|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044870 ID=TCONS_00044870|Name=TCONS_00044870|organism=Clytia hemisphaerica|type=transcript|length=1165bp
aaaagaattattcaatttatttcaaattcatAAACAGTGATAAATGTAAG
ATAAAGACACAATATAAGTTCTTTCCAGGTCCAATCACCGAAATTGCGGC
CATCAAATGCTCTGCATCGACGACACTGCCTCTTTTTAATCTTCCCATTC
AAGGTCGTGATAATCAGGGAAATAAAGGGTCGTCAATTCTTCGTACGCCC
GTAAACTTTCCTCGTCGTTTAAACAAAATATGATTCTCTCGacctaaaaa
tgaaacaaagtcCCTCGTTAATGTTATCAAATAATAATTTAAATTAGGTC
GACAAAAATGACCGAAAAGGGTCTGATGTTTTTTAACTGAGAATTTTCAT
ACGCTCCATTAATTAATTCCATTAATTTTCGCGCTCCTATTTCTTTCCAC
CGTAATTTTTGTGCAGCTGGCAAAATAGAATATTTGCGCATCTTTTTATT
TTCACGCATCTTGCAGTTTCTGGAatatttttgagtgtttttgacGATTT
GAATTGAGTTTCACTTATTTTCAGTGCGTATTCAAGCTAGAATTAGATTT
TACATCCCAGAGGCATATTTCTCATGAATCGAGGTCCCATTTTATTAAAA
GCCCTAAGATAAGATTTCTACACGTTCAAAGCGATTACTNTTTACATCCC
AGAGGCATATTTCTCATGAATCGAGGTCCCATTTTATTAAAAGCCCTAAG
ATAAGATTTCTACACGTTCAAAGCGATTACTAATTCGTATAccctttaat
tttcgcgtggCCAAGTGCCCGAAAACCAATGGTATTAAGGTATGCTAAAT
TTAAGTCACATGTTCTTTATTCAGGGTGTATTTCTACAGGACAACCTGGT
GAACAGGAGAAGAATAAAGCCCTAAATCAGCAAgtgtaataaaaaaagaa
tattgTTTAAAATTACTCACTATCGCTAATTCAAGATTATTTCGGTCCAC
TATTGTTATCTGTCTTGTTTCTTTCTGTCAACAAATCGAAAAAGGAGGGA
TTCAAATACCCACGTCTCACACAATTAAAGAAATCAGCAAATAAGTCGCC
CAATTAAGAAAATACCTCCATCTTCACTGGGAAATGTTTAGAGAATCTTC
ATTGTATTTCAAGCTGTTAAAGAATAAAaggacgtcagcaaaaatttaaa
atgctaATTACtcct Run BLAST on NCBI transcript from alignment at sc0006359:813..1977 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044870 ID=TCONS_00044870|Name=TCONS_00044870|organism=Clytia hemisphaerica|type=transcript|length=1165bp|location=Sequence derived from alignment at sc0006359:813..1977 (Clytia hemisphaerica)
aggaGTAATtagcattttaaatttttgctgacgtcctTTTATTCTTTAAC
AGCTTGAAATACAATGAAGATTCTCTAAACATTTCCCAGTGAAGATGGAG
GTATTTTCTTAATTGGGCGACTTATTTGCTGATTTCTTTAATTGTGTGAG
ACGTGGGTATTTGAATCCCTCCTTTTTCGATTTGTTGACAGAAAGAAACA
AGACAGATAACAATAGTGGACCGAAATAATCTTGAATTAGCGATAGTGAG
TAATTTTAAAcaatattctttttttattacacTTGCTGATTTAGGGCTTT
ATTCTTCTCCTGTTCACCAGGTTGTCCTGTAGAAATACACCCTGAATAAA
GAACATGTGACTTAAATTTAGCATACCTTAATACCATTGGTTTTCGGGCA
CTTGGccacgcgaaaattaaagggTATACGAATTAGTAATCGCTTTGAAC
GTGTAGAAATCTTATCTTAGGGCTTTTAATAAAATGGGACCTCGATTCAT
GAGAAATATGCCTCTGGGATGTAAANAGTAATCGCTTTGAACGTGTAGAA
ATCTTATCTTAGGGCTTTTAATAAAATGGGACCTCGATTCATGAGAAATA
TGCCTCTGGGATGTAAAATCTAATTCTAGCTTGAATACGCACTGAAAATA
AGTGAAACTCAATTCAAATCgtcaaaaacactcaaaaatatTCCAGAAAC
TGCAAGATGCGTGAAAATAAAAAGATGCGCAAATATTCTATTTTGCCAGC
TGCACAAAAATTACGGTGGAAAGAAATAGGAGCGCGAAAATTAATGGAAT
TAATTAATGGAGCGTATGAAAATTCTCAGTTAAAAAACATCAGACCCTTT
TCGGTCATTTTTGTCGACCTAATTTAAATTATTATTTGATAACATTAACG
AGGgactttgtttcatttttaggtCGAGAGAATCATATTTTGTTTAAACG
ACGAGGAAAGTTTACGGGCGTACGAAGAATTGACGACCCTTTATTTCCCT
GATTATCACGACCTTGAATGGGAAGATTAAAAAGAGGCAGTGTCGTCGAT
GCAGAGCATTTGATGGCCGCAATTTCGGTGATTGGACCTGGAAAGAACTT
ATATTGTGTCTTTATCTTACATTTATCACTGTTTatgaatttgaaataaa
ttgaataattctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044870-exon-sc0006359-1491911889:813..1977 | TCONS_00044870-exon-sc0006359-1491911889:813..1977 | Clytia hemisphaerica | exon |
| TCONS_00044870-exon-sc0006359-1510915933:813..1977 | TCONS_00044870-exon-sc0006359-1510915933:813..1977 | Clytia hemisphaerica | exon |
| TCONS_00044870-exon-sc0006359-1575043694:813..1977 | TCONS_00044870-exon-sc0006359-1575043694:813..1977 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006359 | supercontig | sc0006359:813..1977 . |
Blast
The following BLAST results are available for this feature:
|
