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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045071 ID=TCONS_00045071|Name=TCONS_00045071|organism=Clytia hemisphaerica|type=transcript|length=1066bp
atcaaaatggtagaaaaaAGAGAGAAGGGCGATACACTACTGCGGGTGTT
GATTCTTTGCTTTCGATTGATGGGCATGACAAGTTGATGGGTTACCAAAA
CTCAACGTTTCCCATTGCAGTGTATGGAATGCTAGACCAGGCTAGTAGGA
AAATACTAATCCTCAGATGTTGGACGACCAATAGCAATCCTGACGTTGTC
GGCCATTGGTACCTGGAATTGTTAAAGGAATCAAAAATATTGCCTGGTAG
TATGAGATGTGACCGTGGCACAGAAACTGGCAAATTGGTAACAATTCATG
GTTATCTAAGAGCTCAAGTTGGAGCTCTCACTGACCCTGTTGATTCAATC
ATATATGGCACTTCAACCACTAACCAGGTACTAGGGCTTGCCTAAgcctg
tacacgtttttttataggcTTCAAAGAAtaggtcaaaaaattaagaacat
gctaagaacatttagAGGCTTCAAGAGTAAGAAAGAAGaacatttgtttg
tttttgattatgtacacatgtttcaataaaaagtaaaaaggcTCTTAATC
CAGCTGACTTAATAAGTGAGGAAAATCACATTTCACGCCAATTAAGTCCC
CCATGAGCAAACTTTTGAGACTTAAATTAATAGACTTAATTactgtaaga
acattttaaggcttgaaaccaaaaaagctaagaacattgaaGGCTTCTTc
gattttgaatgttcttataaaaaaaatgtgtatgtgGTAGAtcaggcagt
tagtcacactaggaaatcaagctttcagaaaaaacaacatcagtcatcta
caggatgtatttgcaacaacaaggatgagaattacctgaatcaagttcaa
gatcccaaaACAATCAatttaaacttgaaaacttaaaatgagacaaaatg
acagattgcgaattagatgagggatgtcgacattagacaaaCTTACGGTA
GAGTGTGGACAtgaaatttaatctttttttatgAAGTTAACATGACTGTC
AGCAGAGGTTGCATAGTTTGAACCCATAGTTTTTTCTTAAGGGGGGGGGT
CGCAAATTTTCCAGAG Run BLAST on NCBI transcript from alignment at sc0006828:16..1114+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045071 ID=TCONS_00045071|Name=TCONS_00045071|organism=Clytia hemisphaerica|type=transcript|length=1099bp|location=Sequence derived from alignment at sc0006828:16..1114+ (Clytia hemisphaerica)
atcaaaatggtagaaaaaAGAGAGAAGGGCGATACACTACTGCGGGTGTT
GATTCTTTGCTTTCGATTGATGGGCATGACAAGTTGATGGGTTACCAAAA
CTCAACGTTTCCCATTGCAGTGTATGGAATGCTAGACCAGGCTAGTAGGA
AAATACTAATCCTCAGATGTTGGACGACCAATAGCAATCCTGACGTTGTC
GGCCATTGGTACCTGGAATTGTTAAAGGAATCAAAAATATTGCCTGGTAG
TATGAGATGTGACCGTGGCACAGAAACTGGCAAATTGGTAACAATTCATG
GTTATCTAAGAGCTCAAGTTGGAGCTCTCACTGACCCTGTTGATTCAATC
ATATATGGCACTTCAACCACTAACCAGGTACTAGGGCTTGCCTAAgcctg
tacacgtttttttataggcTTCAAAGAAtaggtcaaaaaattaagaacat
gctaagaacatttagAGGCTTCAAGAGTAAGAAAGAAGaacatttgtttg
tttttgattatgtacacatgtttcaataaaaagtaaaaaggcTCTTAATC
CAGCTGACTTAATAAGTGAGGAAAATCACATTTCACGCCAATTAAGTCCC
CCATGAGCAAACTTTTGAGACTTAAATTAATAGACTTAATTactgtaaga
acattttaaggcttgaaaccaaaaaagctaagaacattgaaGGCTTCTTc
gattttgaatgttcttataaaaaaaatgtgtatgtgGTAGAtcaggcagt
tagtcacactaggaaatcaagctttcagaaaaaacaacatcagtcatcta
caggatgtatttgcaacaacaaggatgagaattacctgaatcaagttcaa
gatcccaaaACAATCAatttaaacttgaaaacttaaaatgagacaaaatg
acagattgcgaattagatgagggatgtcgacattagacaaaCTTACGGTA
GAGTGTGGACAtgaaatttaatctttttttatgAAGTTAACATGACTGTC
AGCAGAGGTTGCATAGTTTGAACCCATAGTTTTTTCTTAAGGGGTGGGGT
TGACACCTTCGGGGAAACCCAAGAAGGGGGGGTCGCAAATTTTCCAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045071-exon-sc0006828-1491911889:16..1058 | TCONS_00045071-exon-sc0006828-1491911889:16..1058 | Clytia hemisphaerica | exon |
| TCONS_00045071-exon-sc0006828-1510915933:16..1058 | TCONS_00045071-exon-sc0006828-1510915933:16..1058 | Clytia hemisphaerica | exon |
| TCONS_00045071-exon-sc0006828-1575043694:16..1058 | TCONS_00045071-exon-sc0006828-1575043694:16..1058 | Clytia hemisphaerica | exon |
| TCONS_00045071-exon-sc0006828-1491911889:1092..1114 | TCONS_00045071-exon-sc0006828-1491911889:1092..1114 | Clytia hemisphaerica | exon |
| TCONS_00045071-exon-sc0006828-1510915933:1092..1114 | TCONS_00045071-exon-sc0006828-1510915933:1092..1114 | Clytia hemisphaerica | exon |
| TCONS_00045071-exon-sc0006828-1575043694:1092..1114 | TCONS_00045071-exon-sc0006828-1575043694:1092..1114 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006828 | supercontig | sc0006828:16..1114 + |
Blast
The following BLAST results are available for this feature:
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