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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044858 ID=TCONS_00044858|Name=TCONS_00044858|organism=Clytia hemisphaerica|type=transcript|length=1357bp
attttgagagaaaCGATGTTTCCAGCGAttgaaaaaagctggaaaagcag
gTTCTCAACAATTTCGCACGGAAAATTAATTATGCATGCGCATCATTAAG
TGATAATTATAATTCGTACGTCTttaaatacaattcaaaattcTAAATCA
TCCTCGCTATTGCATTCACTCAAATCACATTTTAACATACACACATGTCA
GAGAGATGGCTGATGGTGCTATTAATTACGAACAGTTGAAGGTGGTTGTG
AAAGAAATCATTCAAACAGAGTTGAGACCTCAAGTCTTAAACGTAGCAGA
AGAAAGAGCGCAACAAGTTGCAGATCAAACCTCTGTAACAAATTCAAATA
CATTAACAAAATTAAAGGAAAagcttgaaaataaaagaaaaagcgacAAT
GTTACTTTTTCAAAGGCTGGACACCTCGATCAGTTCAAACATAATACAGA
AGTTTTGGATAAGATTGATGATGCCCTTGAAGCTATCGAAACAACGGACG
TGGAAGGAATAACAACTGCTTTAAAGAAAGGTAAGCAATTACTTGAAACC
AGGATAAAGCATTTAAGGATCGCCGATGCCTACGGTTGGCTAACAGTTAA
GGAATTTAAAGCTAATGAATTGACATCTGGGGAGGCAGAGGAGTTAAAAG
ACTAAAGAGAGCAATAAAAAACGCAGAGATTGTCAAAGgccgtttttata
aaaaacaaaaactttccgATGATTCAGATTACAATAAAGTAATAAGAAAT
AAAACCGAACAAAGAAGTCGCATGGACGAAATAGTATGCTACTCCTGTAA
ACGTGTTGGACATTACGTATCGCACTGTCCCTTTTCGAATATAGTATCGC
CTTCGTCTCTCGCATATTCAACAAAATCACATTCATCGTcatcaacaaat
aaaaattcGTCAAGTTCTTCAAAAAGCTCGAGAGACGGTAAAAGTACCTC
CGGATAAAAATATTCGTTATCACTTTAAATTTCACAGTCAAGTTGCTTAC
TCGTGTTGAAAAATTGTGAAGCGTTATAATTCAAACGACTTTCCTTAGta
ttattttatcttttatgAACAATTAAATTCATTGTGCTTGACGTACTTTA
ATCAAAAGACAGTAATTTCGAATAATGAAATTCATTGTGTTTAATGTACT
TTAACCAAAGGACAGTCATTTCAATTTATTAAATTTATATACATGAACAA
CACTTAAACGTGTAGAATGTAATTCAAATTTGTGTAACATCGTTGTTTTC
TAAATAACTTTCGCCAATTTGATATCAagtttttgttcgttttttcgCTT
CTCCAGAGAGATTTTGGGAATTTGAGCAATCTTCCGAAAGCGTCTCCGTT
GCTGGta Run BLAST on NCBI transcript from alignment at sc0006331:40..1396+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044858 ID=TCONS_00044858|Name=TCONS_00044858|organism=Clytia hemisphaerica|type=transcript|length=1357bp|location=Sequence derived from alignment at sc0006331:40..1396+ (Clytia hemisphaerica)
attttgagagaaaCGATGTTTCCAGCGAttgaaaaaagctggaaaagcag
gTTCTCAACAATTTCGCACGGAAAATTAATTATGCATGCGCATCATTAAG
TGATAATTATAATTCGTACGTCTttaaatacaattcaaaattcTAAATCA
TCCTCGCTATTGCATTCACTCAAATCACATTTTAACATACACACATGTCA
GAGAGATGGCTGATGGTGCTATTAATTACGAACAGTTGAAGGTGGTTGTG
AAAGAAATCATTCAAACAGAGTTGAGACCTCAAGTCTTAAACGTAGCAGA
AGAAAGAGCGCAACAAGTTGCAGATCAAACCTCTGTAACAAATTCAAATA
CATTAACAAAATTAAAGGAAAagcttgaaaataaaagaaaaagcgacAAT
GTTACTTTTTCAAAGGCTGGACACCTCGATCAGTTCAAACATAATACAGA
AGTTTTGGATAAGATTGATGATGCCCTTGAAGCTATCGAAACAACGGACG
TGGAAGGAATAACAACTGCTTTAAAGAAAGGTAAGCAATTACTTGAAACC
AGGATAAAGCATTTAAGGATCGCCGATGCCTACGGTTGGCTAACAGTTAA
GGAATTTAAAGCTAATGAATTGACATCTGGGGAGGCAGAGGAGTTAAAAG
ACTAAAGAGAGCAATAAAAAACGCAGAGATTGTCAAAGgccgtttttata
aaaaacaaaaactttccgATGATTCAGATTACAATAAAGTAATAAGAAAT
AAAACCGAACAAAGAAGTCGCATGGACGAAATAGTATGCTACTCCTGTAA
ACGTGTTGGACATTACGTATCGCACTGTCCCTTTTCGAATATAGTATCGC
CTTCGTCTCTCGCATATTCAACAAAATCACATTCATCGTcatcaacaaat
aaaaattcGTCAAGTTCTTCAAAAAGCTCGAGAGACGGTAAAAGTACCTC
CGGATAAAAATATTCGTTATCACTTTAAATTTCACAGTCAAGTTGCTTAC
TCGTGTTGAAAAATTGTGAAGCGTTATAATTCAAACGACTTTCCTTAGta
ttattttatcttttatgAACAATTAAATTCATTGTGCTTGACGTACTTTA
ATCAAAAGACAGTAATTTCGAATAATGAAATTCATTGTGTTTAATGTACT
TTAACCAAAGGACAGTCATTTCAATTTATTAAATTTATATACATGAACAA
CACTTAAACGTGTAGAATGTAATTCAAATTTGTGTAACATCGTTGTTTTC
TAAATAACTTTCGCCAATTTGATATCAagtttttgttcgttttttcgCTT
CTCCAGAGAGATTTTGGGAATTTGAGCAATCTTCCGAAAGCGTCTCCGTT
GCTGGta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044858-exon-sc0006331-1491911889:40..1396 | TCONS_00044858-exon-sc0006331-1491911889:40..1396 | Clytia hemisphaerica | exon |
| TCONS_00044858-exon-sc0006331-1510915933:40..1396 | TCONS_00044858-exon-sc0006331-1510915933:40..1396 | Clytia hemisphaerica | exon |
| TCONS_00044858-exon-sc0006331-1575043694:40..1396 | TCONS_00044858-exon-sc0006331-1575043694:40..1396 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006331 | supercontig | sc0006331:40..1396 + |
Blast
The following BLAST results are available for this feature:
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