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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045042 ID=TCONS_00045042|Name=TCONS_00045042|organism=Clytia hemisphaerica|type=transcript|length=999bp
AGTCAGACAGCAGTTTTGTCCACGATTGTAGATCCCCACTACTAGCACTT
AGctccaatgaaagaaagtgtcTGGAGATCGGGACGAAGTTTGATTCATA
CCACAATTATATAGCGCAAGAGACAAAAaccaaaactcaaaaaacttacA
TTTAGTGGCTGGTGGACTAGATAGAGGTACGTCGTAACAATAACCAGATG
AAGCTGGACATGTGTCGTTCAATGTACATCCAAACTCAGAACAAGTTTTT
CCACCAAAGCCTTCAGAACACTGGCAGGTGAAATCGTTCCATTGGTCTAC
ACAGGTCCCGTTGTAAAGGCATGGTTTAGAATCGCAGACTGGAGTTCCCG
GACAGCCTAACTGGAATCCTGGTTCACTGTCTGGTATTATGACGCTGACG
GTAAAACTAGAAGGGATAGCTTGGTTGGTCAAGAAATTATTACCAAATTT
GACGGCTTGCAAACAGCCACTCATAGCCGTAGTAGAGACGGTTTTGATGT
AAAGCGAAGGCTTATCCACACCACCCATTAAAACCAAATTGACTGTTAAA
GGGAAAGGTGTTTGGAAATCAGTTTTCTTTGCACCAATTTGAAGATATGA
TGATGTGACCGTGATTTCTAGCTGTTGGCCATTGGACACAAACAGCTCTG
GCGATTCATTGTGGATGACTTTGACGGCATTCTGGTCTGTACTTTTATGG
GTGATTTTCAAATATGAGTTGATGATTTCGATGAGAATGTATTGGAAAGT
GGCATCGTCAGCACTGGTCGGTTCTTTATCCATCAAGATGGCTACAAATC
CGTTCGGTTGCCGTGTCCGGAGTAGGAAAGAGAAACCGTGTGTTGAGTTC
ATCTTGTAGTAGTTTTCTGTTAGTTTTGAACGAACGTAAAGGTTGGACGA
TGTTTCTGTTGAGCGACGTCGTCGTCGtactttgtttgttttgttttgag
caaCAACAGTTTTTGCAGGAAGTTGAAATCCAAATGATTTAATTTCTGA Run BLAST on NCBI protein sequence of TCONS_00045042-protein >TCONS_00045042-protein ID=TCONS_00045042-protein|Name=TCONS_00045042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
SEIKSFGFQLPAKTVVAQNKTNKVRRRRRSTETSSNLYVRSKLTENYYKM
NSTHGFSFLLRTRQPNGFVAILMDKEPTSADDATFQYILIEIINSYLKIT
HKSTDQNAVKVIHNESPELFVSNGQQLEITVTSSYLQIGAKKTDFQTPFP
LTVNLVLMGGVDKPSLYIKTVSTTAMSGCLQAVKFGNNFLTNQAIPSSFT
VSVIIPDSEPGFQLGCPGTPVCDSKPCLYNGTCVDQWNDFTCQCSEGFGG
KTCSEFGCTLNDTCPASSGYCYDVPLSSPPATKCKFFEFWFLSLALYNCG
MNQTSSRSPDTFFHWS Run BLAST on NCBI transcript from alignment at sc0006749:150..1148 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045042 ID=TCONS_00045042|Name=TCONS_00045042|organism=Clytia hemisphaerica|type=transcript|length=999bp|location=Sequence derived from alignment at sc0006749:150..1148 (Clytia hemisphaerica)
TCAGAAATTAAATCATTTGGATTTCAACTTCCTGCAAAAACTGTTGttgc
tcaaaacaaaacaaacaaagtaCGACGACGACGTCGCTCAACAGAAACAT
CGTCCAACCTTTACGTTCGTTCAAAACTAACAGAAAACTACTACAAGATG
AACTCAACACACGGTTTCTCTTTCCTACTCCGGACACGGCAACCGAACGG
ATTTGTAGCCATCTTGATGGATAAAGAACCGACCAGTGCTGACGATGCCA
CTTTCCAATACATTCTCATCGAAATCATCAACTCATATTTGAAAATCACC
CATAAAAGTACAGACCAGAATGCCGTCAAAGTCATCCACAATGAATCGCC
AGAGCTGTTTGTGTCCAATGGCCAACAGCTAGAAATCACGGTCACATCAT
CATATCTTCAAATTGGTGCAAAGAAAACTGATTTCCAAACACCTTTCCCT
TTAACAGTCAATTTGGTTTTAATGGGTGGTGTGGATAAGCCTTCGCTTTA
CATCAAAACCGTCTCTACTACGGCTATGAGTGGCTGTTTGCAAGCCGTCA
AATTTGGTAATAATTTCTTGACCAACCAAGCTATCCCTTCTAGTTTTACC
GTCAGCGTCATAATACCAGACAGTGAACCAGGATTCCAGTTAGGCTGTCC
GGGAACTCCAGTCTGCGATTCTAAACCATGCCTTTACAACGGGACCTGTG
TAGACCAATGGAACGATTTCACCTGCCAGTGTTCTGAAGGCTTTGGTGGA
AAAACTTGTTCTGAGTTTGGATGTACATTGAACGACACATGTCCAGCTTC
ATCTGGTTATTGTTACGACGTACCTCTATCTAGTCCACCAGCCACTAAAT
gtaagttttttgagttttggtTTTTGTCTCTTGCGCTATATAATTGTGGT
ATGAATCAAACTTCGTCCCGATCTCCAgacactttctttcattggagCTA
AGTGCTAGTAGTGGGGATCTACAATCGTGGACAAAACTGCTGTCTGACT Coding sequence (CDS) from alignment at sc0006749:150..1148 >TCONS_00045042 ID=TCONS_00045042|Name=TCONS_00045042|organism=Clytia hemisphaerica|type=CDS|length=951bp|location=Sequence derived from alignment at sc0006749:150..1148 (Clytia hemisphaerica)
TCAGAAATTAAATCATTTGGATTTCAACTTCCTGCAAAAACTGTTGttgc
tcaaaacaaaacaaacaaagtaCGACGACGACGTCGCTCAACAGAAACAT
CGTCCAACCTTTACGTTCGTTCAAAACTAACAGAAAACTACTACAAGATG
AACTCAACACACGGTTTCTCTTTCCTACTCCGGACACGGCAACCGAACGG
ATTTGTAGCCATCTTGATGGATAAAGAACCGACCAGTGCTGACGATGCCA
CTTTCCAATACATTCTCATCGAAATCATCAACTCATATTTGAAAATCACC
CATAAAAGTACAGACCAGAATGCCGTCAAAGTCATCCACAATGAATCGCC
AGAGCTGTTTGTGTCCAATGGCCAACAGCTAGAAATCACGGTCACATCAT
CATATCTTCAAATTGGTGCAAAGAAAACTGATTTCCAAACACCTTTCCCT
TTAACAGTCAATTTGGTTTTAATGGGTGGTGTGGATAAGCCTTCGCTTTA
CATCAAAACCGTCTCTACTACGGCTATGAGTGGCTGTTTGCAAGCCGTCA
AATTTGGTAATAATTTCTTGACCAACCAAGCTATCCCTTCTAGTTTTACC
GTCAGCGTCATAATACCAGACAGTGAACCAGGATTCCAGTTAGGCTGTCC
GGGAACTCCAGTCTGCGATTCTAAACCATGCCTTTACAACGGGACCTGTG
TAGACCAATGGAACGATTTCACCTGCCAGTGTTCTGAAGGCTTTGGTGGA
AAAACTTGTTCTGAGTTTGGATGTACATTGAACGACACATGTCCAGCTTC
ATCTGGTTATTGTTACGACGTACCTCTATCTAGTCCACCAGCCACTAAAT
gtaagttttttgagttttggtTTTTGTCTCTTGCGCTATATAATTGTGGT
ATGAATCAAACTTCGTCCCGATCTCCAgacactttctttcattggagCTA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045042-exon-sc0006749-1491911889:150..1148 | TCONS_00045042-exon-sc0006749-1491911889:150..1148 | Clytia hemisphaerica | exon |
| TCONS_00045042-exon-sc0006749-1510915933:150..1148 | TCONS_00045042-exon-sc0006749-1510915933:150..1148 | Clytia hemisphaerica | exon |
| TCONS_00045042-exon-sc0006749-1575043694:150..1148 | TCONS_00045042-exon-sc0006749-1575043694:150..1148 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006749 | supercontig | sc0006749:150..1148 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
Blast
The following BLAST results are available for this feature:
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