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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044374 ID=TCONS_00044374|Name=TCONS_00044374|organism=Clytia hemisphaerica|type=transcript|length=849bp
tgaaagtggttgagcgatatataggaacttagtcgaccgcgcgcacatta
taccaaaggagacgcgctgcgcgcgtaattaccattttcacaggagtgac
tcttcaatcttagatcatcatcactgtcaaaaaaaatttcaaaaataatc
attcaatcaaaagatatcaaagtttttctcaattttttacttgataatat
tccactcacgaatatcattttaacaagcacttaatcgcaacttgattcga
actctatcaaaagttacagccatttttttctccagctgcaaattatttcg
agacagacttNNNNNTTTTTTATTTactatatttttagaaaaagaaaaca
tttaacAAGTATCAACACTTCAAGTTTGGTATCCCAGTTTTCCATTCTTA
TGGTCATAAAGGAGACTGCCAGGTGAAAAATTCAATAAGGAGATTGGATA
CATTCGGACTGATGGATGGAGAACTAATGGAGAGATTATGGTCTTACCTt
cgatcattttcaaaaataacaaaggaaatGACCCCTGCCCACCGCACAGA
TTTGCTAAGTGATGCACTGATGCATTTTGGCTCTAAAAAAATGGGAAACA
TCGGTATTTGTTACTTTCTAAAACCTTAGCTTCTGTTATTTTGGGTTTTC
AATACGACATGATTTTTGGTGTTGCCACCAAAGTTGTGTTATTTGAAAAT
CATcaacaaaaatgaaacatttccaTACCAAAGTATTGTACAGCCTTAAC
TTGTATTTTCAAACATGTTCAAACATAATGATTTTAGCGGTACTCAAATA
AAGCCACTATGGCTAAAATTCCTGATAAAAGGCCTAAAATGTTAACACA Run BLAST on NCBI transcript from alignment at sc0005475:2990..4260+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044374 ID=TCONS_00044374|Name=TCONS_00044374|organism=Clytia hemisphaerica|type=transcript|length=1271bp|location=Sequence derived from alignment at sc0005475:2990..4260+ (Clytia hemisphaerica)
tgaaagtggttgagcgatatataggaacttagtcgaccgcgcgcacatta
taccaaaggagacgcgctgcgcgcgtaattaccattttcacaggagtgac
tcttcaatcttagatcatcatcactgtcaaaaaaaatttcaaaaataatc
attcaatcaaaagatatcaaagtttttctcaattttttacttgataatat
tccactcacgaatatcattttaacaagcacttaatcgcaacttgattcga
actctatcaaaagttacagccatttttttctccagctgcaaattatttcg
agacagacttNNNNNTTTTTTATTTactatatttttagaaaaagaaaaca
tttaacAAGTATCAACACTTCAAGTTTGGTATCCCAGTTTTCCATTCTTA
TGGTCATAAAGGAGACTGCCAGGTTATTAATATGCTAATGATTTTATATG
ATTTCAAACAGTTTAGTTTTTTCAGTTTGGCCTTTTTCAATTTACTTTGG
ACTTTGTCACAAGTGGACTCTCACCcatttctttcaaatctttgcttttt
gaaagaaatatcCCACGTTTTTACAGATACCTCAAGCTTTTTATAAAGCT
TATAAAAATAAGGTTCTTTGAGAAAGGAGAAGTCTGTATGAATACATTAT
GTAAAACACTTTACTTTGagactttttaaaaatatatccCAGCATCTAGA
ATGACAGATGGGCTTTCTTGAAGTGACTGAGAAAGAGCTACAATGTGATT
TAAAATCTACCAGTTCTTTTATTTACTCCATTAATCGATTATCAGGTCAT
TGTTCCCAACTCATACGTTTCATATTCTTTTTCTTAATTATAAGGTGAAA
AATTCAATAAGGAGATTGGATACATTCGGACTGATGGATGGAGAACTAAT
GGAGAGATTATGGTCTTACCTtcgatcattttcaaaaataacaaaggaaa
tGACCCCTGCCCACCGCACAGATTTGCTAAGTGATGCACTGATGCATTTT
GGCTCTAAAAAAATGGGAAACATCGGTATTTGTTACTTTCTAAAACCTTA
GCTTCTGTTATTTTGGGTTTTCAATACGACATGATTTTTGGTGTTGCCAC
CAAAGTTGTGTTATTTGAAAATCATcaacaaaaatgaaacatttccaTAC
CAAAGTATTGTACAGCCTTAACTTGTATTTTCAAACATGTTCAAACATAA
TGATTTTAGCGGTACTCAAATAAAGCCACTATGGCTAAAATTCCTGATAA
AAGGCCTAAAATGTTAACACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044374-exon-sc0005475-1491911889:2990..3411 | TCONS_00044374-exon-sc0005475-1491911889:2990..3411 | Clytia hemisphaerica | exon |
| TCONS_00044374-exon-sc0005475-1510915933:2990..3411 | TCONS_00044374-exon-sc0005475-1510915933:2990..3411 | Clytia hemisphaerica | exon |
| TCONS_00044374-exon-sc0005475-1575043694:2990..3411 | TCONS_00044374-exon-sc0005475-1575043694:2990..3411 | Clytia hemisphaerica | exon |
| TCONS_00044374-exon-sc0005475-1491911889:3834..4260 | TCONS_00044374-exon-sc0005475-1491911889:3834..4260 | Clytia hemisphaerica | exon |
| TCONS_00044374-exon-sc0005475-1510915933:3834..4260 | TCONS_00044374-exon-sc0005475-1510915933:3834..4260 | Clytia hemisphaerica | exon |
| TCONS_00044374-exon-sc0005475-1575043694:3834..4260 | TCONS_00044374-exon-sc0005475-1575043694:3834..4260 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005475 | supercontig | sc0005475:2990..4260 + |
Blast
The following BLAST results are available for this feature:
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