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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045114 ID=TCONS_00045114|Name=TCONS_00045114|organism=Clytia hemisphaerica|type=transcript|length=966bp
TATAactataagcaaaaagctcgtacccatgtctgtttttagctgttaaa
atataataatttaaGTAAGTTGTTTATTGGAGATAATCTCCTCCTCTACA
AAATCTAGGGAGCCACATGTTATATCCATAACATGTGTATCAAATCAAAT
CAGAAAGGAAATCATTTTGCTAATTGAAAGATAACCATCTTATAATCATT
GGCACACTTCAACCAAGCTAACCAGGTCCAGAAAAAAGATAACCANAGAA
AGGAAATCATTTTGCTAATTGAAAGATAACCATCTTATAATCATTGGCAC
ACTTCAACCGAGCTAACCAGGTCCAGAAAAAAGATAACCGCATGCTCCAA
GTTTTTAGCACCTCTGCTGACAGAGGTTCATGGTTAGTTCAGAAGCAATG
ctgcaaatagggaaatttcagttggccggtaattttTCGAGTGTAAGGAG
CAGGGGGTCTGGCGGAAACATCTTTGTAGTTTGATATTACAGATTGACTT
ATTGGATTattagattggctaaacacctattttaATATAAAAACTGTTTC
TCTTTTAATTTCCAATTTTAGAAGCGCTATTAAGTATTTAACTAGGCctc
taatcttcaaattttaaccggacaaaatgaaaaactgtgCTTCATAATTG
CcgtaattaccggtcaccggccgttatttgcagcactgcagAAGAAATCT
CCTGGTCTCATACATAATTGCAGTTAAAAAGATTTCTGcaacaatgataa
aaaaaatctgccAGAGAAGGTTGAAcgaatttacataattttgtcACATA
TCCAAAAGTAAGGCCACTGTGTTGTTGTGTTGTTGTTTACAtaattgtaa
attttcaaaaacaccccAAGATATTCACACAAGGAACAAGTGAGCAAAAT
TTAAGCCAaatctgatcatttttgaagtctccagtctGTCCCAAAGTTTT
ATAGACATACTGACTG Run BLAST on NCBI transcript from alignment at sc0006957:2..967 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045114 ID=TCONS_00045114|Name=TCONS_00045114|organism=Clytia hemisphaerica|type=transcript|length=966bp|location=Sequence derived from alignment at sc0006957:2..967 (Clytia hemisphaerica)
CAGTCAGTATGTCTATAAAACTTTGGGACagactggagacttcaaaaatg
atcagattTGGCTTAAATTTTGCTCACTTGTTCCTTGTGTGAATATCTTg
gggtgtttttgaaaatttacaattaTGTAAACAACAACACAACAACACAG
TGGCCTTACTTTTGGATATGTgacaaaattatgtaaattcgTTCAACCTT
CTCTggcagattttttttatcattgttgCAGAAATCTTTTTAACTGCAAT
TATGTATGAGACCAGGAGATTTCTTctgcagtgctgcaaataacggccgg
tgaccggtaattacgGCAATTATGAAGcacagtttttcattttgtccggt
taaaatttgaagattagagGCCTAGTTAAATACTTAATAGCGCTTCTAAA
ATTGGAAATTAAAAGAGAAACAGTTTTTATATtaaaataggtgtttagcc
aatctaatAATCCAATAAGTCAATCTGTAATATCAAACTACAAAGATGTT
TCCGCCAGACCCCCTGCTCCTTACACTCGAaaaattaccggccaactgaa
atttccctatttgcagCATTGCTTCTGAACTAACCATGAACCTCTGTCAG
CAGAGGTGCTAAAAACTTGGAGCATGCGGTTATCTTTTTTCTGGACCTGG
TTAGCTCGGTTGAAGTGTGCCAATGATTATAAGATGGTTATCTTTCAATT
AGCAAAATGATTTCCTTTCTNTGGTTATCTTTTTTCTGGACCTGGTTAGC
TTGGTTGAAGTGTGCCAATGATTATAAGATGGTTATCTTTCAATTAGCAA
AATGATTTCCTTTCTGATTTGATTTGATACACATGTTATGGATATAACAT
GTGGCTCCCTAGATTTTGTAGAGGAGGAGATTATCTCCAATAAACAACTT
ACttaaattattatattttaacagctaaaaacagacatgggtacgagctt
tttgcttatagtTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045114-exon-sc0006957-1491911889:2..967 | TCONS_00045114-exon-sc0006957-1491911889:2..967 | Clytia hemisphaerica | exon |
| TCONS_00045114-exon-sc0006957-1510915933:2..967 | TCONS_00045114-exon-sc0006957-1510915933:2..967 | Clytia hemisphaerica | exon |
| TCONS_00045114-exon-sc0006957-1575043694:2..967 | TCONS_00045114-exon-sc0006957-1575043694:2..967 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006957 | supercontig | sc0006957:2..967 . |
Blast
The following BLAST results are available for this feature:
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