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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044624 ID=TCONS_00044624|Name=TCONS_00044624|organism=Clytia hemisphaerica|type=transcript|length=1420bp
cttttattggcccagcgcgcTTGCGAAGGGGCCTTTCAAGAGGAACTTtc
cgtgtgtctgtctgtcCTGTCCTGTCTGTCCGCAGTCCGTGCCGTGTTCT
GTTTTTCTGTCCTCTCACTTCTATCCGTGCTGTGTTTGCTCCTTGCACtc
tcttttctattttgtaagcTTTCGCGCTCTTTACATTTACAACTTCAACA
CCAGGCGCTTCGACTCCTTCCTTGGAAACATGAAGAAGAAGTTTGGGAAT
GAACTTGTTCCTTCAAAGACTTTGTGCATTAGGACATCCTGATGAATCAG
TCTAAAATTCACACTGCAGACACGTTTTGCCACTTATAAATATTTACATA
CGTTTGCTGTTATTTGATCCATATTAATATTTTGTCATATCCATATTGTT
GCTGATCGACCAGTAATTCTTCATATTATTCATCAGCTATCACTGTTATT
GGAATTATCCAAGCTGCAAGGTATGTAAATGTGTTATTATACTGTTGCTA
ATGAATCGAAAGTTTAGCTTTATAGTTTGATTAAAACTGTTTTCTCAAGA
AGTCCATCATATTTTGTAACCTTCTGGTGGAAAAGCTTTCACTTAAGATC
GCCAATAGAGCACACTGTGCGTTTTACATACAGTATGTAGCTTAATCGAG
CAACCAGTGACTGTCTGAAAAACCGCTATTTTACTTACAGGCGCTCGATC
GGGCAAGTCAAAAATTTGTGTCGGGCAACCATCATGCATCAATAATATGT
TCTGTTCACGTTgcccgattttcaaaacataaatcccAAGTCGGCCCAAT
CACaatgtcagaaaattttttgaatagccAAGCCCTTTTCTACATCACCA
TTCGCTTCAAgttttcacttcacccaccacACCACAGCACAGATGATGTT
ACGCAAGGAAATCGTCACAAGCCATAATGCGCGTTcagcagattttgaaa
atgaaagtgtaaAGAATAAACATTGCTGAAACGAGTTTAAAACGCGGGTA
AAAAGTCCTTGGCTGGTTTGTGAgcctttgaaatttgtttattttgtatt
ctGATTGCTCTCTCATGATGCCccgccattatgaaatttttttttgtgtc
tGCTAAATGCAATTTTGGGATACTTTGCATTACCAACTTTTGCTTGCGGC
AAACACTTTGCCACATTGAGTCccatttaagttttttttcgtCCACCTTC
ATTGAAATTATCAACTTGAAATTCACTGACATGATCGAGCCAACTGACTG
GATTTGGGGATATTTTATAACGCAAACGGAACATATTATTGATATACGCT
TAAGCAACAACCAGCAGCAAgacagaaaaatttaaacacaGATTCTGTCC
TTGCATCTTTGAAAATGGCTGATAGAACTAAACAAGGATTGACAACCAGC
TTATTAGCGTTTTTTGATTG Run BLAST on NCBI transcript from alignment at sc0005898:1548..2967- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044624 ID=TCONS_00044624|Name=TCONS_00044624|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at sc0005898:1548..2967- (Clytia hemisphaerica)
CTTTTATTGGCCCAGCGCGCTTGCGAAGGGGCCTTTCAAGAGGAACTTTC
CGTGTGTCTGTCTGTCCTGTCCTGTCTGTCCGCAGTCCGTGCCGTGTTCT
GTTTTTCTGTCCTCTCACTTCTATCCGTGCTGTGTTTGCTCCTTGCACTC
TCTTTTCTATTTTGTAAGCTTTCGCGCTCTTTACATTTACAACTTCAACA
CCAGGCGCTTCGACTCCTTCCTTGGAAACATGAAGAAGAAGTTTGGGAAT
GAACTTGTTCCTTCAAAGACTTTGTGCATTAGGACATCCTGATGAATCAG
TCTAAAATTCACACTGCAGACACGTTTTGCCACTTATAAATATTTACATA
CGTTTGCTGTTATTTGATCCATATTAATATTTTGTCATATCCATATTGTT
GCTGATCGACCAGTAATTCTTCATATTATTCATCAGCTATCACTGTTATT
GGAATTATCCAAGCTGCAAGGTATGTAAATGTGTTATTATACTGTTGCTA
ATGAATCGAAAGTTTAGCTTTATAGTTTGATTAAAACTGTTTTCTCAAGA
AGTCCATCATATTTTGTAACCTTCTGGTGGAAAAGCTTTCACTTAAGATC
GCCAATAGAGCACACTGTGCGTTTTACATACAGTATGTAGCTTAATCGAG
CAACCAGTGACTGTCTGAAAAACCGCTATTTTACTTACAGGCGCTCGATC
GGGCAAGTCAAAAATTTGTGTCGGGCAACCATCATGCATCAATAATATGT
TCTGTTCACGTTGCCCGATTTTCAAAACATAAATCCCAAGTCGGCCCAAT
CACAATGTCAGAAAATTTTTTGAATAGCCAAGCCCTTTTCTACATCACCA
TTCGCTTCAAGTTTTCACTTCACCCACCACACCACAGCACAGATGATGTT
ACGCAAGGAAATCGTCACAAGCCATAATGCGCGTTCAGCAGATTTTGAAA
ATGAAAGTGTAAAGAATAAACATTGCTGAAACGAGTTTAAAACGCGGGTA
AAAAGTCCTTGGCTGGTTTGTGAGCCTTTGAAATTTGTTTATTTTGTATT
CTGATTGCTCTCTCATGATGCCCCGCCATTATGAAATTTTTTTTTGTGTC
TGCTAAATGCAATTTTGGGATACTTTGCATTACCAACTTTTGCTTGCGGC
AAACACTTTGCCACATTGAGTCCCATTTAAGTTTTTTTTCGTCCACCTTC
ATTGAAATTATCAACTTGAAATTCACTGACATGATCGAGCCAACTGACTG
GATTTGGGGATATTTTATAACGCAAACGGAACATATTATTGATATACGCT
TAAGCAACAACCAGCAGCAAGACAGAAAAATTTAAACACAGATTCTGTCC
TTGCATCTTTGAAAATGGCTGATAGAACTAAACAAGGATTGACAACCAGC
TTATTAGCGTTTTTTGATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044624-exon-sc0005898-1575043694:1548..2967 | TCONS_00044624-exon-sc0005898-1575043694:1548..2967 | Clytia hemisphaerica | exon |
| TCONS_00044624-exon-sc0005898-1510915933:1548..2967 | TCONS_00044624-exon-sc0005898-1510915933:1548..2967 | Clytia hemisphaerica | exon |
| TCONS_00044624-exon-sc0005898-1491911889:1548..2967 | TCONS_00044624-exon-sc0005898-1491911889:1548..2967 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005898 | supercontig | sc0005898:1548..2967 - |
Blast
The following BLAST results are available for this feature:
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