCTTTGTCAACGCTTGCCGGTGCTCAACACCAAAGAATTTCAAGGA
GAATTTCACGAACAATGCAGTGACATCACATTGATGTCCTACTTAGCAAC
CATCACTAAGGGATGCAGTATCACTAATGAGcTGATCAGCAAGTTCAATG
TAATCTATGACAAACACGGAAGCAGTCGGAGAATGCGTGGATTATTCTTC
TAAAGCGACAAAGAGGAAGATAATGAGAAAGTTGGTGTTCTTGAACTGAT
GGCCATTCTGGTGGAATCAGGACAGTTTTGTTTTCCTTAATTGCAGTAGG
CTTGATACCCGATCGAATTCATGCTTACGATTTGCAGCAACTGTTGTAGA
GTATGAGATGACCTGAACGCCGGAGGAAAACGAAAATATTTCCTTTGAAC
ACTTTATAAAAGAAAGATGAAAAGACTGGAACACTTTTTGTacataatgt
taatttttcaacatttttaattattgttaagaatttctgatttctttcaa
CAACAAACATTATATTTTCCGTTCAAgtttgaaagtgaaaaataagtgAA
AAGATTCATTGAAGATTTCGGATAGGTTTCGGTAAAC
Run BLAST on NCBI

protein sequence of TCONS_00045981-protein

>TCONS_00045981-protein ID=TCONS_00045981-protein|Name=TCONS_00045981-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MFQQSKRLKMNDESSTEMPSSSSVADGVVPEADNEEFLATGVPASVTIAL
HPLVIMNISDHYTRIKAQEGVVPKVYGALLGKQNGRNLELYNSFELQHSE
NAEGCVIEMEYFQNKEEQFRQVFSDLDFLGWYTVGSSSATEQDIKIQKQM
ITVNESSLLLKLDPLSKSSNLPITIYESMIDIIDQQPRMLFIKVQYTLVT
EEAERIGVDHVARVSTAAQSEISQVSEYMQVQQSAIKMLSSRVDIILQYV
SAVKDGHIPLDQSIMRQCLSLCQRLPVLNTKEFQGEFHEQCSDITLMSYL
ATITKGCSITNELISKFNVIYDKHGSSRRMRGLFF
Run BLAST on NCBI

transcript from alignment at scaffold_105:197192..206145+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045981 ID=TCONS_00045981|Name=TCONS_00045981|organism=Clytia hemisphaerica|type=transcript|length=8954bp|location=Sequence derived from alignment at scaffold_105:197192..206145+ (Clytia hemisphaerica)
GAAGAAATTTCTTATAACTTTACTAATGAAaacaatgtttttcatttttt
taaattgtcattcaccaatgttttacagaccctcttgataattaaaagtt
tttaatcgtgaacgataaatgcagcagcagaaacatcggctaagaggaaa
tccaaatttcacgagtttgtaattaaaaaagttaaatttcatatcaaatt
ttaatgtcagggacagagatatccagctccgctataacatatccctgttt
tgagtggtttcatttttcgatttcaagccaacatcttagcaacggggtgc
ttgcccatagttacaggggtttgtgcaaaaaactactGAAAagtaaacat
agaaaattttccaaatcccccatttcgattaatgcaatgaaatatgaaac
ttttctatgtttcccttttttgcacctatgtttcaaaatgaaaatattta
ttcaatgattttttacggcactttgttgacaatctaactctcgcatcaaa
ttcctgctttcttcagtaaattgaagatgagaaaaaacgtaagccacgga
tcacgaattgaaacaaatatataaagggtgggattttacagccgtccgtc
gtgcaaggcactgaaaggccacaggtgccaaaaacaagggccgtttgaaa
tgtggcaacctcattggtggaaatttgataaacagctgcgaaggagcgct
gggaaacaatcagtagaagagaccactgtcgtttttgttgcagatttcga
tataaacttctgtcagggattacttgtcaatgcacatgtacacatgtgtt
gtgtcaacttgtcagcattgtattgttgtaaagggaaagataaaagaggt
aagactagcctagtttctaatcctgataatAGGAGTTAAGCTTAGACtga
atatgaaagcttgaatcactgattgaaaaaaaattattcctctgtgacca
ctaagccaagaaaaacagtttcaacctttctatcaatttcagctgataaa
aagagtgtcggaattagaggaggggtgtcgacattagaccaaatgATATT
TAAGTTTTGTATTTctgttttttaaaaagaaaatcaagagTTTAAGAAAA
ATCATTATCTGATTTATTTGACtagtctgtttttttttctattctagACC
CTAGATAATGCTAAAAAATATGAAGGAAAGATCTCGTAAATGAACTGAAA
TGAATGGCTTTTccttgtttgaaaattttttgtattttaacttcaatttt
tattgaaaaaggtATTAAGGTATCCAAATGTAACATTTGATTTCAAATCT
GCATTATAAATATGTATATTTACTTTCAGTATGATATGTAAATAAATGTT
TCAACAATCAAAACGGCTAAAAATGAATGACGAAAGCTCAACTGAGATGC
CATCTTCATCATCTGTCGCTGATGGGGTAGTCCCTGAGGCTGACAATGAA
GAGTTCCTTGCTACTGGAGTTCCCGCAAGTGTTACTATTGCACTGCATCC
ACTTGTTATCATGAATATATCTGATCATTATACCCGTATCAAGGCCCAAG
AAGGAGTCGTGCCTAAAGGTTTGTAATGTTACTAATTacatatattttca
tttgttaaaatttaaaatccataTAAAGCTCTACCCAGTGTATCGAGCAC
TGTTTCAACATTTGTTTTCAACAATGGTATAATGTTACTATTATCATGTT
TTGATCATCATTTGCTAATAGGTTTTTGCGATCATTTCTTAAATGAAAGA
TGTATAAAAGAGCATTTAGAACAGTTCTATTTGTCAATTTGAGAATTGGT
TAACaccaaaaatgaaatgaaaattatacCCAAAAACaagtctgttaaat
gacgcgccttacgcgcccacacgccttacgcgcccacgcNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTTTCCGTCCAAG
ATCTGATCAACCCAtttttattaggcacctgagagtaaatTCACGTgaaa
aaagtctgaaatttGGTCCGTGAATTAATCAATTGTAACAAGACGATACT
ATAATCCCAAGTACACCACAATCGATTACATTTTTAAACTAGCATTAACT
ATCGCTATAAGGTAGTAATACTGCAAGGCACGTCAAAAATTTAGGACGCG
TTGATAATAAGGCGCGTAAGAGGGCGCGTCAAAATTCAgacgcgtgggcg
cgtaaggtgcatgggcgcgtaaggcgcgtcatttaacagactcaAATAGG
TTAAGTTTGTTTTAGGATTTTAAATTCAAGCACAAGAACCGTTTTACAAT
AATTATAAGATACACATGCTCAATAAGCGAATCATATAGCTATGATGAAA
TATGAATTGGACTCTTCTAAGACTGGTTTGTTTAAAGCCCGGGGGCACTC
GACTTAAAAAGATTGTATGTGTGACCCAAAATTAGCCTTGGAAATTGTTG
ACCATTTGTTGACCAAGGTAAAATgtggtcagattttccaaattttacac
ccttagagtacAATTCTTTCCAAGGCTTGGAAAAAGGACCCTTAAGGGCT
GCACGTACGGTAGGATGTTCACCTTTAGTGCCCCTCCCCCCTGGGGTTTA
AAATAGTAACAgccttttttcatttcagtttATGGAGCACTGTTGGGGAA
ACAGAATGGAAGAAATTTGGAGCTTTACAATTCATTTGAATTACAACATT
CGGAGAATGCTGAGGGATGTGTTATTGAAatggaatattttcaaaacaaa
gaggAACAGTGTAAGTAGATTACCTTATAAAATTTTTTACTTCCGTAAAA
TGACACATAATTCACGTTTTAGCCAAATAATAACTATTAGTTTTGCAGAA
GATAAAAGCTTTTAATATCATTGAGCTTGGtttagtttttcaatttttcg
gagTGCAAGATAAGTGACATCATAACATTATGAGGTTTTTGAACAAGTAT
TTTGCAAACATGAGTTTACCTGCCATCTTCCCTCCTTTCTCTTAGTTCGT
CAGGTGTTCAGTGATTTGGATTTTCTTGGATGGTATACTGTTGGTTCATC
CTCTGCTACTGAGCAAgacattaaaatacaaaaacaggTTTGTGCAATGC
TCTCCAAACCAGTGCTGCAACTTTTCCGTCTGTAGACAGAAATCTATCCA
GTTGAGAAACAAATTCACCATTTATGGCTTGCCATTAATTATGAAGATCT
TCCCCTTCACCTTTTTTCATATTAGCAAAGCTCTAACCCGACCTTAAGAA
TGAGAGGGGTTTCACGTATACCTTGAATAATTCTCTTAATCTAACATAAA
GTAGACTTGGAGAACTTTGGACTTGAAGAACTGTCCTTTGGAATCCTTTT
AGTTCCAAAGTTTTCACTAGCTTTTcactagtttttttttaagtgcaGTT
GAACTTatttgtttctctttttttagatGATTACTGTCAACGAAAGCTCA
TTACTTCTAAAACTGGATCCTTTATCCAAATCATCAAATGTAAGATCTCT
TTTAAAGTAACCACATTTGACTTATCTTGAACAGTTCTCGTTTATCATTG
TGACAACAGGTGACAATGATTTCAACTTGCATACTATCAAATGACCTTTT
TGAGATCACTGAAAGACATTTCTCACGAAAGGGCTAcaagaaaaataaca
ttttggTAACAACCATCATGAAAATGTTCCCTATAAAATCACTTCCCAAA
CACTCCCCCATTCTATTTCTTTCTTCAGCTTCCGATTACGATTTACGAAT
CTATGATTGACATCATTGACCAACAGGTActgaaaaattctaaatatttg
AGCCGCTCAACTGAGTTATACAAGGGATTTTTCTAAACACTTTTTTTATG
TTCGTGTACCGGCCAAAATACACAatccaaaatataaaatatattttcta
gcaaaattaaacttgtttgttgtttaCAAACAAAAATCTCTAATATTATC
TACATATTCAAAATATCTTTGGAGCTGNTTGGTTAcaaacaaaaatcttt
tatattatctacatattcaaaatatttttggagcTCCACCTTCTGAACAC
CAACCAAACCCCCAGCTTTATAAATATACAGCTTTGCGGAAAAAATTCCC
TTTTAAGCATATTAGAAACTCAATCTAAGTTAACAAAAACGGtccagctc
aaagtgcttagaaaaagcTCTGCTTATAGTTATACCCATATCTATGAATA
TGATCTTAGCTTAATTTCAAATtcccaaaaaaaatgttttctgcaaagta
tcatttttttttcaagcaaggtTTATTTATATGCTCTTCTTTTCTTCTCT
CCTAGCCTAGAATGCTCTTCATCAAAGTTCAATACACTTTAGTGACTGAA
GAAGCAGAGAGGATAGGGGTAGACCACGTTGCTAGGGTTTCCACTGCCGC
TCAATCAGAGATCTCTCAAGGTAAGATAAACGAGCCTGTATGGTATGTGT
ACTCACAAGGCAAAAGAACAAGTTTATAAAATGTTTGTTTAGGATGTTTA
GTAGaattctataattcgaatataaagtaaataaatagacctgttcgcct
ttccatccgacatcttgaattgtatgcaacaatcactgacctttatatat
accAAACTTTGTATAAACAACAACAACTTTTCTGTTTACTTATGTTATTA
AcgttttgaaactttttctgtTGATAATTTTCAGTATCAGACCGTCCTGC
TAAAGCCTGTCCTATACATTTTTCCCTGAATAATATATCTTATTTGTATA
TTTAAGTGTCGGAGTACATGCAGGTTCAACAAAGTGCGATCAAGATGTTG
TCTTCAAGAGTGGATATCATTCTCCAGTATGTCAGCGCTGTCAAAGATGG
ttagttaaaattttattttacgtAATAATCTTTCAAATAGTATTACAAAT
ACATTTAGTGAAAGAATTGGATAAACAAAGGAAAAACAATAACCtagaca
aagaaaattgataaaagtagCATGCTGGACACACTAGGCCTGAAAAAAAG
ACGTTCTAATGAGATACAAATGGAAGATGGAAAAACCCTGAGAAGCACtg
tatttaaaatataaaaaaaaaagatcagttAAAATGCCATATTCAGCACT
CTTTCTACTTATCAGGTCTTTGCTAAGCGACTTTCAAtgcttttctcaaa
aatgacaCTTTTTTCAAAGATGGTCAAATGAGTCTTCATTGCTACTAAct
tcttttttattcaaatctcTCAAAGAAATTACTTCAATTACAAATTGTCA
TGGTTCATCGCTAGTTTATATTTTCTTCAGTGCATATGACTTCATTGTAT
TTCACCGACTCAAGACTTGAATATTGAGTGTATTTATTATTAAAGGATAA
CTCTTACAAGAATACTATCAGGGCGATATTTCAAGTTTATATCACTAGAG
ATATGAATGCCTATTCTCTACGAATGAAAACTTTTATATAAAGCGGGTGG
GTTCCTTTACGTGTAAGTAAGTGTAGCGACTGTACTGTAGTGGTAGAGCA
tacggctacggtgcgcaaggtagTAGGGTGGCGCTCtctcctaccttcgg
gtagatagctatcaaaaTAGGAGCCTTTGGGTCGCTTCCGACGACTGCAC
TTGCAAACTTACTACTGCTACTTACGAAAGTTCAATAAATAACTCACATA
ACTCACATAAATAGTTCACATCGAAAAAATTTGCATatgcaatgaaaaaa
atcttcaatttaaATTTCCAGGACATATTCCGTTAGATCAGAGTATTATG
CGTCAATGTCTGAGTCTTTGTCAACGCTTGCCGGTGCTCAACACCAAAGA
ATTTCAAGGAGAATTTCACGAAGTAAGAGATTGAtcatatatattatttt
tagaGCAAATAAAACAGGCAAGGCTCAACAGAGTTGTATCTTTATTGCAA
GAAGAGGATCTACTTTAATCGtaaaaattttagcgagactaattttagcg
tatattagcgagccaggaaaatcttgattttttttggatttattttagcg
aatcacgatttcagaaaatttcgcgtggataaattttagcgaatactcgt
attacatcattgattgaattcgttttatagcatttctttgcactgaaacc
cttcctattgataaaaatgtatcaaggcaatataaccagaaatttcgcgt
ggataaattttagcgaatactcgtattacatcattgattgaattcgtttt
atagcatttctttgcactgaaacccttcctattgataaaaatgtatcaag
gcaatataaccagaaatttcgcgtggataaattttagcgatctgatGATT
CGGCGTGTTCtggcgagatttattttagcgaaaatagggaaaactcgtta
aaacgctaaaattagtctcgctaaaatttctacgattaaagtaagtagaa
aaaatgaactgtataaaaataaaacattgatagaatttttctcaaagccT
CGGGACATTTTTCGTCAATCGGAAatattaaatataattttcttgTCCAT
TGTTTTGTGGTCAAGGTCAGGGTTGTCATTTATTTCATCGAGAATTTTAA
TAATTATTGTGATAATTGCCACGCTCACCCACTGTTTAATTAGTGCTAAT
TACAAATTTCATAGCAACCAAGAATAAtttgtatatttaaaaaaaaaaag
aattaaatatATAAAGCCAGAGATAGCGTGATccaatttaaaattaaaac
aaaaaacacattttcttTCAACAATATTTCGATAATGTATATAATTTTAT
GAATATGTATCCAatgaaacttatttcaaatttttcatcaagAAATTAGT
AGTAATGCCCTTTCTTTCTTCTTCCATTTCAGCAATGCAGTGACATCACA
TTGATGTCCTACTTAGCAACCATCACTAAGGGATGCAGTATCACTAATGA
GGTATCTTTTCGATTTACCCGAGACTTCAAGAATCTGCACATGATTTATT
ACACTaggaccatgttcagacgttacggttccgtatcATTCAGAAACAAA
ACgattccgaaacaagtgtgaacgtcaaaattcgaaacagGAAAAAAGAG
ACAGattgaaacggtttcgctccactattttcagTGGAACGGAACTGCTC
TGTTTTCTTTCTTCGAAACGTTctgaaaccaatatgaacactctcgatcc
gtcTGAACATGTTCTAGGATTAGATTGAACAATAGGTTTTGTAGTATTGT
ATTGTAGAATCTCTGCCTCAAAACCTGTTTAAAATAAAGACTGGTAGACA
CTGATACTGCTAGACACTGTTTTCCGTCCTTCTGCGTCCTCTGAACTCTT
TTCAGCTCAAAACCAAAGATGGTTCATCAAAGATAAAGAAAGGTCACTGA
ATTGCAGTCTGCAGAGATTCCCTGGCCTTGAGACCTCCATGGGAGATAGT
TATAACTCTTATGAATGTGTCTCACTTCAAGCAAAAATACTCCCTTAGGG
TATTTACGAAAGGAATACAAGTGATTTTTGCTTGTCAGATTACCACTGgt
gttttttaaagaatttcggTCCATTTCAAGGACAGTTTtttgcatacacg
ttttttataagaacatccagaatttttaaagcctttggatgtccttttga
gttttaagcctgaaaatgttcttaacatgtttttattttcattaatttta
agTCCTGAGAGATTGGGTGtttacaaagccttaaaaatattcttaacttg
ttcttaaaatattcttatatagtttgttcttataaaaacatgtatttttt
gGTAAAGGATTTGCGAGTTTACAAGCAAttgtgttttattttctttagcT
GATCAGCAAGTTCAATGTAATCTATGACAAACACGGAAGCAGTCGGAGAA
TGCGTGGATTATTCTTCTAAAGCGACAAAGAGGAAGATAATGAGAAAGTT
GGTGTTCTTGAACTGATGGCCATTCTGGTGGAATCAGGACAGTTTTGTTT
TCCTTAATTGCAGTAGGCTTGATACCCGATCGAATTCATGCTTACGATTT
GCAGCAACTGTTGTAGAGTATGAGATGACCTGAACGCCGGAGGAAAACGA
AAATATTTCCTTTGAACACTTTATAAAAGAAAGATGAAAAGACTGGAACA
CTTTTTGTacataatgttaatttttcaacatttttaattattgttaagaa
tttctgatttctttcaaCAACAAACATTATATTTTCCGTTCAAgtttgaa
agtgaaaaataagtgAAAAGATTCATTGAAGATTTCGGATAGGTTTCGGT
AAAC

Coding sequence (CDS) from alignment at scaffold_105:197192..206145+

>TCONS_00045981 ID=TCONS_00045981|Name=TCONS_00045981|organism=Clytia hemisphaerica|type=CDS|length=10080bp|location=Sequence derived from alignment at scaffold_105:197192..206145+ (Clytia hemisphaerica)
ATGTTTCAACAATCAAAACGGCTAAAAATGAATGACGAAAGCTCAACTGA
GATGCCATCTTCATCATCTGTCGCTGATGGGGTAGTCCCTGAGGCTGACA
ATGAAGAGTTCCTTGCTACTGGAGTTCCCGCAAGTGTTACTATTGCACTG
CATCCACTTGTTATCATGAATATATCTGATCATTATACCCGTATCAAGGC
CCAAGAAGGAGTCGTGCCTAAAGtttATGGAGCACTGTTGGGGAAACAGA
ATGGAAGAAATTTGGAGCTTTACAATTCATTTGAATTACAACATTCGGAG
AATGCTGAGGGATGTGTTATTGAAatggaatattttcaaaacaaagaggA
ACAGTTTCGTCAGGTGTTCAGTGATTTGGATTTTCTTGGATGGTATACTG
TTGGTTCATCCTCTGCTACTGAGCAAgacattaaaatacaaaaacagatG
ATTACTGTCAACGAAAGCTCATTACTTCTAAAACTGGATCCTTTATCCAA
ATCATCAAATCTTCCGATTACGATTTACGAATCTATGATTGACATCATTG
ACCAACAGCCTAGAATGCTCTTCATCAAAGTTCAATACACTTTAGTGACT
GAAGAAGCAGAGAGGATAGGGGTAGACCACGTTGCTAGGGTTTCCACTGC
CGCTCAATCAGAGATCTCTCAAGTGTCGGAGTACATGCAGGTTCAACAAA
GTGCGATCAAGATGTTGTCTTCAAGAGTGGATATCATTCTCCAGTATGTC
AGCGCTGTCAAAGATGGACATATTCCGTTAGATCAGAGTATTATGCGTCA
ATGTCTGAGTCTTTGTCAACGCTTGCCGGTGCTCAACACCAAAGAATTTC
AAGGAGAATTTCACGAACAATGCAGTGACATCACATTGATGTCCTACTTA
GCAACCATCACTAAGGGATGCAGTATCACTAATGAGcTGATCAGCAAGTT
CAATGTAATCTATGACAAACACGGAAGCAGTCGGAGAATGCGTGGATTAT
TCTTCTAAATGTTTCAACAATCAAAACGGCTAAAAATGAATGACGAAAGC
TCAACTGAGATGCCATCTTCATCATCTGTCGCTGATGGGGTAGTCCCTGA
GGCTGACAATGAAGAGTTCCTTGCTACTGGAGTTCCCGCAAGTGTTACTA
TTGCACTGCATCCACTTGTTATCATGAATATATCTGATCATTATACCCGT
ATCAAGGCCCAAGAAGGAGTCGTGCCTAAAGtttATGGAGCACTGTTGGG
GAAACAGAATGGAAGAAATTTGGAGCTTTACAATTCATTTGAATTACAAC
ATTCGGAGAATGCTGAGGGATGTGTTATTGAAatggaatattttcaaaac
aaagaggAACAGTTTCGTCAGGTGTTCAGTGATTTGGATTTTCTTGGATG
GTATACTGTTGGTTCATCCTCTGCTACTGAGCAAgacattaaaatacaaa
aacagatGATTACTGTCAACGAAAGCTCATTACTTCTAAAACTGGATCCT
TTATCCAAATCATCAAATCTTCCGATTACGATTTACGAATCTATGATTGA
CATCATTGACCAACAGCCTAGAATGCTCTTCATCAAAGTTCAATACACTT
TAGTGACTGAAGAAGCAGAGAGGATAGGGGTAGACCACGTTGCTAGGGTT
TCCACTGCCGCTCAATCAGAGATCTCTCAAGTGTCGGAGTACATGCAGGT
TCAACAAAGTGCGATCAAGATGTTGTCTTCAAGAGTGGATATCATTCTCC
AGTATGTCAGCGCTGTCAAAGATGGACATATTCCGTTAGATCAGAGTATT
ATGCGTCAATGTCTGAGTCTTTGTCAACGCTTGCCGGTGCTCAACACCAA
AGAATTTCAAGGAGAATTTCACGAACAATGCAGTGACATCACATTGATGT
CCTACTTAGCAACCATCACTAAGGGATGCAGTATCACTAATGAGcTGATC
AGCAAGTTCAATGTAATCTATGACAAACACGGAAGCAGTCGGAGAATGCG
TGGATTATTCTTCTAAATGTTTCAACAATCAAAACGGCTAAAAATGAATG
ACGAAAGCTCAACTGAGATGCCATCTTCATCATCTGTCGCTGATGGGGTA
GTCCCTGAGGCTGACAATGAAGAGTTCCTTGCTACTGGAGTTCCCGCAAG
TGTTACTATTGCACTGCATCCACTTGTTATCATGAATATATCTGATCATT
ATACCCGTATCAAGGCCCAAGAAGGAGTCGTGCCTAAAGtttATGGAGCA
CTGTTGGGGAAACAGAATGGAAGAAATTTGGAGCTTTACAATTCATTTGA
ATTACAACATTCGGAGAATGCTGAGGGATGTGTTATTGAAatggaatatt
ttcaaaacaaagaggAACAGTTTCGTCAGGTGTTCAGTGATTTGGATTTT
CTTGGATGGTATACTGTTGGTTCATCCTCTGCTACTGAGCAAgacattaa
aatacaaaaacagatGATTACTGTCAACGAAAGCTCATTACTTCTAAAAC
TGGATCCTTTATCCAAATCATCAAATCTTCCGATTACGATTTACGAATCT
ATGATTGACATCATTGACCAACAGCCTAGAATGCTCTTCATCAAAGTTCA
ATACACTTTAGTGACTGAAGAAGCAGAGAGGATAGGGGTAGACCACGTTG
CTAGGGTTTCCACTGCCGCTCAATCAGAGATCTCTCAAGTGTCGGAGTAC
ATGCAGGTTCAACAAAGTGCGATCAAGATGTTGTCTTCAAGAGTGGATAT
CATTCTCCAGTATGTCAGCGCTGTCAAAGATGGACATATTCCGTTAGATC
AGAGTATTATGCGTCAATGTCTGAGTCTTTGTCAACGCTTGCCGGTGCTC
AACACCAAAGAATTTCAAGGAGAATTTCACGAACAATGCAGTGACATCAC
ATTGATGTCCTACTTAGCAACCATCACTAAGGGATGCAGTATCACTAATG
AGcTGATCAGCAAGTTCAATGTAATCTATGACAAACACGGAAGCAGTCGG
AGAATGCGTGGATTATTCTTCTAAATGTTTCAACAATCAAAACGGCTAAA
AATGAATGACGAAAGCTCAACTGAGATGCCATCTTCATCATCTGTCGCTG
ATGGGGTAGTCCCTGAGGCTGACAATGAAGAGTTCCTTGCTACTGGAGTT
CCCGCAAGTGTTACTATTGCACTGCATCCACTTGTTATCATGAATATATC
TGATCATTATACCCGTATCAAGGCCCAAGAAGGAGTCGTGCCTAAAGttt
ATGGAGCACTGTTGGGGAAACAGAATGGAAGAAATTTGGAGCTTTACAAT
TCATTTGAATTACAACATTCGGAGAATGCTGAGGGATGTGTTATTGAAat
ggaatattttcaaaacaaagaggAACAGTTTCGTCAGGTGTTCAGTGATT
TGGATTTTCTTGGATGGTATACTGTTGGTTCATCCTCTGCTACTGAGCAA
gacattaaaatacaaaaacagatGATTACTGTCAACGAAAGCTCATTACT
TCTAAAACTGGATCCTTTATCCAAATCATCAAATCTTCCGATTACGATTT
ACGAATCTATGATTGACATCATTGACCAACAGCCTAGAATGCTCTTCATC
AAAGTTCAATACACTTTAGTGACTGAAGAAGCAGAGAGGATAGGGGTAGA
CCACGTTGCTAGGGTTTCCACTGCCGCTCAATCAGAGATCTCTCAAGTGT
CGGAGTACATGCAGGTTCAACAAAGTGCGATCAAGATGTTGTCTTCAAGA
GTGGATATCATTCTCCAGTATGTCAGCGCTGTCAAAGATGGACATATTCC
GTTAGATCAGAGTATTATGCGTCAATGTCTGAGTCTTTGTCAACGCTTGC
CGGTGCTCAACACCAAAGAATTTCAAGGAGAATTTCACGAACAATGCAGT
GACATCACATTGATGTCCTACTTAGCAACCATCACTAAGGGATGCAGTAT
CACTAATGAGcTGATCAGCAAGTTCAATGTAATCTATGACAAACACGGAA
GCAGTCGGAGAATGCGTGGATTATTCTTCTAAATGTTTCAACAATCAAAA
CGGCTAAAAATGAATGACGAAAGCTCAACTGAGATGCCATCTTCATCATC
TGTCGCTGATGGGGTAGTCCCTGAGGCTGACAATGAAGAGTTCCTTGCTA
CTGGAGTTCCCGCAAGTGTTACTATTGCACTGCATCCACTTGTTATCATG
AATATATCTGATCATTATACCCGTATCAAGGCCCAAGAAGGAGTCGTGCC
TAAAGtttATGGAGCACTGTTGGGGAAACAGAATGGAAGAAATTTGGAGC
TTTACAATTCATTTGAATTACAACATTCGGAGAATGCTGAGGGATGTGTT
ATTGAAatggaatattttcaaaacaaagaggAACAGTTTCGTCAGGTGTT
CAGTGATTTGGATTTTCTTGGATGGTATACTGTTGGTTCATCCTCTGCTA
CTGAGCAAgacattaaaatacaaaaacagatGATTACTGTCAACGAAAGC
TCATTACTTCTAAAACTGGATCCTTTATCCAAATCATCAAATCTTCCGAT
TACGATTTACGAATCTATGATTGACATCATTGACCAACAGCCTAGAATGC
TCTTCATCAAAGTTCAATACACTTTAGTGACTGAAGAAGCAGAGAGGATA
GGGGTAGACCACGTTGCTAGGGTTTCCACTGCCGCTCAATCAGAGATCTC
TCAAGTGTCGGAGTACATGCAGGTTCAACAAAGTGCGATCAAGATGTTGT
CTTCAAGAGTGGATATCATTCTCCAGTATGTCAGCGCTGTCAAAGATGGA
CATATTCCGTTAGATCAGAGTATTATGCGTCAATGTCTGAGTCTTTGTCA
ACGCTTGCCGGTGCTCAACACCAAAGAATTTCAAGGAGAATTTCACGAAC
AATGCAGTGACATCACATTGATGTCCTACTTAGCAACCATCACTAAGGGA
TGCAGTATCACTAATGAGcTGATCAGCAAGTTCAATGTAATCTATGACAA
ACACGGAAGCAGTCGGAGAATGCGTGGATTATTCTTCTAAATGTTTCAAC
AATCAAAACGGCTAAAAATGAATGACGAAAGCTCAACTGAGATGCCATCT
TCATCATCTGTCGCTGATGGGGTAGTCCCTGAGGCTGACAATGAAGAGTT
CCTTGCTACTGGAGTTCCCGCAAGTGTTACTATTGCACTGCATCCACTTG
TTATCATGAATATATCTGATCATTATACCCGTATCAAGGCCCAAGAAGGA
GTCGTGCCTAAAGtttATGGAGCACTGTTGGGGAAACAGAATGGAAGAAA
TTTGGAGCTTTACAATTCATTTGAATTACAACATTCGGAGAATGCTGAGG
GATGTGTTATTGAAatggaatattttcaaaacaaagaggAACAGTTTCGT
CAGGTGTTCAGTGATTTGGATTTTCTTGGATGGTATACTGTTGGTTCATC
CTCTGCTACTGAGCAAgacattaaaatacaaaaacagatGATTACTGTCA
ACGAAAGCTCATTACTTCTAAAACTGGATCCTTTATCCAAATCATCAAAT
CTTCCGATTACGATTTACGAATCTATGATTGACATCATTGACCAACAGCC
TAGAATGCTCTTCATCAAAGTTCAATACACTTTAGTGACTGAAGAAGCAG
AGAGGATAGGGGTAGACCACGTTGCTAGGGTTTCCACTGCCGCTCAATCA
GAGATCTCTCAAGTGTCGGAGTACATGCAGGTTCAACAAAGTGCGATCAA
GATGTTGTCTTCAAGAGTGGATATCATTCTCCAGTATGTCAGCGCTGTCA
AAGATGGACATATTCCGTTAGATCAGAGTATTATGCGTCAATGTCTGAGT
CTTTGTCAACGCTTGCCGGTGCTCAACACCAAAGAATTTCAAGGAGAATT
TCACGAACAATGCAGTGACATCACATTGATGTCCTACTTAGCAACCATCA
CTAAGGGATGCAGTATCACTAATGAGcTGATCAGCAAGTTCAATGTAATC
TATGACAAACACGGAAGCAGTCGGAGAATGCGTGGATTATTCTTCTAAAT
GTTTCAACAATCAAAACGGCTAAAAATGAATGACGAAAGCTCAACTGAGA
TGCCATCTTCATCATCTGTCGCTGATGGGGTAGTCCCTGAGGCTGACAAT
GAAGAGTTCCTTGCTACTGGAGTTCCCGCAAGTGTTACTATTGCACTGCA
TCCACTTGTTATCATGAATATATCTGATCATTATACCCGTATCAAGGCCC
AAGAAGGAGTCGTGCCTAAAGtttATGGAGCACTGTTGGGGAAACAGAAT
GGAAGAAATTTGGAGCTTTACAATTCATTTGAATTACAACATTCGGAGAA
TGCTGAGGGATGTGTTATTGAAatggaatattttcaaaacaaagaggAAC
AGTTTCGTCAGGTGTTCAGTGATTTGGATTTTCTTGGATGGTATACTGTT
GGTTCATCCTCTGCTACTGAGCAAgacattaaaatacaaaaacagatGAT
TACTGTCAACGAAAGCTCATTACTTCTAAAACTGGATCCTTTATCCAAAT
CATCAAATCTTCCGATTACGATTTACGAATCTATGATTGACATCATTGAC
CAACAGCCTAGAATGCTCTTCATCAAAGTTCAATACACTTTAGTGACTGA
AGAAGCAGAGAGGATAGGGGTAGACCACGTTGCTAGGGTTTCCACTGCCG
CTCAATCAGAGATCTCTCAAGTGTCGGAGTACATGCAGGTTCAACAAAGT
GCGATCAAGATGTTGTCTTCAAGAGTGGATATCATTCTCCAGTATGTCAG
CGCTGTCAAAGATGGACATATTCCGTTAGATCAGAGTATTATGCGTCAAT
GTCTGAGTCTTTGTCAACGCTTGCCGGTGCTCAACACCAAAGAATTTCAA
GGAGAATTTCACGAACAATGCAGTGACATCACATTGATGTCCTACTTAGC
AACCATCACTAAGGGATGCAGTATCACTAATGAGcTGATCAGCAAGTTCA
ATGTAATCTATGACAAACACGGAAGCAGTCGGAGAATGCGTGGATTATTC
TTCTAAATGTTTCAACAATCAAAACGGCTAAAAATGAATGACGAAAGCTC
AACTGAGATGCCATCTTCATCATCTGTCGCTGATGGGGTAGTCCCTGAGG
CTGACAATGAAGAGTTCCTTGCTACTGGAGTTCCCGCAAGTGTTACTATT
GCACTGCATCCACTTGTTATCATGAATATATCTGATCATTATACCCGTAT
CAAGGCCCAAGAAGGAGTCGTGCCTAAAGtttATGGAGCACTGTTGGGGA
AACAGAATGGAAGAAATTTGGAGCTTTACAATTCATTTGAATTACAACAT
TCGGAGAATGCTGAGGGATGTGTTATTGAAatggaatattttcaaaacaa
agaggAACAGTTTCGTCAGGTGTTCAGTGATTTGGATTTTCTTGGATGGT
ATACTGTTGGTTCATCCTCTGCTACTGAGCAAgacattaaaatacaaaaa
cagatGATTACTGTCAACGAAAGCTCATTACTTCTAAAACTGGATCCTTT
ATCCAAATCATCAAATCTTCCGATTACGATTTACGAATCTATGATTGACA
TCATTGACCAACAGCCTAGAATGCTCTTCATCAAAGTTCAATACACTTTA
GTGACTGAAGAAGCAGAGAGGATAGGGGTAGACCACGTTGCTAGGGTTTC
CACTGCCGCTCAATCAGAGATCTCTCAAGTGTCGGAGTACATGCAGGTTC
AACAAAGTGCGATCAAGATGTTGTCTTCAAGAGTGGATATCATTCTCCAG
TATGTCAGCGCTGTCAAAGATGGACATATTCCGTTAGATCAGAGTATTAT
GCGTCAATGTCTGAGTCTTTGTCAACGCTTGCCGGTGCTCAACACCAAAG
AATTTCAAGGAGAATTTCACGAACAATGCAGTGACATCACATTGATGTCC
TACTTAGCAACCATCACTAAGGGATGCAGTATCACTAATGAGcTGATCAG
CAAGTTCAATGTAATCTATGACAAACACGGAAGCAGTCGGAGAATGCGTG
GATTATTCTTCTAAATGTTTCAACAATCAAAACGGCTAAAAATGAATGAC
GAAAGCTCAACTGAGATGCCATCTTCATCATCTGTCGCTGATGGGGTAGT
CCCTGAGGCTGACAATGAAGAGTTCCTTGCTACTGGAGTTCCCGCAAGTG
TTACTATTGCACTGCATCCACTTGTTATCATGAATATATCTGATCATTAT
ACCCGTATCAAGGCCCAAGAAGGAGTCGTGCCTAAAGtttATGGAGCACT
GTTGGGGAAACAGAATGGAAGAAATTTGGAGCTTTACAATTCATTTGAAT
TACAACATTCGGAGAATGCTGAGGGATGTGTTATTGAAatggaatatttt
caaaacaaagaggAACAGTTTCGTCAGGTGTTCAGTGATTTGGATTTTCT
TGGATGGTATACTGTTGGTTCATCCTCTGCTACTGAGCAAgacattaaaa
tacaaaaacagatGATTACTGTCAACGAAAGCTCATTACTTCTAAAACTG
GATCCTTTATCCAAATCATCAAATCTTCCGATTACGATTTACGAATCTAT
GATTGACATCATTGACCAACAGCCTAGAATGCTCTTCATCAAAGTTCAAT
ACACTTTAGTGACTGAAGAAGCAGAGAGGATAGGGGTAGACCACGTTGCT
AGGGTTTCCACTGCCGCTCAATCAGAGATCTCTCAAGTGTCGGAGTACAT
GCAGGTTCAACAAAGTGCGATCAAGATGTTGTCTTCAAGAGTGGATATCA
TTCTCCAGTATGTCAGCGCTGTCAAAGATGGACATATTCCGTTAGATCAG
AGTATTATGCGTCAATGTCTGAGTCTTTGTCAACGCTTGCCGGTGCTCAA
CACCAAAGAATTTCAAGGAGAATTTCACGAACAATGCAGTGACATCACAT
TGATGTCCTACTTAGCAACCATCACTAAGGGATGCAGTATCACTAATGAG
cTGATCAGCAAGTTCAATGTAATCTATGACAAACACGGAAGCAGTCGGAG
AATGCGTGGATTATTCTTCTAAATGTTTCAACAATCAAAACGGCTAAAAA
TGAATGACGAAAGCTCAACTGAGATGCCATCTTCATCATCTGTCGCTGAT
GGGGTAGTCCCTGAGGCTGACAATGAAGAGTTCCTTGCTACTGGAGTTCC
CGCAAGTGTTACTATTGCACTGCATCCACTTGTTATCATGAATATATCTG
ATCATTATACCCGTATCAAGGCCCAAGAAGGAGTCGTGCCTAAAGtttAT
GGAGCACTGTTGGGGAAACAGAATGGAAGAAATTTGGAGCTTTACAATTC
ATTTGAATTACAACATTCGGAGAATGCTGAGGGATGTGTTATTGAAatgg
aatattttcaaaacaaagaggAACAGTTTCGTCAGGTGTTCAGTGATTTG
GATTTTCTTGGATGGTATACTGTTGGTTCATCCTCTGCTACTGAGCAAga
cattaaaatacaaaaacagatGATTACTGTCAACGAAAGCTCATTACTTC
TAAAACTGGATCCTTTATCCAAATCATCAAATCTTCCGATTACGATTTAC
GAATCTATGATTGACATCATTGACCAACAGCCTAGAATGCTCTTCATCAA
AGTTCAATACACTTTAGTGACTGAAGAAGCAGAGAGGATAGGGGTAGACC
ACGTTGCTAGGGTTTCCACTGCCGCTCAATCAGAGATCTCTCAAGTGTCG
GAGTACATGCAGGTTCAACAAAGTGCGATCAAGATGTTGTCTTCAAGAGT
GGATATCATTCTCCAGTATGTCAGCGCTGTCAAAGATGGACATATTCCGT
TAGATCAGAGTATTATGCGTCAATGTCTGAGTCTTTGTCAACGCTTGCCG
GTGCTCAACACCAAAGAATTTCAAGGAGAATTTCACGAACAATGCAGTGA
CATCACATTGATGTCCTACTTAGCAACCATCACTAAGGGATGCAGTATCA
CTAATGAGcTGATCAGCAAGTTCAATGTAATCTATGACAAACACGGAAGC
AGTCGGAGAATGCGTGGATTATTCTTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029390XLOC_029390Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045981-proteinTCONS_00045981-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045981-exon-scaffold_105-1491911889:197192..198759TCONS_00045981-exon-scaffold_105-1491911889:197192..198759Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:197192..198759TCONS_00045981-exon-scaffold_105-1510915933:197192..198759Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:197192..198759TCONS_00045981-exon-scaffold_105-1575043694:197192..198759Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:200520..200651TCONS_00045981-exon-scaffold_105-1491911889:200520..200651Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:200520..200651TCONS_00045981-exon-scaffold_105-1510915933:200520..200651Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:200520..200651TCONS_00045981-exon-scaffold_105-1575043694:200520..200651Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:200887..200978TCONS_00045981-exon-scaffold_105-1491911889:200887..200978Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:200887..200978TCONS_00045981-exon-scaffold_105-1510915933:200887..200978Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:200887..200978TCONS_00045981-exon-scaffold_105-1575043694:200887..200978Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:201318..201380TCONS_00045981-exon-scaffold_105-1491911889:201318..201380Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:201318..201380TCONS_00045981-exon-scaffold_105-1510915933:201318..201380Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:201318..201380TCONS_00045981-exon-scaffold_105-1575043694:201318..201380Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:201620..201667TCONS_00045981-exon-scaffold_105-1491911889:201620..201667Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:201620..201667TCONS_00045981-exon-scaffold_105-1510915933:201620..201667Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:201620..201667TCONS_00045981-exon-scaffold_105-1575043694:201620..201667Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:202197..202311TCONS_00045981-exon-scaffold_105-1491911889:202197..202311Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:202197..202311TCONS_00045981-exon-scaffold_105-1510915933:202197..202311Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:202197..202311TCONS_00045981-exon-scaffold_105-1575043694:202197..202311Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:202648..202740TCONS_00045981-exon-scaffold_105-1491911889:202648..202740Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:202648..202740TCONS_00045981-exon-scaffold_105-1510915933:202648..202740Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:202648..202740TCONS_00045981-exon-scaffold_105-1575043694:202648..202740Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:203613..203713TCONS_00045981-exon-scaffold_105-1491911889:203613..203713Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:203613..203713TCONS_00045981-exon-scaffold_105-1510915933:203613..203713Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:203613..203713TCONS_00045981-exon-scaffold_105-1575043694:203613..203713Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:204724..204792TCONS_00045981-exon-scaffold_105-1491911889:204724..204792Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:204724..204792TCONS_00045981-exon-scaffold_105-1510915933:204724..204792Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:204724..204792TCONS_00045981-exon-scaffold_105-1575043694:204724..204792Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1491911889:205690..206145TCONS_00045981-exon-scaffold_105-1491911889:205690..206145Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1510915933:205690..206145TCONS_00045981-exon-scaffold_105-1510915933:205690..206145Clytia hemisphaericaexon
TCONS_00045981-exon-scaffold_105-1575043694:205690..206145TCONS_00045981-exon-scaffold_105-1575043694:205690..206145Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:197192..206145 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.1957	40.6632	45.9879	44.0036	32.393	24.4154	31.7138	33.9608	26.2048	25.9637	20.0562	20.1851	15.2597	15.1344	11.1136	11.3129	19.7677	21.5019	9.87138	8.07814	17.1866	17.9279	26.2657	24.9663	32.9208	34.1967	10.507	8.8179	14.9971	16.4858
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
IPR024969Rpn11/EIF3F_C
IPR033859MPN_CSN6
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000338 protein deneddylation
cellular_component GO:0008180 COP9 signalosome
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00045981 vs. Swiss-Prot (Human)
Match: CSN6 (COP9 signalosome complex subunit 6 OS=Homo sapiens GN=COPS6 PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 1.803e-98
Identity = 157/298 (52.68%), Postives = 220/298 (73.83%), Query Frame = 2 
Query: 1457 LATGVPASVTIALHPLVIMNISDHYTRIKAQEGVVPKVYGALLGKQNGRNLELYNSFELQHSENAEGCVIEMEYFQNKEEQFRQVFSDLDFLGWYTVGSSSATEQDIKIQKQMITVNEXXXXXXXXXXXXXXXXXITIYESMIDIIDQQPRMLFIKVQYTLVTEEAERIGVDHVARVSTAAQSEISQVSEYMQVQQSAIKMLSSRVDIILQYVSAVKDGHIPLDQSIMRQCLSLCQRLPVLNTKEFQGEFHEQCSDITLMSYLATITKGCSITNELISKFNVIYDKHGSSRRMRGLFF 2350
            +A GV  SV++ALHPLVI+NISDH+ R+++QEG   +V GAL+GKQ GRN+E+ NSFEL      E  +I+ EY+  KEEQF+QVF +L+FLGWYT G       DI + KQ+  + ES L LKL+P++K ++LP++++ES+IDII+ +  MLF ++ YTL TEEAERIGVDHVAR++     E S V+E++  Q SAIKML SRV +IL+YV A + G +P +  I+R+  +LC  LPVL+T +F+ +F++QC+D+ LM+YL TITK C+  N+ ++KFNV+YD+ G  RRMRGLFF
Sbjct:   31 MACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGP-PDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF 327
The following BLAST results are available for this feature:
BLAST of TCONS_00045981 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CSN61.803e-9852.68COP9 signalosome complex subunit 6 OS=Homo sapiens... [more]
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