TCONS_00045507 (transcript) - C. hemisphaerica

Overview
NameTCONS_00045507
Unique NameTCONS_00045507
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00045507 ID=TCONS_00045507|Name=TCONS_00045507|organism=Clytia hemisphaerica|type=transcript|length=211bp
TGAgaagtttttgaaagtggtcGAAATACACTGATCTAGGTACCAAAGGA
TATGAGCAACAGAGGAAATAGAATAGAGACATAAGTGTGCAGTAATGGAA
ACAGTATATTTCGAAACGTAAACAAGAATGCCGAAAATGTATGATAGAAC
TTGGGATGACATTGGGGATGCATCAAGATATATAACTCAGAGCCTAACCC
GTTTTGACGAC
Run BLAST on NCBI

transcript from alignment at sc0008117:69..279

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00045507 ID=TCONS_00045507|Name=TCONS_00045507|organism=Clytia hemisphaerica|type=transcript|length=211bp|location=Sequence derived from alignment at sc0008117:69..279 (Clytia hemisphaerica)
GTCGTCAAAACGGGTTAGGCTCTGAGTTATATATCTTGATGCATCCCCAA
TGTCATCCCAAGTTCTATCATACATTTTCGGCATTCTTGTTTACGTTTCG
AAATATACTGTTTCCATTACTGCACACTTATGTCTCTATTCTATTTCCTC
TGTTGCTCATATCCTTTGGTACCTAGATCAGTGTATTTCgaccactttca
aaaacttcTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_029084XLOC_029084Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00045507-exon-sc0008117-1491911889:69..279TCONS_00045507-exon-sc0008117-1491911889:69..279Clytia hemisphaericaexon
TCONS_00045507-exon-sc0008117-1510915933:69..279TCONS_00045507-exon-sc0008117-1510915933:69..279Clytia hemisphaericaexon
TCONS_00045507-exon-sc0008117-1575043694:69..279TCONS_00045507-exon-sc0008117-1575043694:69..279Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0008117supercontigsc0008117:69..279 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045507 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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