TCONS_00045042-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045042-protein
Unique NameTCONS_00045042-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045042-protein ID=TCONS_00045042-protein|Name=TCONS_00045042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
SEIKSFGFQLPAKTVVAQNKTNKVRRRRRSTETSSNLYVRSKLTENYYKM
NSTHGFSFLLRTRQPNGFVAILMDKEPTSADDATFQYILIEIINSYLKIT
HKSTDQNAVKVIHNESPELFVSNGQQLEITVTSSYLQIGAKKTDFQTPFP
LTVNLVLMGGVDKPSLYIKTVSTTAMSGCLQAVKFGNNFLTNQAIPSSFT
VSVIIPDSEPGFQLGCPGTPVCDSKPCLYNGTCVDQWNDFTCQCSEGFGG
KTCSEFGCTLNDTCPASSGYCYDVPLSSPPATKCKFFEFWFLSLALYNCG
MNQTSSRSPDTFFHWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028627XLOC_028627Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045042TCONS_00045042Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR013320ConA-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 222..254
e-value: 0.0046
score: 20.7
IPR000742EGF-like domainSMARTSM00181egf_5coord: 221..254
e-value: 3.2E-4
score: 30.0
IPR000742EGF-like domainPFAMPF00008EGFcoord: 222..252
e-value: 5.9E-8
score: 32.8
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 218..254
score: 17.983
NoneNo IPR availableGENE3D2.60.120.200coord: 28..204
e-value: 2.2E-4
score: 20.7
NoneNo IPR availableGENE3D2.60.120.200coord: 247..313
e-value: 0.019
score: 14.0
NoneNo IPR availableGENE3D2.10.25.10coord: 220..246
e-value: 9.7E-11
score: 41.2
NoneNo IPR availableCDDcd00054EGF_CAcoord: 222..253
e-value: 8.40726E-8
score: 46.861
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 220..254
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 242..253
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 242..253
IPR000152EGF-type aspartate/asparagine hydroxylation sitePROSITEPS00010ASX_HYDROXYLcoord: 233..244
IPR013320Concanavalin A-like lectin/glucanase domainSUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 50..194

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045042-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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