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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045166 ID=TCONS_00045166|Name=TCONS_00045166|organism=Clytia hemisphaerica|type=transcript|length=948bp
aaaagaaaaaatatattttatatgtTTATTAGTACTCGAAGCAAGTAGAA
TTGGTGAAGTGAGTGCTTATATCAGCAAAATAGACATTGTATTGAAATGG
CTTGTGTTGGTTGTTTGTTTGATAAATTGCAGAATAATGCGTGTTATGAT
GGGTGGGTGGAGGAAAAAGTGAATAAATGCTGTTCTTCAATTCGTTTATG
AAACGTGTTCCTACTACAACTATTGCTGACCTGACCTGACCTATATATAT
TGTTCACTGCTTCATATTGAAGATTCATTCTTGAATGTCGAATTTCTCAC
TCTTGATGTATAATGACTTCACTGTTTCTGGACATGTACATATCATCATC
TCTCTGATAGCTACATCTTGCATACTTGATACTCTGTATAACCTGTTGAT
TGATATGCAAATATTACAATCTTGCAACGCTGCAGATAACCACACTATTA
TTCTGCAAATAACTATCTACtcataaagaatcaaaatcTATAACTCGAAA
GACTTTGAAGACTAGAGTAGCATCAAGAACACATAGTATTACAGACATTC
AACTATTGTTTACCCAAGAACACTTGTGAACTCCAAAGGACAAACGATTT
CAACCACAAGAAATATGACGTcatatactttcactttcctCTACCCTTCA
ATTGACTGGTGGTGGTTTGATAGTTTGCTAAAGGCTAACTGGTGTGTGGC
TTCTTGTTCCTTCAATGGCTCACAATGTGAATGGAAGCAATTTGAATATA
AAGGACACTTCACCTATTAATATTGCATTAGttatttgttcgatttttta
agGTTCTATAATATTTTATCAGTTGCGAGGTTAAGCTACTGGTTGGAATG
CACGGTTGCTTTAAAGATACTTTTCAAAGGCCCGATTCAAAGGTAATGAT
TTTAATCCCTTCAaattttgaatcacttttgacCACAATTAATCAAAC Run BLAST on NCBI transcript from alignment at sc0007121:179..1126 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045166 ID=TCONS_00045166|Name=TCONS_00045166|organism=Clytia hemisphaerica|type=transcript|length=948bp|location=Sequence derived from alignment at sc0007121:179..1126 (Clytia hemisphaerica)
GTTTGATTAATTGTGgtcaaaagtgattcaaaattTGAAGGGATTAAAAT
CATTACCTTTGAATCGGGCCTTTGAAAAGTATCTTTAAAGCAACCGTGCA
TTCCAACCAGTAGCTTAACCTCGCAACTGATAAAATATTATAGAACctta
aaaaatcgaacaaataaCTAATGCAATATTAATAGGTGAAGTGTCCTTTA
TATTCAAATTGCTTCCATTCACATTGTGAGCCATTGAAGGAACAAGAAGC
CACACACCAGTTAGCCTTTAGCAAACTATCAAACCACCACCAGTCAATTG
AAGGGTAGaggaaagtgaaagtatatgACGTCATATTTCTTGTGGTTGAA
ATCGTTTGTCCTTTGGAGTTCACAAGTGTTCTTGGGTAAACAATAGTTGA
ATGTCTGTAATACTATGTGTTCTTGATGCTACTCTAGTCTTCAAAGTCTT
TCGAGTTATAgattttgattctttatgaGTAGATAGTTATTTGCAGAATA
ATAGTGTGGTTATCTGCAGCGTTGCAAGATTGTAATATTTGCATATCAAT
CAACAGGTTATACAGAGTATCAAGTATGCAAGATGTAGCTATCAGAGAGA
TGATGATATGTACATGTCCAGAAACAGTGAAGTCATTATACATCAAGAGT
GAGAAATTCGACATTCAAGAATGAATCTTCAATATGAAGCAGTGAACAAT
ATATATAGGTCAGGTCAGGTCAGCAATAGTTGTAGTAGGAACACGTTTCA
TAAACGAATTGAAGAACAGCATTTATTCACTTTTTCCTCCACCCACCCAT
CATAACACGCATTATTCTGCAATTTATCAAACAAACAACCAACACAAGCC
ATTTCAATACAATGTCTATTTTGCTGATATAAGCACTCACTTCACCAATT
CTACTTGCTTCGAGTACTAATAAacatataaaatatattttttctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045166-exon-sc0007121-1491911889:179..1126 | TCONS_00045166-exon-sc0007121-1491911889:179..1126 | Clytia hemisphaerica | exon |
| TCONS_00045166-exon-sc0007121-1510915933:179..1126 | TCONS_00045166-exon-sc0007121-1510915933:179..1126 | Clytia hemisphaerica | exon |
| TCONS_00045166-exon-sc0007121-1575043694:179..1126 | TCONS_00045166-exon-sc0007121-1575043694:179..1126 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0007121 | supercontig | sc0007121:179..1126 . |
Blast
The following BLAST results are available for this feature:
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