TCONS_00045666 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045666
Unique NameTCONS_00045666
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1000

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045666 ID=TCONS_00045666|Name=TCONS_00045666|organism=Clytia hemisphaerica|type=transcript|length=1000bp
ATTGGATTTCCGTTTGAGTTTTTGGAAACGGCGGATTTCCAATGTATAAT
TTGCACCCATGTGATCAGAGGATTTACGGAGCTGCCATGTGGTCATGCTG
GGTGCAAATTATGTATTGAAGAGTGGGAAAAACGAAAAGTggctTGCTGC
GAATGTCAAACGGCATATGACAAGACAAAGAAACATGGAAGTCTGTACAA
TGACCGAAAAATCAAGCACGAAAAGCAAGCTCACTGCAAGCAACACGAGA
AAGGCTGCACTTGGCAAGGCTCCATTGATGATTACAAGCAGCAGCACCGC
AAAAAGTGTGCATTCAGAAACGTCAGATGTCGTCTATGTAATCAAAAAGT
CGCCCGTCATGAAAAGGAAGGACACAAGTTGACGTGTACACATCGTTTGG
TTAATTGCACAACATGTGGCGCCCAGTACAGGTTCATCAACAAAAAGAAA
CACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATTGGCAATATGGTTG
CCATGAAATGaTTCACAAACGGCACATGGAGCGTCACCTCGCCAATTCAG
CAAGACGTCATATCGAACTTGTTAAAGCTCATTATGACAGAATTGTTGCC
GAAAATAATTGGTCATTGGCAGAGAAGGACAAAGAGATTGGAGTACTGAA
AACGAGGGTTTTGTCACAAAGCGAACGCATTATGGAGCTTGAAGGGAAGG
AAATACCAATGGACATCCCCATGTGTTATAAagacGAATCTTTGGCCGGA
AAGGATTGGTTATTGGCAGAGAAGGACAAAGAGATTGGAATACTGAAAAC
GAGGGTTTTGTCACAAAGCGAACGCATTACGGAGCTTGAAGGGAAGGAAA
TACCAATGGACacacaatcagggacaaaatgcttggcaaaaaagggaaat
tcaccggggtgttttgaaaccacaatcgatttgtaagtgctctaaagtag
gttcgaagggtagagttttaactctgagttttaacgctagacttaagact
Run BLAST on NCBI

transcript from alignment at scaffold_100:280733..305516+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045666 ID=TCONS_00045666|Name=TCONS_00045666|organism=Clytia hemisphaerica|type=transcript|length=24784bp|location=Sequence derived from alignment at scaffold_100:280733..305516+ (Clytia hemisphaerica)
ATTGGATTTCCGTTTGAGTTTTTGGAAACGGCGGATTTCCAATGTATAAT
TTGCACCCATGTGATCAGAGGATTTACGGAGCTGCCATGTGGTCATGCTG
GGTGCAAATTATGTATTGAAGAGTGGGAAAAACGAAAAGTGTAAGTCTGT
TCTTTTCTACCTAAAGAGAAACTTTAGTATGCGATCGTATCGACAAAGGG
ATAGTttattacgatagccttccgtgtgtatgtatgtatgtatgtggcGA
GACATTTtatggggcgcaaattatggcgtgggcgtttggctgcgggcgta
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tttatcacaagttccttcaaagcacaaaatgagggttctggcatcaaaga
atgaaaagttcattttttcttcttcattttcaaaaacaattaaaattatt
tttctcaagtatataTTGCggttctctgaattattctgaaatgaaagatt
ttgtttacgctttatagaatggaattctttagtcacattttttaaggaat
cttttttttaatggattgagatttttcataaaaaacagggtatctatgac
ctatgtgtacaatacattctctatattttgttcaaaatgcataatgctgc
aggagtcacgtatcacgcgtcttcgtcgttgatgttcaagtattatgcga
aattttcgactttaagttgtcttgtttttttttgatatCTTATTTGATAG
TGAAAACATAaaggctttttttgtaaaaaagaaatgcttaataagaataa
attaagaacagcctcaaattttagaaataacaaccaagaaaatattgaat
ttatcCTTTTTGTAAGCCAATAGTAAATGAACAGAGTAAGCAacaaatta
ggaacattttaagaacattggagcaatgaaatcaacaaaataagaacagc
cgagctgATTTATTTATTGTCGTACCTCCGATACCCTCTAACGAAATATT
TAGTTGacatggagtttttataagaacaaataatccatccattttcaggg
ctTGCTGCGAATGTCAAACGGCATATGACAAGACAAAGGTAGATAATAAA
TTCTTATCTTTTTCAAGTTCTATAATAAATCAATTCAGggaaatttcatc
actttttaaaCTGGGTTTTAAAGACCCTTTGCAAGAAAGTTTGCGAGCAA
GCGAATGATTTTCAAAACCAACCCTTTTCACAATGTTCTCGTCAAGAAGG
TTTGTGAACAAGTGAATACCTAAAAGTGATTTTCAAAACCAACACAACAA
TAGTTTGCAGAGAGGTATGAACCCACTAGGTTTATTTcactaaccccccc
cccccccctttcacctttcttttataaaaaaaaaaaaattttcaaaaaag
tatgaACCCCCAAGTTTTTTTtccctacccccccccccccgcctaTGTAC
GTCTTTAAATAACATAATACACTTTTGTGTTATGATGATacatattttta
ctttaaaacagACAGACTGTGACCATTTGTAAATGATTAAGTTgatcaaa
attttcaacttcccTTTCTTATTTGAACCCCTTAGCCTAATCTTGGAACA
TCCTACTAAAGTCCCCATAAAAGTTGCTGTTCCTCCCTATTAAAAAGAGG
GGTGCAATCTATGCAACGATTGAAGTGATGTTAAGAATGGTCAATTAATT
TTCAGAAACATGGAAGTCTGTACAATGACCGAAAAATCAAGCACGAAAAG
CAAGCTCACTGCAAGCAACACGAGAAAGGCTGCACTTGGCAAGGCTCCAT
TGATGATTACAAGCAGCAGGTTAGTTCATGTTTTTCGAGAACACTTTAAC
TTAAATATAGACTTTACAGAGTTTTCGTCGTTAATCGCAAAGTCTTGTAT
GTTTCTGTGACTCTTTTAATTTACAAATGTAACTCTATTGGCAGGTAATG
ATCATATAAGATAATTCGAAGTATGATTCTTAATTCATGatcatagtttg
cagaggggtatgaacccccctaggtttatttcatccccccctatataccN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccctt
ttttatttgatccccccctacattcccatcccccctagttttttcggcag
atctcggtaccccccctacaaaggccctccaaaaagttggcatccccccc
tattaaaaagggggggtgcaaactatgatgATATTCGGgacgtaatcttt
tctacgAAAACACCCCGGTCTTTGctagtagtggcaaattttgaagaatt
tttctctatttttaatTTGCCACTACCTGCAAAAACCGGGGTGTTTccgt
aaaaaaaattacatcatgaatatcatgaatacgaCCTAAAACATTAAATT
GGAGTAATTCGGATAcgattttcttttaaacaaactAGCACCGCAAAAAG
TGTGCATTCAGAAACGTCAGATGTCGTCTATGTAATCAAAAAGTCGCTCG
TCAGGAAAAGGATGGACACAAGTTAACGTGCACACATCGTTTGGTTAATT
GCATAACATGCGGTGCCCAGTACAGCTTCATCAACAAAAAGGTATAACAA
GTGCATTTTTGATAAGATCTCCAAAAACCCGAAAAAGGGACGGTTGAAGA
TGGTCCCGAAGTAAGGGATTTGCAATAAGCAAGAAGATGTTTAGAAAGAG
GGTTTGATTTTACTACTCAGCATTCGTAATTCCAAAAGAGAGAAATTAGT
CAATTTGAATATAGTATCTGAGCTGAGGGCGGTCAAAAagctatttaaaa
attttgaaaacgagaaacTTTAGGAGAAAGAAACGAAATTTAGCATTTAG
CATCTGACATGAGAGTTTCAATCGAAATAAGAACCCTGTTATACATAGAT
GAAGACTATATTTTAtatggatagcccagtaatctagccTAGGAATTTAA
GACAGAATTTCGCTTGTTTTACGGGGTTCACAGCTAGCCGgttcggctat
ctatgaacggAACCGAACATTGGAAGAATTCGAGCCGCGGATATCTGGTT
TTTGtgacgctgacgcctttgaccattTGGCTATCGCTCCTATACTAAGT
ACAAGATAACCTATGGGTGATAGACTATCAGAGGtattgaaatgatttta
tttagggtatttttcactCCAGAGATATGacaatggaaaatattttcttt
ttcaccttAGAAACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATT
GGCAATATGGTTGCCATGAAATGGTATACGACCTAGTGTCTGTATTGTCT
AGCTAAATCAGCTTtaaaaagaaactgaaaaaatgaAGCACTAGTGATGG
AGCATAGTGAAAACCAAATTATTTCCAGGACGGGACCCTACCTTTTTAAG
GATAATTTCAAAATCAGTAAGGGACAAATTCTTTAGAATTTCAGAGAGAA
TTTCACAtggtttcgttttttttctagaTTCACAAACGGCACATGGAGCG
TCACCTTGCCAATTCAGCAAGACGACATATCGAACTTGTTAAAGCTTATT
ATGACAGAATTGTTGCCGAAAAAGAAAAACGACTGGTCATGAAGAATAAG
GCAATTGCCGAAAAAGACAAATTACTCGGCGAAAAAAATAGCTCATTGGT
CGAAAAAGACAAATCATTGGCCGAAAAAGATAAGTTATTGGTCGGAAAAG
ACGAATCTTTGACCGAAAAAAATCGATTATTGGCGGAGAAGGACAAATCA
TTGGCCGAAAAAGATAAGTTATTGGTCGAAAAAGACGAATCTTTGACCGA
AAAAAATAGATCATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATA
GATCATTGGCGGAGAAGGAAAAATCATTGGCCGAAAAAAATCGATCGATT
ATTGGCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTG
GCGGAGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGG
AGAAGGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAA
GGACAAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGAC
AAATCATTGGCCGAAAAAAATCGATCGATTATTGGCGGAGAAGGACAAAG
AGATTGGATTGAACACGACGATTGTTTTACAAAGCGAACGCATTACGGAG
CTTGAAGGGAATAAAATACCAATAGCCACAGGAGGATCTAAGTATATTTA
CTTCTTATAGCTGCATACTAAAAATGCAGGGTTGTATCATTTCGTCTCTT
TAATTAACAGACTACATTTTAAAGATCGGAAACTTTTCCCACTTATTCTG
GCTTTGGGATAGacttacaaattttgaaaaaccatGAAAAACCTATAACA
AAATCTATcgagaaataaagaactaactCACAAGGCGTTTCATGCTGGCG
CAATCTTTAGGCAGTGCAAAGTATCGTAAATTTTAATTCAACCTGACAGT
CTAGTTAGACTGGAATCATTGAAATACGTAATACTGGTGTCATATCTTTT
AAAGTATAATGGTAATTTGCAGCCTTTGCATAACTTTCTCTATTTAACTT
Agattaggctacgtcatatctgccttcgtttcgagcgtaaaactcctact
cttcgtaagagtaaggcctaaaagcctagatctgtctattgtgtagNtag
gctacgtcatatcttccttcgtttcgagcgtaaaactcctactcttcgta
agagtaaggcctaaaagcctagatctgtctattgtgtagactaatttaaa
tttaatcaaCTATTGGTTTGACTTATAATCCCGCTTCCCTTACTAACAAT
TTCATGTACCAAACCTTTAAAATGAAGAGGAACAGATTTGAATTGAGTTA
AATTGTAATGCATTGTATTATATCTTTTTCATTGAACAGACCCACCGAGA
AACAACAGGTAACAAAACCAAAACCACTTCCAAGAACGGGAATTCAACTT
TATGACAGTCAAGAACAAGTCACACCAAAGCCTGCCCAACCAACAACGTG
AGTAGTGATTTTTATTAGAACCAACTTTACAAGAAAATTCAGAATGAAAT
TCATAAAACAGTAGAGATATTCCTAGacctgaaataaaaaacaaatcacT
TTGGTATGACTCGgccggggattgaacccacgactttgcgcaccgtagcc
gggtGCTCTTCCACTGTCCTATTGTCGTTTTGTAAGAGCATCCAGGCTGA
AATTCATaagataacaagtgatacttttatggacctacctaaagtctgtc
cagatataattggcccgtttttagtaattaagttggagatttgatatttc
acagaaaagtgctaccaaggggtattccgggtcccatatcttccgaagga
cttttctgtttgccttgaaatttatcaaacttcttaacctaaggttgaac
taccactggtgtaaaaatgaacgttgtagcttaagtagaaaaaaagctca
atttttacaatcgcaaattaaaacgctaaaaatcgcgaatttttcaactc
aaaatacattcaaatatagcgcttttgattctctaaaacaagcaaaaaaa
atttccataatcatatttgactatcaaaagttaccggcattcttgtttcc
actgccaattatatctggacagactttagttatgcatttaacacatatat
aattaatatctacgtgagcgtgaccattaaacaatcattcagaacacaaa
tagtgacgatctattaaaattagtcgtttgtttcttataaaaaaaaagtt
taaaaaccaaaagtttcatgctcttgaaatattcttcataTTCAAGGCtt
tatgagcaaaaaaacatccatctcatcaaaaaattgagtaatttggctaa
gaacattgatgtatgcttatcaatagtgattcttatagataaacatgcgt
tttttgagccaaaaaaatatttttgaaaaaatctgcttcagccatctttt
acctatgatggtaacAAAGTTCaactcgaaaatcgggctccgtcacattc
gagggtttatagttacacatctttgtgcaaaatcagaaaaaactaatgag
ccaatcacgaggaaagctaataacgaacgaacgaacggacaaaggttaat
ttataggacctccaccccaccggtgtaggtccaaaaattcagAACATCAT
AACATAAGCCTAATCTTATAATCCTAAGCCTGGTCAGTATTTCCAAGACT
GACACTATTTTACGCCACCAGCTTAAAATCTTATAAAATAGGTTGTAAAG
TATACGCTCTTTATTATGAggttttttaccctttttcaggTTCAGCATTG
CTCTTTTTTATNCCACCAGCTTAAAATCTTATAAAATAGGTTGTAAAGTA
TACGCTCTTTATTATGAggttttttaccctttttcaggTTCAGCATTgct
ctttctttttttgcgattttgggtctccttgtttttataaaattgttcta
taaaAAAAGAGTCCTAAAGGGTCGAtgatacttttttttcgaatcAATTC
TCCTTTTGCATCCCGATTCTTTGAGGTTTGTATAATGTTCAAGAGAAATA
AGTTGCCAAATTCAATGATGGGGGTATTCcccgggggtgggggggggtac
taggtttgcgaggtgacgggtatgtccgagccgaaaatcgaaaatcgacc
ctttgagagacaaaattttggtgattttgggaccctttgagggatttttt
cctaaattttggtccattttttccaaattttggtttgattttcaccaaat
tttggtcaaaaTTTTTGAAATCGTGACCCTTTGAGAGAGAaatttttgat
tttcgtgattttgggaccctttcagagactaacttttgaatttgtacccc
tttgagagacttttgaggaatgagaaaaggtacccttatggctcgcacat
acccggcacccattttgcctaagtacccccccccggggggtaTTCTTAGC
ACAATGTATTCTTAATTTTGCagtcaatttcatcatgaatgtTCAGATAg
aatatattcttataaaaaagcgtgtccGTCGTGAAAGAGCTTTTCGGCTA
TGGTATTCTACTTATCAAGCTGATTTTTTCTCCTAATGCGagcatagtcc
gtataaaaaccccggtctggaagccttttgttttttcgcattgtttctta
cttgaacttgcgttgagtaattagtttgttttgctcactttttgatcgtG
TGATTGAATATTacaaccaatcccaagaggagtaattggtaacgtgatca
aaaactgagctgacaaaaagctaaaacaataagTTTCCAGACCAAGGTCT
GACGATGCGATATACTACTTGTTTTATCAAATTATTCCATGGTATTTTTA
GAACCAAATGGGACGGAAAGAAAATTCATGAGATAGTGTTCCAGGGTAAA
AGGCTGTCGTTTGATGGTAAGTTGaatttgtatatgtaatcacatgataa
cgagtacaattcgagaataattacacgagtgcaattttcgaattgtacga
gttattatgtgaatACGAGCTAATCGTACAATgggtttcactactttttc
cccgttaggaaagtaaattacactgaaagttttaaattttctcttctctc
tatgtttttcttttattgttattcatggattttctttctcacaaaataaa
tttcgagttcaattaaaacgttcgatgaaaaaaaattgtaagagAAAACA
TTAAAATCGATTTAGTAAATATTGGCGCGGCATCGatgagtgtgattaac
gattaattgctctctacagaatgcaattaacgattaattgctctctttga
aggggtgccaaatgggaaaaaataactcatcgtgcgattatacTATTAAT
TTTTCACATCTCTCAATAAAAAAAAAGGAGGTCTCAAAATCTTTTTGGTT
GATTACGATTCTATTCATTtaaaccttttttataagaacagaatattaag
aacaaaagGATTCGATGGTCAAAATTGTTAAGAACAAAACAAGTAAAAGA
CTTTTAGGCTTTGCGGGCTCTAAACATACCCGGCTTCTTTGAACATTGCA
AAAtaacactcacaaaatggtgaaattaagaaagTTTTGAGATCATATTT
AGGCTTAAAAAAGTTGAGAAcctccgaaggcttcaaaaacgtttgatgtt
cttataaaaaacatgtatatacACAAGGGAGTCGTCAATTAACCAAATTC
ATTCATTATGtcgatttcatttttaatttcgcatagcgaaagtattacga
tagtctttttgtgtgtgtgtgtggcgagaaaaatttttgggcgcaaatta
tggcgtgggcgtttggctgcgggcgtactacggccaatattttAAAgttg
gactcactcacaaagataaaaaacagcgcttttcttgANNNNNNNNNNNN
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NNNNNNNNNNNAAAaattttggcgggtatttaatttggcggatttcgcct
aaaaccgccaaatccgccaaatttaatccccgccaaaattaatacactta
agGTATTGCGTTGAGATTTTGGAAAATCTCAAAGAGTATTATNatatttt
gtgtaacgcttcattcaaaatccataatgctgccggagtcacgtttcacg
ttttcgtcgttgatgttctaatattatgcgaaattttcgactttaagtcg
tcttgtttttcttcttctcgGCTCGtataaaagtagaaaattttagcGCT
CAAAGAATGAGTTAGTTTTTTATGAGGATGGAGGAGAGGGTTGTTTTATG
GGTTTGGATGATTGATGTTTTTATATCGAGATCACACAGTTCAATTAGAT
GTTACgttaaagggataaccagatggtttgagatatttagattaCAGAAA
CCTTCTGTGGTATTTATTAAACCCCCgtaaaacctcaaagtatttttttg
taacaattttccaaaatcgagatatcaaaatttgaaattttagaaaatgg
gttcttacacgattcttacgttgaaattctattgttttcatcctaAAAGC
CAAAACTTGTATCTTTaaaatatctcgactttggttttgctcaggacaat
agaaggatcccacatgccaaatattacaaaccatctgattatccctttaa
taaTGGAAAAAGCTCGTTGCAATAAAAGGTTTAAATCATGAAActtgtca
ttttatcatttaCTCAGATTAAACTGAAATTTAAGAAAGAAACAATTGGT
AAAATTATtgcaaataatgtttttaaatttgaagaGACAAAACGTGAAAT
TTCTAAAATCATTTGACAATCATTGACATTCTTTACTTTGATCCTTAAAC
AAACTTTGCCCNGTGAAGAGACAAAACGTGAAATTTCTAAAATCATTTGA
CAATCATTGACATTCTTTACATTTATTTGCCTTTGTTGAATTCGTCAACT
TCTCAATTTATGGAATTCCATTCTGACAAAAGACATTTTTTCTCGAATGA
TTAGCAGTTGCTAATACAGAAATGGTTTTTTCAATTCAGTTTTcattcaa
atcaaaagaaaattcgcCATAATTTAAACATCtctttttcctttctttat
gaaaaaaattattttcaaaatatttttagttcCCTGNTAATTTAAACATC
tctttttcctttctttatgaaaatatttttagttcCCCAGATGTCGAGgt
tcgattttttaaagtagaaatttcGTATCTTTATGATTAAAAATGATTTC
GCACTGAGAAAAAAGTACtcatctaaaattcaaaatttttttgccatcaa
ttcagaaatatttttcttgttcagATTGGAAAATTTCAGCTCATAATTAT
TCTTAGTTTCTGAGATCTCGAGGTTCGATTTTTTAAagtggaaaaatttt
cttctgtcacggataaaaatgatttcttgctgagcaaaaagttttcatct
aaaattcaaaattttttcgccATCAATTCGGAAAGGTTTTCCTCGTTCtg
tttacaaaatttcagcttcaaagtatttttagttCCTGAGATATTGagat
tcgttttttttttgaaagttttttttaccgcgtgaaaagtttgaatttct
tcactttctcttcagatgtttggaaaattttgagcgaaaagaatttcacg
aaattcgaagaaattttCCAACAAAATCCGAACATCGTCAACTCGTTGCG
TGATAGTTTTGATCAGACACTTCTCATGAAGGCTGTTTATGAAGATCGTT
TCGACGTTTTCGTTCACTTGATGGATTATCCTCATGATTTTTCACTCGTG
GACAATGATGGTGAGAACGTTCTTCATTTTGTTGGTTCGCATGGAACAGT
TCGTTATTTGGAAAAGTTTGATCAACAAACCATCAAAATGTTGATCAATG
GAAGAGACAAATCGAACAACGACACACCATTGCATTATGCAGCAAGTTGG
AACaaacatgacgtcatcagatggtTGTTGGCCAAAGGAGCGAATCCAGA
ATTGAAAAACAATCGTGGTCAACGCCCTGATGAACGTGGATGTTGTGATG
GTGTTACCAAAGAAATCTTTCGATCGTTTCGTTCGTCTTGGTAAGAAAAA
TATCCACTTTTTCATGTTTATTTAGGATAGGATCGTtgaaatgttcattc
ttttgaACCGAAAAAAAAATCGTTCACATAATGGATGGTGATAAAAGGTA
GTTTTTAATTCTTTGATGCTTCGGTAGTTTTTTTGACTACTTTCCGATAC
GTTTCAAATTAATTATATTGAACCGAAAAATCGTTCACATGATGGGTAAA
ACGTAGTCTTTGGTGTTTCGGAAGTTTTTTTTGGCTACTTTCCGATACGT
TTCAAACACACGAAATGGAAAATCATATTAAACTCTTGAACAGTTTTTCA
AGCCTATATACCTCTCAACAGGGTTTTACGAAACAAACAATTATTCaatt
attctttttttcttctttatcttgtagatttgattgattgattgattgat
tgattgattgattgattgatggtTGTTGATTTCATCAAACTTTTCCACTG
AACTCAGACATTCCATTACTACAGGAGGtattgaaatttcatttttaatc
cAAAATGCGTTTTCATATTATTTTCGCAGAAGTCATAATTTTCGTATTTT
CGTaatatttattgaaatttgattcttttcttTGAATGATAGTGTACAGA
CTATTTGAGTAAAGGCTATAACGTActtttcattattattttcCCAATTT
ACAGCCCCTTTAgaaaatacaatatttttttcataagaacattcaaaatt
actttaatttaaatttttcattttctccatATTCTGTAAATTCTTGTcta
tttttcttaagaaatcgggtgtttaatttccgcaaagctttaaaatgttc
ttaacttgttcttaatattttagcattCGAAaccattgttcttatatagt
ttacaTTTATATAATATGTGTACTTTTTGTTGACCTTTACATTTCTTATT
GGGACCTTTTCGTTGAATATTTTTCAGGCTTTTGATTGGTTCAAGCTCTT
GGTTAAACTTCACTTTGGCAAATGAGCGGAACTTGACGCAAAATGTGGCC
ATTCATCCGTCCATCCGCCCTCACGGCCGTCCGTCCGCCCGTCAATCCAC
CCGCCACAGGATTCGTTATTCATGAAAGTTGATCACAAGATGTTCAAGCC
ATGGATTACGAATTGAAACTCCTCGTCCGTCCGAAAAAAACATAACACGT
TTGTTTATCATCAagttcttaaattttcattttaactaAACTTTTTTGGT
AATATTTATGCTAAGTAGATTTATAttcgattttattttattgtacataa
tgacatttttttatccaaaataGNACCTCGTAcgtccgaaaaaaaaacat
atacacGTTTGTTTATCATCAagttcttaaattttcattttaactttttt
ggtaATATTTATGCTAAGTAGATTTATAttcgattttattttattgtaca
TAACCCATTTGTTTATCCAATATATTGCTATTTGAAAGAAATCACTCAAA
ATTGAACTCTCAGCTTCGAGTTCCACAAGCAAATTAATTTCTGTGTATAA
TTCGTGAAAAGGGAAGGGGTGAAAAATAATTACATTTTTATCCCACTCCT
CACCGCAACTTTTCATTGGCTCAAACACGTGATCACTCCCTAGCTAGAAG
AGCTTAGAAATTAAAAACCCGTGTTTTTACCGATTCTCCctgtttaaatt
tcaaattcgtttactttatcggccctttttacgccggccctaatttaacg
ccggccccttttacaCCGACCATTATTACGCCACAGTctgattttgggct
tacgccaattagggccgataataacgccaaaatttgtaaaaatggctact
tctgcttcaaattagtaaataatgactaaaatttacattaaaatgtcatt
tgtCAGTAGTGAacctgttgaaaattccatcgaaaatcactgatttttaa
atatattaggtatttcactgaagttttaaatatggagGAAAACAAAggat
aattttcgtcttcgaatcatacctaaaatcttttaaattgagaaatggTG
ATAAAAATTAACGCCGTTTTTAGGTTAGAATTGCAAAATCTTTGCCCTta
tacgccacgagcccaaaaataacgccaaggTATCTGTAAAGAGGGGAAGT
AGAGCGGAGtgagacatttttcaaataagtTTGCCGTTGCCATAATCAGT
TTTCGGGAAAATTTAACCTGATAAAGTACAGTGAAACCTCTAATTAACAG
ACACTCCAAAAAGCGGACACTGTCTAAATAGCAGACAAAACCTATTCCCC
CTTTATTAACAAACGCCACTAAAACAGTCTACAAAAAGCGGACACCAGTA
GTAGTAGAAGTTTCAATTTTTGGATGCATTTACACAATTATGTCAGACGC
TAGAAATGTTTGACCTTTTCAATGtaacttttcaatttctttttcaacat
TCCGTTTTCTTATGAGGAAATCCTATTAGAATACTCTCGAAGCAATCCCA
CAATGCaacgcttttttagaaaataaaaaacaccGATAAGATAATTGCTT
ACGTCCGACAAATTGCTTGAATGTAAACTCTTGTGAGCGTTTATAAGAAT
TATATGATGACacgcttttctttttaaaagaacaaataaatTTGGGCTGG
GGCTCCGCTGTTCTTATTCTTGAATATATGACTCAAAAGGCTTAAAAACA
GCATTTCCTGAACCATTTCCGAAACCCAAAGCTTGAATTGTTGTTAATGT
TCTTAATCATTTGCTCAAATTGAGCCTCGTCCCttatataaaattgttct
tataaaaagaaataaaatgcTTGTATATAAATTATGACTTTTTCTTTACA
GATAatccattatgactttctttcGATAATGTATATAGAGAGTTTTGTGA
TGCTTCGGCTTAAAAAATAAAGTGATTTGATTTAATACTTTCCTATTGCT
TAAAAAACAGATATAAAGCAGTTTTAAAACTACCCATAATGCCATCCGAC
AAGAAAAACATTTATAATACAAACCTCACCTTTACTGACAATTAGTTCAT
AACAGAAAGTTGATGCATGTAAAGTTGACTTTTCTTATGCGAAAGTTATA
CACTCGTTTTATAATACGAACCAGTGAAATTTGATTTGACTTTTgaatac
agtggaacctctaattagcggccaccatcggggaaaggggtcagtgtccg
ctaattagaagtgtccgcctattagaaacttttgatctcggagctccaat
ttgaaattaggccatcccagggtgtcgaaaatacaaaattggggtctaaa
gtacttatctgcagacactagaCCATAGAAGAACAAGAAAAAGGTTATTA
AAACGCAACAAATTAGTTTTTAGCAAATAAAAGGAAATCTAGAATTATaa
caccaaaattgaaaatacaattcgttgaatgggtcaagggaaaactggaa
atttgtagaaataatttgaataataagactaataagtgcttgaaataaaa
atatctaaaaaattttttttcgattttggacgtctgcgacccgtttgata
ttcaatgtccgctaattggagagctaaaataggggttttggccatttcgt
gcgaaaaaaaTTGTctgctaatcagagggtccgctaatcagagggtccgc
taattgagtgtccgccttttagaaacttttttatgaggatttgactaggg
aacggccggggaaaatgaaattgtccgctaatcagaggtgtccgcctttt
agagtgtccgttaattagaggttttactgtactTGAATTTAAgactcagc
attgttcttaaattgttcttacttTTTGATGTCTTGATTTCCTGATATTT
GAGAGAAGATACTGTAACGAGACAAATCCAATTCATTTCGAGTCAACCga
gtttttggaaagttttcggGGAATAAAAGAGGTAAGTAATCTCCACAATT
GGATATTTTTATACAAGAATTGAGTGTATGAGAATTAAgtataagaacat
aaatttAAGgatattttaaggttttgcggattaagaatattcattatgaa
atggatttacacaattcttataaaaaaaagcgtgtatttaaaaCAACAAG
TTTTTGGAGTTTTAGTCCCGTACAGGGTGACTTATGTGGCAAATTTAGGG
TACACTTTTTTGGCTCTCTTGGTTTGTATCTGACCCAAGTTAAAAGTGCT
GTAATTTTATTGGGTAGAAAATTTAGAGTCATTTACTAAATGTTTAAATA
GAAATATTTCAGGCATTACTGGACATTTATGAAAGAACGAATCCGTGTTT
GAAATGAACTAATTGATCATATAAAACTGCTTAAAATTCACAAAGATTAT
GAAGATGTTCTAATCAAAAACAATATTGCATAAGTACGGCAATTTTGGTA
CGCTTCATAAATTCCGACTTCAGCATGGGATCTGCTGCTTAAAATTCACA
AAGAGTATGAAAAAGGCTacgctacgtcatatcttctttCATTTCGAACT
CCTACTCAAGATTACGGCCtcaaagcctggagctgtctattgtgaaGACT
ACAAAAAGGCCGGTAGTCATTTGTTCTCATTAAAAATATTGTACAATACA
ATATTGCTAAGTAAGGCAATTTTTTGCACTTCCTAAATTCTGACTTTAGC
ATGGGGTCTTTAAGAGTAATCctctaaaaaaaaaaagctaatcgaTGCTC
TATGCTAAGTTCAACCATGAACATTCAAAGTAGGTTCAGTTTAGAACGAA
ATTAAGACTAATCGAAATACATAGACAAGACATTCCATTTTGTGAATGTG
TTTCATTTAGTGTATCTGCACACAAAAGGTACGGCAATTTTTTTAGGCTT
CCTAAATTCCAACTTCAGCATGAAGTCTTTAAGAGTAATCctcttaaaaa
ataaaagctgATCGATGCTCTATGCCAAGTTCAACCTTAATTGTCAGCAT
TCAAATTAGGTTCAGTTTAGGATGGCAGTCATTTGttctcatttaaaaac
aatattGCATAAGTACGGTCATTCTTTTCACTTCCTAAATTCCGACTTCA
GCATGGAGTCTTTAAGAGTAATCctcttaaaaataataaaagctGATTGA
TGCTCTATGCTAAGTTCAACCTTAATTGTCAACATTCAAATTAGGTTCAG
TTTAGAACGAAATTAAGACTAATCATTTCATTATGTGAAGGCATTTAATG
AACTGCAAACAAAATGCATTTTATTGAATCATTTAAATCGACTCTATCAA
gggaatattttttcaaagcaattttGAAGTCAACACCATAAAAAGATTTG
GATCTATTTTAAAAAAACCAttgttgtaaattttttttcttaactttttc
gtACAATTTACTCCATTGAGTTTACTGGCACTCCCTCTATCTTGTCATGA
ACTCAAAGGCGGAACTCAAGTCTCCTTGGGAAGGCGTAGATAGAAGTATC
GTTGTCAAAGATGACATCAACGAGAGGAGTACAAAAATTTACATTGACAG
TAAAttccttcaatttttatttttccaggtAAACTAATTCATTTGTCCGT
TTGACAATTTGACAAACTATAATCTTCAAAGATAAAAAATCACACAAAGC
ACTCTGTCCTCGACAAAAATAATGGCAGCTTCTCGTGATCATGACAACAA
CAACATGAACGGTTACTCCTCATCATCTAGCGAAGAAGACGAAAACattg
gatttcattttgaacTTGTTGAAAATGATTTGCAATGTATCATTTGCCAC
TATGTGATCAGAGGACTTACGGAGCTGCCATGTGGTCATGCAGGGTGCAA
ATTCTGCATTGAAGAGTGGGAAAAACGAAAAGTGTAAGTATGTTTTTTTC
TACCTAAAGAAGAATAGTATCGACAAAGgggtagttttttttttgatatc
tTATTTGATAGTGAAAACATGaaggctttttttgtaaaaatgaaagaaca
TTGAAACCAggaaatcaacaaaataaataagaacagccgagcctgaTTTA
TTTATTGTCGTACCTCCGACACCCTCTAACGAAATATTTAGTTGACTTgg
agttttataagaacaaataatCCATCCGTTTTCAGGGCTTGCTGCGAATG
TCAAACGGCATATGACAAGACAAAGGTAGATAATGAATTCTTATCTTTTT
CAAGTTCTATAATAAACCAATTCAAggaaatttcatcactttttaaaCTG
GGTTTTAAAGACCCTTTTCAAGAAAGTTTGCGAACAAGTGAATGATTTTC
AAAACCAACCCACTACAAAAGTCCCCATAAAATTTGCTGTTCTTCCCTAT
TAAAAAGAGGGGTGCAATCTATGCAACGATTGAAGTAATGTTAAGAATGG
TCAATCAATTAATTTTCAGAAACATGAAAGTCCGTACATTGACCGAAAAA
TCAAGCACGAAAGACTAGCTCACTGCAAGCAACACGAGAAAGGCTGCACC
TGGCAAGGCTCCATTGATGATTACAAGCAGCAGGTCAGTTCATGTTTTTC
GAGAACGCTTTAACTTAAATGATTTTGGTGTTtgagcataaaagttatgt
ttcaggttcctttacacttttaacaaagaacgAGAACGCTTTAACTTAAA
TATAAACTTTACAGAGTTTTCTTTACAGAGTTTTCGTCGTTACTCGTGAC
TCTTTTAATTTACAAATGTAACTCTATTGGTAGGTAATTAATATACAAAT
GTAACTCTATTGGCAGGTAATGATCATATAAGATAATTCGAAGTACGATt
cttaattcatgatattcgtgacgtaatcttttccaCGAAAACACCCCGGT
CTTTGCAAGTAGTGGTAAATTTTGGAGAATTTTTCTCTAGTTTAAAGTTG
CCACTACCTGCAAAACTTGGGTGTTTCCGtaaaaaaattacgtcatgaat
atcatgaatacgaCCTAAAACATTAAATTGGAGTAATTCATATAcgattt
tcttttaaacaaactAGCACCGCAAAAAGTGTGCATTCAGAAACGTCAGA
TGTCGTCTATGTAATCAAAAAGTCGCCCGTCATGAAAAGGAAGGACACAA
GTTGACGTGTACACATCGTTTGGTTAATTGCACAACATGTGGCGCCCAGT
ACAGGTTCATCAACAAAAAGGTATAACAAGTGCATTTTTGATAAGATCTC
CAAAAACCCGAAAAAGGGACGGTTGAAGATGGTCCCGAGGTAAGGGGTTT
GcagaaaacaagaaaatgttTAGAAAGAGGGGTTGCTTTTACTACTCAGG
ATTCGTAATTCCATAAGAGGGAAATTAGTCAATTTGAATTTAGTATCTGA
GTTGAGGGCGGTCAAAAAgctatttacaaattttaaaaacGAGAAACTTT
AGGAGAAAGCATGAAACGAAATTTAGCATTTAGCATCTGAAATGAGAGTT
TCAATCGAAATAAGAACCCTGTTATACATAGGTAGATACTAACTATATTT
TATATGGATAGTCCAGTAATCTAGGAATTTAAGACAGAATTTCGCTTGTT
TTTACGGGGCTCACGGCTAGCCGGTTCGGCTATCTATGAAAGGAACCGAA
CATTGGAAGAAACATGGGTTCGAGCCGCTGATCTTTGCTTTTTGTAACGC
TGAAGCCAACCATTTGGATATCGCTCCTATACTAAGTACAAGATAACCTA
TGGGCGATAGACTATCAGAGGaattgaaatgattttatttaGGGTATTTT
TTACTACAGAGATATgacaatgtaaaatattttcttttttcaccttAGAA
ACACGAAGATGAAGAGTGCAAGGTGCCATGCGATTATTGGCAATATGGTT
GCCATGAAATGGTATACGACCTAGTGTCTGTATTGTCTAGCTAAATCAGC
TTaaaaaagaaactgaaaaaatgaAGCACTAGTGATGGAGCATAGTGAAA
ACCAAATTATTTCCAGGACGGGACCCTACCTTTTTAAggataatttcaaa
atcactAAGGGACAAATTCTTTAGAATTTCAGAGAGAATTTCACAtggtt
tcgttttttttctagaTTCACAAACGGCACATGGAGCGTCACCTCGCCAA
TTCAGCAAGACGTCATATCGAACTTGTTAAAGCTCATTATGACAGAATTG
TTGCCGAAAATAATTGGTCATTGGCAGAGAAGGACAAAGAGATTGGAGTA
CTGAAAACGAGGGTTTTGTCACAAAGCGAACGCATTATGGAGCTTGAAGG
GAAGGAAATACCAATGGACATCCCCATGTGTTATAAGtatatttactttt
tcttgatGCATACTACAAATACAGTGTTGTATCATTTCGTCACTTAAATT
AACAGACTACATTTTAAAGATCGGAAACTTTTCCCACTTATTCTGGCTCT
AGGATAGACTTACAAATCATGAAAAACCTGTAGGTGTCATATGTTAACGT
AGACTatagtctacttttggctgaactttgctttttgataatttattatg
acgctgagtccagtgaagtagactagaggcGTTTCACtaggtcgccattt
tgagagaaaatgttaaaaatccaaataacaataaaactacttggagttga
gagatataatcaaaaatttgaaacaaacatcaataacagatttgcaatcc
cttattcccaaataaaaacattgcttcatactgtttttaccttccaaaaa
caactaaaatctggcggactgtttgcCTAGGCAAAAACATATTACCATAT
cataccgggccacttaattgGGCCATCCAGTCTAAATAAAAAGCTTCAAG
TGGGCCCCGGGCTAATGATAATGCAATAACTGTTAAAGGGATGATGGTAA
TTtgcataactttttttttaaattcaattggCTAAAGGGCTATTTACAGT
CCTATACACTACACAAAATATTGTTAGCAGGCAATATGTCGAGAATATAT
TGTTGAGTGttgacaatatattgaaaatgtgtccgcaatatattgtcagc
tcgatttgcaatatttcaGCAATACAGGGGAATTTTGGAGTTGaaataat
tcctttttataatagagacGAATCTTTGGCCGGAAAGGATTGGTTATTGG
CAGAGAAGGACAAAGAGATTGGAATACTGAAAACGAGGGTTTTGTCACAA
AGCGAACGCATTACGGAGCTTGAAGGGAAGGAAATACCAATGGACacaca
atcagggacaaaatgcttggcaaaaaagggaaattcaccggggtgttttg
aaaccacaatcgatttgtaagtgctctaaagtaggttcgaagggtagagt
tttaactctgagttttaacgctagacttaagact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029194XLOC_029194Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045666-exon-scaffold_100-1491911889:280733..280872TCONS_00045666-exon-scaffold_100-1491911889:280733..280872Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:280733..280872TCONS_00045666-exon-scaffold_100-1510915933:280733..280872Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:280733..280872TCONS_00045666-exon-scaffold_100-1575043694:280733..280872Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1491911889:284131..284170TCONS_00045666-exon-scaffold_100-1491911889:284131..284170Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:284131..284170TCONS_00045666-exon-scaffold_100-1510915933:284131..284170Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:284131..284170TCONS_00045666-exon-scaffold_100-1575043694:284131..284170Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1491911889:284788..284901TCONS_00045666-exon-scaffold_100-1491911889:284788..284901Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:284788..284901TCONS_00045666-exon-scaffold_100-1510915933:284788..284901Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:284788..284901TCONS_00045666-exon-scaffold_100-1575043694:284788..284901Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1491911889:303200..303352TCONS_00045666-exon-scaffold_100-1491911889:303200..303352Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:303200..303352TCONS_00045666-exon-scaffold_100-1510915933:303200..303352Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:303200..303352TCONS_00045666-exon-scaffold_100-1575043694:303200..303352Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1491911889:303981..304043TCONS_00045666-exon-scaffold_100-1491911889:303981..304043Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:303981..304043TCONS_00045666-exon-scaffold_100-1510915933:303981..304043Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:303981..304043TCONS_00045666-exon-scaffold_100-1575043694:303981..304043Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1491911889:304248..304468TCONS_00045666-exon-scaffold_100-1491911889:304248..304468Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:304248..304468TCONS_00045666-exon-scaffold_100-1510915933:304248..304468Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:304248..304468TCONS_00045666-exon-scaffold_100-1575043694:304248..304468Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1491911889:305248..305516TCONS_00045666-exon-scaffold_100-1491911889:305248..305516Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1510915933:305248..305516TCONS_00045666-exon-scaffold_100-1510915933:305248..305516Clytia hemisphaericaexon
TCONS_00045666-exon-scaffold_100-1575043694:305248..305516TCONS_00045666-exon-scaffold_100-1575043694:305248..305516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:280733..305516 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0.810645	0.00544181	0	0	5.48981e-06	0.00136206	0.102395	0.0321785	0	0.000239375	0.00688899	0.00583784	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045666 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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