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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044498 ID=TCONS_00044498|Name=TCONS_00044498|organism=Clytia hemisphaerica|type=transcript|length=1391bp
TTTAAAAAGGTGTGttgctacatgtttttttataagcattgcacttgtaa
gcatatctaggctcagatatggggaaaattaagcatatgctaaagcatta
ccttgagcctacgaaaaaagtataagctactttgtagtatagctacttta
tttttttgtgaagctATTGCAAAGTTAATCGAatgtttaaattaaaaaat
tcgaatgtttcataagaattcgaatgtttataaaaactttgaatgtTTAC
TGTATGTAATTTATGTTAAGATTAAGCAACCTTCAAGCattctctgagcc
tgtttttggatttttatatgcctataaaaagacaaatttatTCTATGCAA
CATTTCAAGTTAAAGCTTTCAATTTAAAATTGCGATTCAAAATAGTGATT
TAGGTGTACTTTTTTGCTTGACGTGTTGATAGGGGGGGGGGTTTTCAGGG
GTCtcaaataccgtcataccgacaaaaatttgggtcaaataccgtagtAC
CGTCGATAAAAGAAGCCGAATTACCTAAATACCGATACcagtagaaaatg
aaataccgtaatcccgtcgtttttttctagtaataccgatttaccgggga
aaaaaaggcccaataccgtcgtaccgtaaaagtgaaaaccccccTTGATA
TGTTTAGTTGAAGAACCCAGTATGCAGTAAGATAAAAATTAAACGCTAAA
AAGTTGCCACTATCAAGCTATTTTGCTGCTATTTTTTGGAGTCATTGCGG
GAAATTTCTCCGCTGCCAATAGATATTTTGTTATAGATGCAATGTCATGT
TCCGAAAATCCAGTCCAGTGAGGGCCTCATaaaccaaacaacaaaacatt
gAATAAGGTTTATTTGAAGTAAACAAATCCTTTAATTCACATTTATTAAT
TGTCCGTCCAGCTGTCAAGTATCGTCCCTCAAACATCAATAATAATCATA
TCCAGATATCATAACATACTTTTTTATCATCTTGAACAAGTTGTTTTAGC
TGACTTGATTATGCTGGGTATGGCTGTTCTAGCTGATCCATTCCAgatct
tgaatcttgaatttAGGAAAATCAGTTCTCAAAGTTCAAAACAGCGAATC
TAGTAGCTAGccagtttcaaaatttgaagaatcacAGTTCCTGCATTGCA
TATATCTATTCTGTTTTACTCTGTGTGTTTTTGGTAGCTGCAATGCAAGC
AGTCACATCACAATCAATTCTGATATCAATACAATCAATAAAACCATCAT
GATATGGCTGGTGCTGGTGGGAGGGAGGAGTTAGCCTATTTTGAATATTC
TGCTTCTTGATATTTGTCGGTTTGTTGGATGAAAAAACACCAGGATGAAA
AACAGCAGTACTTTTAATGTTATTGATAATTTCAAAGCAAA Run BLAST on NCBI transcript from alignment at sc0005687:814..2204 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044498 ID=TCONS_00044498|Name=TCONS_00044498|organism=Clytia hemisphaerica|type=transcript|length=1391bp|location=Sequence derived from alignment at sc0005687:814..2204 (Clytia hemisphaerica)
TTTGCTTTGAAATTATCAATAACATTAAAAGTACTGCTGTTTTTCATCCT
GGTGTTTTTTCATCCAACAAACCGACAAATATCAAGAAGCAGAATATTCA
AAATAGGCTAACTCCTCCCTCCCACCAGCACCAGCCATATCATGATGGTT
TTATTGATTGTATTGATATCAGAATTGATTGTGATGTGACTGCTTGCATT
GCAGCTACCAAAAACACACAGAGTAAAACAGAATAGATATATGCAATGCA
GGAACTgtgattcttcaaattttgaaactggCTAGCTACTAGATTCGCTG
TTTTGAACTTTGAGAACTGATTTTCCTaaattcaagattcaagatcTGGA
ATGGATCAGCTAGAACAGCCATACCCAGCATAATCAAGTCAGCTAAAACA
ACTTGTTCAAGATGATAAAAAAGTATGTTATGATATCTGGATATGATTAT
TATTGATGTTTGAGGGACGATACTTGACAGCTGGACGGACAATTAATAAA
TGTGAATTAAAGGATTTGTTTACTTCAAATAAACCTTATTcaatgttttg
ttgtttggtttATGAGGCCCTCACTGGACTGGATTTTCGGAACATGACAT
TGCATCTATAACAAAATATCTATTGGCAGCGGAGAAATTTCCCGCAATGA
CTCCAAAAAATAGCAGCAAAATAGCTTGATAGTGGCAACTTTTTAGCGTT
TAATTTTTATCTTACTGCATACTGGGTTCTTCAACTAAACATATCAAggg
gggttttcacttttacggtacgacggtattgggcctttttttccccggta
aatcggtattactagaaaaaaacgacgggattacggtatttcattttcta
ctgGTATCGGTATTTAGGTAATTCGGCTTCTTTTATCGACGGTactacgg
tatttgacccaaatttttgtcggtatgacggtatttgaGACCCCTGAAAA
CCCCCCCCCCTATCAACACGTCAAGCAAAAAAGTACACCTAAATCACTAT
TTTGAATCGCAATTTTAAATTGAAAGCTTTAACTTGAAATGTTGCATAGA
ataaatttgtctttttataggcatataaaaatccaaaaacaggctcagag
aatGCTTGAAGGTTGCTTAATCTTAACATAAATTACATACAGTAAacatt
caaagtttttataaacattcgaattcttatgaaacattcgaattttttaa
tttaaacatTCGATTAACTTTGCAATagcttcacaaaaaaataaagtagc
tatactacaaagtagcttatacttttttcgtaggctcaaggtaatgcttt
agcatatgcttaattttccccatatctgagcctagatatgcttacaagtg
caatgcttataaaaaaacatgtagcaaCACACCTTTTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044498-exon-sc0005687-1491911889:814..2204 | TCONS_00044498-exon-sc0005687-1491911889:814..2204 | Clytia hemisphaerica | exon |
| TCONS_00044498-exon-sc0005687-1510915933:814..2204 | TCONS_00044498-exon-sc0005687-1510915933:814..2204 | Clytia hemisphaerica | exon |
| TCONS_00044498-exon-sc0005687-1575043694:814..2204 | TCONS_00044498-exon-sc0005687-1575043694:814..2204 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005687 | supercontig | sc0005687:814..2204 . |
Blast
The following BLAST results are available for this feature:
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