TCONS_00044566 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044566
Unique NameTCONS_00044566
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044566 ID=TCONS_00044566|Name=TCONS_00044566|organism=Clytia hemisphaerica|type=transcript|length=165bp
NTTTCAATAGTTTAGTAAAAGCATTATCTGAAAGGTTAGAACCAATTTTA
ATAGATTTAGAAATACCTTTCACATTTTTCTGAGCTGTTAAAGCAAAACT
TCCTATACACACACGATATGCCTCTATAGATATCATATTGCAATTCTGTA
AGCTTTAGCAAAAGT
Run BLAST on NCBI

transcript from alignment at sc0005799:2829..2993

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044566 ID=TCONS_00044566|Name=TCONS_00044566|organism=Clytia hemisphaerica|type=transcript|length=165bp|location=Sequence derived from alignment at sc0005799:2829..2993 (Clytia hemisphaerica)
ACTTTTGCTAAAGCTTACAGAATTGCAATATGATATCTATAGAGGCATAT
CGTGTGTGTATAGGAAGTTTTGCTTTAACAGCTCAGAAAAATGTGAAAGG
TATTTCTAAATCTATTAAAATTGGTTCTAACCTTTCAGATAATGCTTTTA
CTAAACTATTGAAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028185XLOC_028185Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044566-exon-sc0005799-1491911889:2829..2993TCONS_00044566-exon-sc0005799-1491911889:2829..2993Clytia hemisphaericaexon
TCONS_00044566-exon-sc0005799-1510915933:2829..2993TCONS_00044566-exon-sc0005799-1510915933:2829..2993Clytia hemisphaericaexon
TCONS_00044566-exon-sc0005799-1575043694:2829..2993TCONS_00044566-exon-sc0005799-1575043694:2829..2993Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005799supercontigsc0005799:2829..2993 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044566 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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