TCONS_00044444 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044444
Unique NameTCONS_00044444
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044444 ID=TCONS_00044444|Name=TCONS_00044444|organism=Clytia hemisphaerica|type=transcript|length=160bp
ctaaacttttgaaacttgtgtgattgttttggttgttttcctgaCTAAAG
ACACTTTTGAATGTGTGATTGTTTTCCCTGACTAGAGATACTGTGAGCGT
GTATTTAATAAACATATTGCATCTTGGCTTGGAgtatatttttgaatgtt
ttaacgGCGA
Run BLAST on NCBI

transcript from alignment at sc0005587:841..1000

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044444 ID=TCONS_00044444|Name=TCONS_00044444|organism=Clytia hemisphaerica|type=transcript|length=160bp|location=Sequence derived from alignment at sc0005587:841..1000 (Clytia hemisphaerica)
TCGCcgttaaaacattcaaaaatatacTCCAAGCCAAGATGCAATATGTT
TATTAAATACACGCTCACAGTATCTCTAGTCAGGGAAAACAATCACACAT
TCAAAAGTGTCTTTAGtcaggaaaacaaccaaaacaatcacacaagtttc
aaaagtttag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028076XLOC_028076Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044444-exon-sc0005587-1491911889:841..1000TCONS_00044444-exon-sc0005587-1491911889:841..1000Clytia hemisphaericaexon
TCONS_00044444-exon-sc0005587-1510915933:841..1000TCONS_00044444-exon-sc0005587-1510915933:841..1000Clytia hemisphaericaexon
TCONS_00044444-exon-sc0005587-1575043694:841..1000TCONS_00044444-exon-sc0005587-1575043694:841..1000Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005587supercontigsc0005587:841..1000 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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