|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045358 ID=TCONS_00045358|Name=TCONS_00045358|organism=Clytia hemisphaerica|type=transcript|length=780bp
ATAAACCGTTTACCTACCGAATCTACAAATTGTAATATTTGTGGGCTGTC
CATGTTGAAAAGTTCAATCAAACGACACATTTCAACTAAACATGCCGATG
ATTTGCCCCCAAAAGCAATTTGTGTGGACAGGGAGAACGCTATCTTTATG
GTCATGAAAAGTACAACAGGCTTGCCATTCCCGATCCATGTCCAGAAGCT
AATACATGTTGAGGATCCCAAAATTATATGTGAGTCAACCGATTGCAACA
TTATTTTTGGAGTTTCCAGTTTGAGTAACCGAAAGGCTACCTTTTGTGAT
CATTTGCGTGATGTAGATGACAAAGTTGAGTATCCCAAATTATTTCAGCT
CACAGAAGAACTTATTAGAGAGGCGGCAAGTGAAGATAGCACGATTAGAA
TTCTGAAAGAAGAAACTATTGACAAATGTGTTCATTTGCTTCATTCGGCG
AGAGAACAATCGAAACAAGCCATTGTTCCCTGGGTATTTGAAAGTTATAT
CCACATGTCGGTTTTTTCTGAGAAAGTGCATTACAATGCGAAACTTCAAA
GATTTGTAGTTAGTTATAATCGATCGTCTGGACAATTTGATTGCAGGTGT
AACAAACGAAAGTATGTTTGTGTTCACAAAGCAATTGCACTTTTGTTTCT
TCAAATCCAAAACCTTGTATCATGTCGCACAGAAttggaaattctttttg
aaaattgtcatGCTGAGACGCCAAGCAAAGATAGGAATTCTGGGGATATA
ATAACAATGTCAGGTGTAGTCGACAAACAG Run BLAST on NCBI protein sequence of TCONS_00045358-protein >TCONS_00045358-protein ID=TCONS_00045358-protein|Name=TCONS_00045358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
INRLPTESTNCNICGLSMLKSSIKRHISTKHADDLPPKAICVDRENAIFM
VMKSTTGLPFPIHVQKLIHVEDPKIICESTDCNIIFGVSSLSNRKATFCD
HLRDVDDKVEYPKLFQLTEELIREAASEDSTIRILKEETIDKCVHLLHSA
REQSKQAIVPWVFESYIHMSVFSEKVHYNAKLQRFVVSYNRSSGQFDCRC
NKRKYVCVHKAIALLFLQIQNLVSCRTELEILFENCHAETPSKDRNSGDI
ITMSGVVDKQ Run BLAST on NCBI transcript from alignment at sc0007597:36..815 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045358 ID=TCONS_00045358|Name=TCONS_00045358|organism=Clytia hemisphaerica|type=transcript|length=780bp|location=Sequence derived from alignment at sc0007597:36..815 (Clytia hemisphaerica)
CTGTTTGTCGACTACACCTGACATTGTTATTATATCCCCAGAATTCCTAT
CTTTGCTTGGCGTCTCAGCatgacaattttcaaaaagaatttccaaTTCT
GTGCGACATGATACAAGGTTTTGGATTTGAAGAAACAAAAGTGCAATTGC
TTTGTGAACACAAACATACTTTCGTTTGTTACACCTGCAATCAAATTGTC
CAGACGATCGATTATAACTAACTACAAATCTTTGAAGTTTCGCATTGTAA
TGCACTTTCTCAGAAAAAACCGACATGTGGATATAACTTTCAAATACCCA
GGGAACAATGGCTTGTTTCGATTGTTCTCTCGCCGAATGAAGCAAATGAA
CACATTTGTCAATAGTTTCTTCTTTCAGAATTCTAATCGTGCTATCTTCA
CTTGCCGCCTCTCTAATAAGTTCTTCTGTGAGCTGAAATAATTTGGGATA
CTCAACTTTGTCATCTACATCACGCAAATGATCACAAAAGGTAGCCTTTC
GGTTACTCAAACTGGAAACTCCAAAAATAATGTTGCAATCGGTTGACTCA
CATATAATTTTGGGATCCTCAACATGTATTAGCTTCTGGACATGGATCGG
GAATGGCAAGCCTGTTGTACTTTTCATGACCATAAAGATAGCGTTCTCCC
TGTCCACACAAATTGCTTTTGGGGGCAAATCATCGGCATGTTTAGTTGAA
ATGTGTCGTTTGATTGAACTTTTCAACATGGACAGCCCACAAATATTACA
ATTTGTAGATTCGGTAGGTAAACGGTTTAT Coding sequence (CDS) from alignment at sc0007597:36..815 >TCONS_00045358 ID=TCONS_00045358|Name=TCONS_00045358|organism=Clytia hemisphaerica|type=CDS|length=780bp|location=Sequence derived from alignment at sc0007597:36..815 (Clytia hemisphaerica)
CTGTTTGTCGACTACACCTGACATTGTTATTATATCCCCAGAATTCCTAT
CTTTGCTTGGCGTCTCAGCatgacaattttcaaaaagaatttccaaTTCT
GTGCGACATGATACAAGGTTTTGGATTTGAAGAAACAAAAGTGCAATTGC
TTTGTGAACACAAACATACTTTCGTTTGTTACACCTGCAATCAAATTGTC
CAGACGATCGATTATAACTAACTACAAATCTTTGAAGTTTCGCATTGTAA
TGCACTTTCTCAGAAAAAACCGACATGTGGATATAACTTTCAAATACCCA
GGGAACAATGGCTTGTTTCGATTGTTCTCTCGCCGAATGAAGCAAATGAA
CACATTTGTCAATAGTTTCTTCTTTCAGAATTCTAATCGTGCTATCTTCA
CTTGCCGCCTCTCTAATAAGTTCTTCTGTGAGCTGAAATAATTTGGGATA
CTCAACTTTGTCATCTACATCACGCAAATGATCACAAAAGGTAGCCTTTC
GGTTACTCAAACTGGAAACTCCAAAAATAATGTTGCAATCGGTTGACTCA
CATATAATTTTGGGATCCTCAACATGTATTAGCTTCTGGACATGGATCGG
GAATGGCAAGCCTGTTGTACTTTTCATGACCATAAAGATAGCGTTCTCCC
TGTCCACACAAATTGCTTTTGGGGGCAAATCATCGGCATGTTTAGTTGAA
ATGTGTCGTTTGATTGAACTTTTCAACATGGACAGCCCACAAATATTACA
ATTTGTAGATTCGGTAGGTAAACGGTTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045358-exon-sc0007597-1491911889:36..815 | TCONS_00045358-exon-sc0007597-1491911889:36..815 | Clytia hemisphaerica | exon |
| TCONS_00045358-exon-sc0007597-1510915933:36..815 | TCONS_00045358-exon-sc0007597-1510915933:36..815 | Clytia hemisphaerica | exon |
| TCONS_00045358-exon-sc0007597-1575043694:36..815 | TCONS_00045358-exon-sc0007597-1575043694:36..815 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007597 | supercontig | sc0007597:36..815 . |
Blast
The following BLAST results are available for this feature:
|
