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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045301 ID=TCONS_00045301|Name=TCONS_00045301|organism=Clytia hemisphaerica|type=transcript|length=913bp
GTTGAACTTTGTCAGCTAAAGGGACTGCTGTCCAGAGGAAACCATgatga
aaagaaagaacaaaGTTCATCCAAGGAATTTGAGAGCCACGGGCGAAATT
ACCGGCGCCGACTTTGCAAAACCNAGGGACTGCTGTCCAGAGGAAACCAT
gatgaaaagaaagaacaaaGTTCATCAAAGGAATTTGAGAACCACGGGCG
AAATTACCGGCGCCGACTTTGCAAAACATGTCTAACTTTGAGTGACCAAG
GAATCGATGTGGGTACGTGTGACCATTGCTACTCCTGCGGATCCAGTGAC
CACTATCGAGCTGGTTGCAAAGGAAAAAACTAGCAACAGTTGGTTCGATG
TGGGGCAAAGCAACTGTAATTGGACATCCCACAAATCAAAGCCATTTAAC
AGAAAGTTTGGAAGGAAATCATGTTTGGGAGAATGTTTGTGATACTGNAT
AAAAAACTAGCAACAGTTGCTTCGATGTGGGGCAAAGCAACTGTAATTGG
ACATCCCACAAATCAAAGCCATTTAACAGAAAGTTTGGAAGGAAATCATG
TTTGGGAGAATGTTTGTGATACTGAAACAAGTCAAAACGATGTCTACAAG
TATGAAAGGTATGATCAAACTTCTGTTTCTGGTTTGGAAACTCCTGAGGA
AAAAAAGGAGAAGCATGTTCGATTTGTTTATAGTCCATTGCCTGATTCTT
TGCCTGCGGATCCTGACTTGTCCACTGTAAATATTTCACTTTCCGATAAA
TGTCCGTCAACCAACCCATTTAAATCTCAGAATTCACTTCCAAGTTGCTT
AAAATTAAGATCAAATAACCCATTTTTGCCGTCAAGACCAGTGCTAAAGC
ATACAGCAAGCCATTTTGAAATCATGAAGCCGCAGCCTCTCAGTTCGCAG
CAAGCACAATGCA Run BLAST on NCBI protein sequence of TCONS_00045301-protein >TCONS_00045301-protein ID=TCONS_00045301-protein|Name=TCONS_00045301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MFGRMFVILXKKLATVASMWGKATVIGHPTNQSHLTESLEGNHVWENVCD
TETSQNDVYKYERYDQTSVSGLETPEEKKEKHVRFVYSPLPDSLPADPDL
STVNISLSDKCPSTNPFKSQNSLPSCLKLRSNNPFLPSRPVLKHTASHFE
IMKPQPLSSQQAQC Run BLAST on NCBI transcript from alignment at sc0007454:1..913 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045301 ID=TCONS_00045301|Name=TCONS_00045301|organism=Clytia hemisphaerica|type=transcript|length=913bp|location=Sequence derived from alignment at sc0007454:1..913 (Clytia hemisphaerica)
TGCATTGTGCTTGCTGCGAACTGAGAGGCTGCGGCTTCATGATTTCAAAA
TGGCTTGCTGTATGCTTTAGCACTGGTCTTGACGGCAAAAATGGGTTATT
TGATCTTAATTTTAAGCAACTTGGAAGTGAATTCTGAGATTTAAATGGGT
TGGTTGACGGACATTTATCGGAAAGTGAAATATTTACAGTGGACAAGTCA
GGATCCGCAGGCAAAGAATCAGGCAATGGACTATAAACAAATCGAACATG
CTTCTCCTTTTTTTCCTCAGGAGTTTCCAAACCAGAAACAGAAGTTTGAT
CATACCTTTCATACTTGTAGACATCGTTTTGACTTGTTTCAGTATCACAA
ACATTCTCCCAAACATGATTTCCTTCCAAACTTTCTGTTAAATGGCTTTG
ATTTGTGGGATGTCCAATTACAGTTGCTTTGCCCCACATCGAAGCAACTG
TTGCTAGTTTTTTATNCAGTATCACAAACATTCTCCCAAACATGATTTCC
TTCCAAACTTTCTGTTAAATGGCTTTGATTTGTGGGATGTCCAATTACAG
TTGCTTTGCCCCACATCGAACCAACTGTTGCTAGTTTTTTCCTTTGCAAC
CAGCTCGATAGTGGTCACTGGATCCGCAGGAGTAGCAATGGTCACACGTA
CCCACATCGATTCCTTGGTCACTCAAAGTTAGACATGTTTTGCAAAGTCG
GCGCCGGTAATTTCGCCCGTGGTTCTCAAATTCCTTTGATGAACtttgtt
ctttcttttcatcATGGTTTCCTCTGGACAGCAGTCCCTNGGTTTTGCAA
AGTCGGCGCCGGTAATTTCGCCCGTGGCTCTCAAATTCCTTGGATGAACt
ttgttctttcttttcatcATGGTTTCCTCTGGACAGCAGTCCCTTTAGCT
GACAAAGTTCAAC Coding sequence (CDS) from alignment at sc0007454:1..913 >TCONS_00045301 ID=TCONS_00045301|Name=TCONS_00045301|organism=Clytia hemisphaerica|type=CDS|length=492bp|location=Sequence derived from alignment at sc0007454:1..913 (Clytia hemisphaerica)
GCATTGTGCTTGCTGCGAACTGAGAGGCTGCGGCTTCATGATTTCAAAAT
GGCTTGCTGTATGCTTTAGCACTGGTCTTGACGGCAAAAATGGGTTATTT
GATCTTAATTTTAAGCAACTTGGAAGTGAATTCTGAGATTTAAATGGGTT
GGTTGACGGACATTTATCGGAAAGTGAAATATTTACAGTGGACAAGTCAG
GATCCGCAGGCAAAGAATCAGGCAATGGACTATAAACAAATCGAACATGC
TTCTCCTTTTTTTCCTCAGGAGTTTCCAAACCAGAAACAGAAGTTTGATC
ATACCTTTCATACTTGTAGACATCGTTTTGACTTGTTTCAGTATCACAAA
CATTCTCCCAAACATGATTTCCTTCCAAACTTTCTGTTAAATGGCTTTGA
TTTGTGGGATGTCCAATTACAGTTGCTTTGCCCCACATCGAAGCAACTGT
TGCTAGTTTTTTATNCAGTATCACAAACATTCTCCCAAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045301-exon-sc0007454-1491911889:1..913 | TCONS_00045301-exon-sc0007454-1491911889:1..913 | Clytia hemisphaerica | exon |
| TCONS_00045301-exon-sc0007454-1510915933:1..913 | TCONS_00045301-exon-sc0007454-1510915933:1..913 | Clytia hemisphaerica | exon |
| TCONS_00045301-exon-sc0007454-1575043694:1..913 | TCONS_00045301-exon-sc0007454-1575043694:1..913 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007454 | supercontig | sc0007454:1..913 . |
Blast
The following BLAST results are available for this feature:
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