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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044550 ID=TCONS_00044550|Name=TCONS_00044550|organism=Clytia hemisphaerica|type=transcript|length=361bp
gatttttcacataattctctttttgttaaatttggcggggatttaatttg
gcgaattgccgaatttggaaattttggcgaggatttaatttNAAAACAAT
AGATATTATTtctaaagaatatttttttttcagtcaaaagcATGTCCCAA
TTTGTGAGCAAGTCGTCAAAATGTTCCCAAAGTTGAATTTTGTCATCGAT
CATATGTCAAAGCCGTCCATCGATCAGAATGATTTGGATTCTTGGTCAGA
GAACATGAAAGAATTAGCTGCCTATCCGAATGTACATTGTAAAATATCTG
GCCTTTCGATACATGCAGATTCAAGCAAGCCACTCGCACCACAAATCACA
CCATATATTAA Run BLAST on NCBI transcript from alignment at sc0005763:280..2300+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044550 ID=TCONS_00044550|Name=TCONS_00044550|organism=Clytia hemisphaerica|type=transcript|length=2021bp|location=Sequence derived from alignment at sc0005763:280..2300+ (Clytia hemisphaerica)
gatttttcacataattctctttttgttaaatttggcggggatttaatttg
gcgaattgccgaatttggaaattttggcgaggatttaatttNAAAACAAT
AGATATTATTtctaaagaatatttttttttcagtcaaaagcATGTCCCAA
TTTGTGAGCAAGTCGTCAAAATGTTCCCAAAGTAAGTTGCTTCAATTCCA
ACACTAGCGAGCTGTTTGGACCGAGTTAGATTCGTTGAAGATTTTATATG
CACTCTTTTGATAGTTATCCCTAATGCTGGAATACTTGAACTGTAAGTCC
GATATGTCAATCAGAATCTCTTTTCGAAATAAATGTTAAATAATAGTATG
ATTTTTCATCACGATTGAATTTGGATTGAATTTGGATTATGTTAAATTTG
ATGCAAATGTTTGctgcgaccgtagtgcagtggtagagcatccggctacg
gtgccgggtcataccaaagattcccaaaaaggtacttgatgcctctccgC
TCGataatgctcagcaattaagagaaggatcaagggtaaaaggagcaatc
cagggagaaaaagTGGCGTNAGCTCCGCTCGataatgctcagcaattaag
aaaaggatcaagggtaaaaGGAGCAATCTAGGGAGGAAGAGTGGCGTATT
CCCCTACCcttgggtagatagctatcgaaagaagaaccttcgggtcgcct
ccgactgcggtcgaaAACCTACTTCTTGATGTAGGTTTAAGCTCCCCTGG
GATCCAATTAATCAAATTTACTTATCGCTGGGCTTCTTAGTGTGACCCAA
AGGTGACACAAATCTCTAATGTAAATTTCATTTTAGGTTGAATTTTGTCA
TCGATCATATGTCAAAGCCGTCCATCGATCAGAATGATTTGGATTCTTGG
TCAGAGAACATGAAAGAATTAGCTGCCTATCCGAATGTACATTGTAAAAT
GTAAGATCATGCCTCATAATGAAACTTGATTTATCATGTGCGTAATGTAA
TGATGAGTGTAAGACGTCATCATTGGTTGTAATTGTCAGTGAACTTCGAT
ATTTGAAATTGACCAGTGGTAGATATTGATAATTGAAGATGattcacaaa
attttgcttcagccacctgtctggttggtattttacagaccagaatgtaa
acttgaccaaaatcatattttgactgattgactcgtttgatttgactgaa
atttgatccTGAATActgatttgtcaaataaaagagactaGTAACAGAAG
AAATTTGTTCCCATgagtatttggtactttgcagaccggtctgtaaaata
cacgttgacCACATGCTGGAACTCAGGAATTACTGcagcttttgacttga
aattttcaccagtgataGATATCTCAAACAGTgagcaaaatttcaattta
gtcaCGAGAtcggttggtattttacagaccggttcgttttttacctaaaa
tgctcactttcacTATAACAcgattttaccgaaattttggCTGTAAGCTT
GTATCATCAAGACCTAAcacttgtcaaaatttcaagttaataGCATTTTC
CCATTACTAGATGCAGTATCCTCGGGCTGTTTAGGCTAAAAAGGCAATTT
TGggccagtctgtaaaatacacgataaCAACAGGTGGCAAAAAATCGACC
CTCTGCCCCAAAATAAATGTCACGTTGAGTTACCTCACAAAATTTGAGTA
AAATATCAAAGTgatttattttcgttttttttcaaagaatgatgacgtca
ttaggtGGCAATGACGCCATCAATGATGCCGAAATTTTCACCGAAGATTC
ATATTTAGTGCACacttggaaaatgttaagttattttgataaatatttca
aaagctaTAAAAAATCGTTTTGGGGGAGCCTCTTTGCCCCCTTCCCCCta
gatgctcgaagggttaagCTAACATTACATTGTGTAATTTCTTTGATTGT
TTCAGATCTGGCCTTTCGATACATGCAGATTCAAGCAAGCCACTCGCACC
ACAAATCACACCATATATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044550-exon-sc0005763-1491911889:280..460 | TCONS_00044550-exon-sc0005763-1491911889:280..460 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1510915933:280..460 | TCONS_00044550-exon-sc0005763-1510915933:280..460 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1575043694:280..460 | TCONS_00044550-exon-sc0005763-1575043694:280..460 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1491911889:1116..1229 | TCONS_00044550-exon-sc0005763-1491911889:1116..1229 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1510915933:1116..1229 | TCONS_00044550-exon-sc0005763-1510915933:1116..1229 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1575043694:1116..1229 | TCONS_00044550-exon-sc0005763-1575043694:1116..1229 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1491911889:2235..2300 | TCONS_00044550-exon-sc0005763-1491911889:2235..2300 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1510915933:2235..2300 | TCONS_00044550-exon-sc0005763-1510915933:2235..2300 | Clytia hemisphaerica | exon |
| TCONS_00044550-exon-sc0005763-1575043694:2235..2300 | TCONS_00044550-exon-sc0005763-1575043694:2235..2300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005763 | supercontig | sc0005763:280..2300 + |
Blast
The following BLAST results are available for this feature:
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